RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ANGEL2Q5VTE6 544 aaKnown RBP14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 MTA3Q9BTC8 594 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 CPVLQ9H3G5 476 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 RNF14Q9UBS8 474 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 AKR1B1P15121 316 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 KRT76Q01546 638 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 NFX1Q12986 1120 aaKnown RBP14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 USP17L6PQ6QN14 398 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 STK36Q9NRP7 1315 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 ASB14A6NK59 587 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 ORC4O43929 436 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 S100BP04271 92 aaPredicted RBP14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 MAN1A1P33908 653 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 BSPRYQ5W0U4 402 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 RAET1EQ8TD07 263 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 NCAPGQ9BPX3 1015 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 LY9Q9HBG7 655 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 ZNF302Q9NR11 478 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 RPS12P25398 132 aaKnown RBP14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 GMPSP49915 693 aaPredicted RBP14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 NEK2P51955 445 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 POLE2P56282 527 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 NOP14P78316 857 aaKnown RBP14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 GOLGA8FQ08AF8 430 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 GOLGA8DPQ0D2H9 430 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 ALS2CLQ60I27 953 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 TLK2Q86UE8 772 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 VSTM4Q8IW00 320 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 NME8Q8N427 588 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 CCDC68Q9H2F9 335 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 MED7O43513 233 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 HEXIM1O94992 359 aaKnown RBP14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 CSF1RP07333 972 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 ANXA13P27216 316 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 SNAPC2Q13487 334 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 TTC1Q99614 292 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 CNOT10Q9H9A5 744 aaKnown RBP14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 RCOR1Q9UKL0 485 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 KCNH4Q9UQ05 1017 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 TNPO2O14787 897 aaKnown RBP14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 LARGE1O95461 756 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 LMNB1P20700 586 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 DDIT3P35638 169 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 SLC12A2P55011 1212 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 HHIPL2Q6UWX4 724 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 KIAA2013Q8IYS2 634 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 RBM46Q8TBY0 533 aaKnown RBP14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 BHMT2Q9H2M3 363 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 GPBP1L1Q9HC44 474 aaPredicted RBP14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 EPB41L5Q9HCM4 733 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 PPP1R9AQ9ULJ8 1098 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 ITSN1Q15811 1721 aa14.32□□□□□ -0.12
RAPGEF1-201ENST00000372189 ENTPD3O75355 529 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 IFNB1P01574 187 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 LMNAP02545 664 aaKnown RBP14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 FKBP3Q00688 224 aaKnown RBP14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 TRIML2Q8N7C3 387 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 NEDD1Q8NHV4 660 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 UHMK1Q8TAS1 419 aaKnown RBP14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 GGA3Q9NZ52 723 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 NXF1Q9UBU9 619 aaKnown RBP14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 JRKLQ9Y4A0 524 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 DSTYKQ6XUX3 929 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 DEFB132Q7Z7B7 95 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 ARMC2Q8NEN0 867 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 COQ7Q99807 217 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 SPATA31D1Q6ZQQ2 1576 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 PEX3P56589 373 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 QRICH1Q2TAL8 776 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 HVCN1Q96D96 273 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 TRIM11Q96F44 468 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 ZNF233A6NK53 670 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 ELF1P32519 619 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 PHKA2P46019 1235 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 TAF1CQ15572 869 aaPredicted RBP14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 C12orf60Q5U649 245 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 FBXO38Q6PIJ6 1188 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 MB21D2Q8IYB1 491 aaPredicted RBP14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 GRAMD1CQ8IYS0 662 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 N4BP2L2Q92802 583 aaPredicted RBP14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 GFM2Q969S9 779 aaKnown RBP14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 EEF2KMTQ96G04 330 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 RPSAP08865 295 aaKnown RBP14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 SFNP31947 248 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 C2orf54Q08AI8 447 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 PTPROQ16827 1216 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 GLE1Q53GS7 698 aaKnown RBP14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 RINT1Q6NUQ1 792 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 SMYD4Q8IYR2 804 aaPredicted RBP14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 PANX2Q96RD6 677 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 MYOZ2Q9NPC6 264 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 MAN1B1Q9UKM7 699 aa14.31□□□□□ -0.12
RAPGEF1-201ENST00000372189 C19orf81C9J6K1 198 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 ADAT2Q7Z6V5 191 aaKnown RBP14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 ARL10Q8N8L6 244 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 MCPH1Q8NEM0 835 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 PAWRQ96IZ0 340 aaKnown RBP14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 SLC12A6Q9UHW9 1150 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms