RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 UHMK1Q8TAS1 419 aaKnown RBP11.81□□□□□ -0.52
MDC1-201ENST00000376406 NUF2Q9BZD4 464 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 NWD1Q149M9 1564 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 TRIM49BA6NDI0 452 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 POC1B-GALNT4F8VUJ3 575 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 CCDC188H7C350 402 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 HOXA13P31271 388 aaPredicted RBP11.81□□□□□ -0.52
MDC1-201ENST00000376406 SLC7A5Q01650 507 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 SNX1Q13596 522 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 MAPK6Q16659 721 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 HHIPL2Q6UWX4 724 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 SLC25A27O95847 323 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 PRELPP51888 382 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 ZMYND12Q9H0C1 365 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 DENND3A2RUS2 1198 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 SART1O43290 800 aaKnown RBP11.81□□□□□ -0.52
MDC1-201ENST00000376406 NMT2O60551 498 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 PALMO75781 387 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 LUC7L3O95232 432 aaKnown RBP11.81□□□□□ -0.52
MDC1-201ENST00000376406 CETPP11597 493 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 COASYQ13057 564 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 CCDC144BQ3MJ40 725 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 SESTD1Q86VW0 696 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 NME8Q8N427 588 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 PPP2R3BQ9Y5P8 575 aa11.81□□□□□ -0.52
MDC1-201ENST00000376406 SH2D4BQ5SQS7 431 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 SNRNP48Q6IEG0 339 aaKnown RBP11.8□□□□□ -0.52
MDC1-201ENST00000376406 ATP6V0A4Q9HBG4 840 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 CPSF2Q9P2I0 782 aaKnown RBP11.8□□□□□ -0.52
MDC1-201ENST00000376406 USH1CQ9Y6N9 552 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 GRID2IPA4D2P6 1211 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 STXBP3O00186 592 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 HOXC6P09630 235 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 CYP27A1Q02318 531 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 IFT88Q13099 833 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 DNAJC24Q6P3W2 148 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 TACC3Q9Y6A5 838 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 SYNGAP1Q96PV0 1343 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 PODXLO00592 558 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 MAP2K2P36507 400 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 YWHAGP61981 247 aaKnown RBP eCLIP11.8□□□□□ -0.529e-7■□□□□ 9.7
MDC1-201ENST00000376406 ADCY2Q08462 1091 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 C6orf118Q5T5N4 469 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 NR1D1P20393 614 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 GPSM2P81274 684 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 COG2Q14746 738 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 CNPY4Q8N129 248 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 TRPV6Q9H1D0 765 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 MAP3K20Q9NYL2 800 aaKnown RBP11.8□□□□□ -0.52
MDC1-201ENST00000376406 GOLGA8QA0A0J9YX86 632 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 GOLGA8OA6NCC3 632 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 GOLGA8NF8WBI6 632 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 STOX1Q6ZVD7 989 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 KCTD6Q8NC69 237 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 RUBCNQ92622 972 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 FAM8A1Q9UBU6 413 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 PRDX5P30044 214 aa11.8□□□□□ -0.52
MDC1-201ENST00000376406 KAT6AQ92794 2004 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 ARHGAP42A6NI28 874 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 WDR46O15213 610 aaKnown RBP11.79□□□□□ -0.52
MDC1-201ENST00000376406 R3HDM1Q15032 1099 aaKnown RBP11.79□□□□□ -0.52
MDC1-201ENST00000376406 ZNF280CQ8ND82 737 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 SCYL1Q96KG9 808 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 AP1M1Q9BXS5 423 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 A0A1W2PQC6 194 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 ALKBH5Q6P6C2 394 aaKnown RBP11.79□□□□□ -0.52
MDC1-201ENST00000376406 CATSPER4Q7RTX7 472 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 CEP95Q96GE4 821 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 MAD1L1Q9Y6D9 718 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 SCINQ9Y6U3 715 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 AFDNP55196 1824 aaKnown RBP11.79□□□□□ -0.52
MDC1-201ENST00000376406 LRRC53A6NM62 1247 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 MSH2P43246 934 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 PSPC1Q8WXF1 523 aaKnown RBP11.79□□□□□ -0.52
MDC1-201ENST00000376406 BHMT2Q9H2M3 363 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 CHD4Q14839 1912 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 POTEMA6NI47 508 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 TNPO2O14787 897 aaKnown RBP11.79□□□□□ -0.52
MDC1-201ENST00000376406 NR3C1P04150 777 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 USP11P51784 963 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 TSPY1Q01534 308 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 TMED2Q15363 201 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 KCTD17Q8N5Z5 321 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 GPR101Q96P66 508 aaPredicted RBP11.79□□□□□ -0.52
MDC1-201ENST00000376406 EHD2Q9NZN4 543 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 BAZ2BQ9UIF8 2168 aaKnown RBP11.79□□□□□ -0.52
MDC1-201ENST00000376406 MTERF2Q49AM1 385 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 FAM83BQ5T0W9 1011 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 BEST2Q8NFU1 509 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 APOL6Q9BWW8 343 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 FBXO2Q9UK22 296 aaPredicted RBP11.79□□□□□ -0.52
MDC1-201ENST00000376406 RWDD2BP57060 319 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 KCNB1Q14721 858 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 NXNQ6DKJ4 435 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 ACTR5Q9H9F9 607 aaPredicted RBP11.79□□□□□ -0.52
MDC1-201ENST00000376406 EFCC1Q9HA90 598 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 LMCD1Q9NZU5 365 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 MRFAP1Q9Y605 127 aa11.79□□□□□ -0.52
MDC1-201ENST00000376406 IFT172Q9UG01 1749 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 CLTAP09496 248 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms