RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 SMARCAL1Q9NZC9 954 aa11.73□□□□□ -0.53
CSMD2-204ENST00000373380 CASQ2O14958 399 aaPredicted RBP11.72□□□□□ -0.53
CSMD2-204ENST00000373380 BRD2P25440 801 aaKnown RBP11.72□□□□□ -0.53
CSMD2-204ENST00000373380 PPM1FP49593 454 aaPredicted RBP11.72□□□□□ -0.53
CSMD2-204ENST00000373380 EIF3BP55884 814 aaKnown RBP11.72□□□□□ -0.53
CSMD2-204ENST00000373380 MMS22LQ6ZRQ5 1243 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 SESTD1Q86VW0 696 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 CCDC125Q86Z20 511 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 RHOT2Q8IXI1 618 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 NME8Q8N427 588 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 RNF169Q8NCN4 708 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 PPP4R1Q8TF05 950 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 FAM149B1Q96BN6 582 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 COA1Q9GZY4 146 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 AS3MTQ9HBK9 375 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 MMEP08473 750 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 AKR1B1P15121 316 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 ZSCAN20P17040 1043 aaPredicted RBP11.72□□□□□ -0.53
CSMD2-204ENST00000373380 GUCY2CP25092 1073 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 PDE1BQ01064 536 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 DCAF15Q66K64 600 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 NXNQ6DKJ4 435 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 DNAJC24Q6P3W2 148 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 SH2D3CQ8N5H7 860 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 NEDD1Q8NHV4 660 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 MORC4Q8TE76 937 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 MS4A14Q96JA4 679 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 ADPGKQ9BRR6 497 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 CCSER1Q9C0I3 900 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 ANAPC7Q9UJX3 599 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 CSADQ9Y600 493 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 BAZ2BQ9UIF8 2168 aaKnown RBP11.72□□□□□ -0.53
CSMD2-204ENST00000373380 KCNB1Q14721 858 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 DRAP1Q14919 205 aaPredicted RBP11.72□□□□□ -0.53
CSMD2-204ENST00000373380 ZNF449Q6P9G9 518 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 FAM47EQ6ZV65 393 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 ADGRF4Q8IZF3 695 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 TMEM60Q9H2L4 133 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 AMACRQ9UHK6 382 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 SNX12Q9UMY4 172 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 GIPC1O14908 333 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 GMNNO75496 209 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 TMEM179Q6ZVK1 233 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 ZBTB33Q86T24 672 aa11.72□□□□□ -0.53
CSMD2-204ENST00000373380 MRPL47Q9HD33 250 aaKnown RBP11.72□□□□□ -0.53
CSMD2-204ENST00000373380 CNOT8Q9UFF9 292 aaKnown RBP11.72□□□□□ -0.53
CSMD2-204ENST00000373380 F5H6K3 240 aa11.71□□□□□ -0.53
CSMD2-204ENST00000373380 OPHN1O60890 802 aa11.71□□□□□ -0.53
CSMD2-204ENST00000373380 HDLBPQ00341 1268 aaKnown RBP11.71□□□□□ -0.53
CSMD2-204ENST00000373380 KLRC3Q07444 240 aa11.71□□□□□ -0.53
CSMD2-204ENST00000373380 C6orf118Q5T5N4 469 aa11.71□□□□□ -0.53
CSMD2-204ENST00000373380 APOL6Q9BWW8 343 aa11.71□□□□□ -0.53
CSMD2-204ENST00000373380 SPZ1Q9BXG8 430 aa11.71□□□□□ -0.53
CSMD2-204ENST00000373380 PFDN4Q9NQP4 134 aa11.71□□□□□ -0.53
CSMD2-204ENST00000373380 COL15A1P39059 1388 aa11.71□□□□□ -0.53
CSMD2-204ENST00000373380 POLE2P56282 527 aa11.71□□□□□ -0.53
CSMD2-204ENST00000373380 AP3B2Q13367 1082 aa11.71□□□□□ -0.53
CSMD2-204ENST00000373380 SCARA5Q6ZMJ2 495 aa11.71□□□□□ -0.53
CSMD2-204ENST00000373380 ARMC9Q7Z3E5 817 aa11.71□□□□□ -0.53
CSMD2-204ENST00000373380 MAP7D3Q8IWC1 876 aa11.71□□□□□ -0.53
CSMD2-204ENST00000373380 TRIM11Q96F44 468 aa11.71□□□□□ -0.53
CSMD2-204ENST00000373380 DDX27Q96GQ7 796 aaKnown RBP11.71□□□□□ -0.53
CSMD2-204ENST00000373380 DYDC2Q96IM9 177 aa11.71□□□□□ -0.53
CSMD2-204ENST00000373380 MXD3Q9BW11 206 aa11.71□□□□□ -0.53
CSMD2-204ENST00000373380 PLA2G12BQ9BX93 195 aa11.71□□□□□ -0.53
CSMD2-204ENST00000373380 MSH2P43246 934 aa11.71□□□□□ -0.54
CSMD2-204ENST00000373380 GUCY1A3Q02108 690 aa11.71□□□□□ -0.54
CSMD2-204ENST00000373380 BIRC2Q13490 618 aa11.71□□□□□ -0.54
CSMD2-204ENST00000373380 DBN1Q16643 649 aa11.71□□□□□ -0.54
CSMD2-204ENST00000373380 SH2D4BQ5SQS7 431 aa11.71□□□□□ -0.54
CSMD2-204ENST00000373380 GADL1Q6ZQY3 521 aa11.71□□□□□ -0.54
CSMD2-204ENST00000373380 C7orf31Q8N865 590 aa11.71□□□□□ -0.54
CSMD2-204ENST00000373380 ARHGEF1Q92888 912 aaKnown RBP11.71□□□□□ -0.54
CSMD2-204ENST00000373380 SH2D3AQ9BRG2 576 aa11.71□□□□□ -0.54
CSMD2-204ENST00000373380 TNS3Q68CZ2 1445 aa11.71□□□□□ -0.54
CSMD2-204ENST00000373380 K7ERI5 159 aa11.7□□□□□ -0.54
CSMD2-204ENST00000373380 MMP10P09238 476 aa11.7□□□□□ -0.54
CSMD2-204ENST00000373380 IFRD2Q12894 506 aaPredicted RBP11.7□□□□□ -0.54
CSMD2-204ENST00000373380 PADI6Q6TGC4 694 aa11.7□□□□□ -0.54
CSMD2-204ENST00000373380 XXYLT1Q8NBI6 393 aa11.7□□□□□ -0.54
CSMD2-204ENST00000373380 NPHP3-ACAD11A0A0J9YXS1 232 aa11.7□□□□□ -0.54
CSMD2-204ENST00000373380 TRIM66O15016 1216 aa11.7□□□□□ -0.54
CSMD2-204ENST00000373380 CRKP46108 304 aa11.7□□□□□ -0.54
CSMD2-204ENST00000373380 PDXDC2PQ6P474 469 aa11.7□□□□□ -0.54
CSMD2-204ENST00000373380 PDXDC1Q6P996 788 aa11.7□□□□□ -0.54
CSMD2-204ENST00000373380 FLAD1Q8NFF5 587 aa11.7□□□□□ -0.54
CSMD2-204ENST00000373380 RGL1Q9NZL6 768 aa11.7□□□□□ -0.54
CSMD2-204ENST00000373380 MAGED2Q9UNF1 606 aaPredicted RBP11.7□□□□□ -0.54
CSMD2-204ENST00000373380 ZRANB2O95218 330 aaKnown RBP eCLIP11.7□□□□□ -0.54
CSMD2-204ENST00000373380 FTLP02792 175 aaPredicted RBP11.7□□□□□ -0.54
CSMD2-204ENST00000373380 MT-ND3P03897 115 aa11.7□□□□□ -0.54
CSMD2-204ENST00000373380 SRGNP10124 158 aa11.7□□□□□ -0.54
CSMD2-204ENST00000373380 PTPAQ15257 358 aa11.7□□□□□ -0.54
CSMD2-204ENST00000373380 PASD1Q8IV76 773 aa11.7□□□□□ -0.54
CSMD2-204ENST00000373380 REXO1L1PQ8IX06 675 aa11.7□□□□□ -0.54
CSMD2-204ENST00000373380 RIOK1Q9BRS2 568 aaKnown RBP11.7□□□□□ -0.54
CSMD2-204ENST00000373380 TAF1DQ9H5J8 278 aaPredicted RBP11.7□□□□□ -0.54
CSMD2-204ENST00000373380 TTC7AQ9ULT0 858 aaPredicted RBP11.7□□□□□ -0.54
CSMD2-204ENST00000373380 ZNF233A6NK53 670 aa11.7□□□□□ -0.54
CSMD2-204ENST00000373380 SLC16A4O15374 487 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms