RNA–Protein interactions for RNA: ENST00000372739.5

SPTAN1-203, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-203ENST00000372739 TBXAS1P24557 533 aaPredicted RBP10.09□□□□□ -0.79
SPTAN1-203ENST00000372739 ARL4CP56559 192 aa10.09□□□□□ -0.79
SPTAN1-203ENST00000372739 TRIP13Q15645 432 aaPredicted RBP10.09□□□□□ -0.79
SPTAN1-203ENST00000372739 ZNF699Q32M78 642 aa10.09□□□□□ -0.79
SPTAN1-203ENST00000372739 TBC1D9BQ66K14 1250 aa10.09□□□□□ -0.79
SPTAN1-203ENST00000372739 IFT43Q96FT9 208 aa10.09□□□□□ -0.79
SPTAN1-203ENST00000372739 PPP1R16BQ96T49 567 aa10.09□□□□□ -0.79
SPTAN1-203ENST00000372739 ZBED2Q9BTP6 218 aa10.09□□□□□ -0.79
SPTAN1-203ENST00000372739 MAGI3Q5TCQ9 1506 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 ADGRL3Q9HAR2 1447 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 MIF4GDA9UHW6 222 aaKnown RBP10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 NR1D1P20393 614 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 CA4P22748 312 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 NR1H3Q13133 447 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 RASGRF1Q13972 1273 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 LRRC31Q6UY01 552 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 TTC30AQ86WT1 665 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 KIFC3Q9BVG8 833 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 TEX12Q9BXU0 123 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 PCDHA6Q9UN73 950 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 PCDHA8Q9Y5H6 950 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 SAMD9LQ8IVG5 1584 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 ERVK-7P63135 1459 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 ZNF189O75820 626 aaPredicted RBP10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 BEST2Q8NFU1 509 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 GCOM2Q9BZD3 368 aaPredicted RBP10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 BHMT2Q9H2M3 363 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 MRPL40Q9NQ50 206 aaKnown RBP10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 SCOCQ9UIL1 159 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 PALLDQ8WX93 1383 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 HSPA4LO95757 839 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 LMNAP02545 664 aaKnown RBP10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 SKIP12755 728 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 SMARCA1P28370 1054 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 SLCO1A2P46721 670 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 RESTQ13127 1097 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 SPARCL1Q14515 664 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 EMBQ6PCB8 327 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 TTC39CQ8N584 583 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 C2orf69Q8N8R5 385 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 ZNF579Q8NAF0 562 aaKnown RBP10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 CDC26Q8NHZ8 85 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 RNF217Q8TC41 542 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 MTRQ99707 1265 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 GINM1Q9NU53 330 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 TEKT2Q9UIF3 430 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 TET3O43151 1660 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 GOLGA8IPA6NC78 632 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 GOLGA8JA6NMD2 632 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 ALKBH5Q6P6C2 394 aaKnown RBP10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 SNX19Q92543 992 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 C2orf40Q9H1Z8 148 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 KLHL8Q9P2G9 620 aaPredicted RBP10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 TRIM33Q9UPN9 1127 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 HUS1O60921 280 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 CSPG5O95196 566 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 PTPN12Q05209 780 aaKnown RBP10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 KRT31Q15323 416 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 FSCBQ5H9T9 825 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 PYGBP11216 843 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 GPC3P51654 580 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 FAM133BQ5BKY9 247 aaKnown RBP10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 AP1M1Q9BXS5 423 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 SLITRK6Q9H5Y7 841 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 ADAM22Q9P0K1 906 aa10.08□□□□□ -0.8
SPTAN1-203ENST00000372739 SFNP31947 248 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 NOP14P78316 857 aaKnown RBP10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 TMEM35BQ8NCS4 154 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 RMDN3Q96TC7 470 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 FAM49AQ9H0Q0 323 aaPredicted RBP10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 NGRNQ9NPE2 291 aaKnown RBP10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 ANAPC7Q9UJX3 599 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 WDR19Q8NEZ3 1342 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 PYGLP06737 847 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 ANGPTL8Q6UXH0 198 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 POLR3CQ9BUI4 534 aaPredicted RBP10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 ABCF3Q9NUQ8 709 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 ERBB3P21860 1342 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 KPNA7A9QM74 516 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 SEC31AO94979 1220 aaKnown RBP10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 CRKP46108 304 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 TFDP2Q14188 446 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 SLC27A3Q5K4L6 730 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 SCHIP1Q9P0W5 487 aaPredicted RBP10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 ADCY10Q96PN6 1610 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 ABCB11O95342 1321 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 UBN2Q6ZU65 1347 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 DENND3A2RUS2 1198 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 COPEO14579 308 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 GH2P01242 217 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 FGGP02679 453 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 SH3RF3Q8TEJ3 882 aaPredicted RBP10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 TRIM62Q9BVG3 475 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 NOVA2Q9UNW9 492 aaKnown RBP10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 METP08581 1390 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 WDR91A4D1P6 747 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 KRT38O76015 456 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 GPC5P78333 572 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 KRT76Q01546 638 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 TAF11Q15544 211 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms