RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 COPS2P61201 443 aa13.6□□□□□ -0.23
GPC4-201ENST00000370828 DYNLL1P63167 89 aaKnown RBP13.6□□□□□ -0.23
GPC4-201ENST00000370828 ART3Q13508 389 aa13.6□□□□□ -0.23
GPC4-201ENST00000370828 CDC37Q16543 378 aaPredicted RBP13.6□□□□□ -0.23
GPC4-201ENST00000370828 Q4G0T1 1027 aa13.6□□□□□ -0.23
GPC4-201ENST00000370828 ANKRD40Q6AI12 368 aa13.6□□□□□ -0.23
GPC4-201ENST00000370828 ANO5Q75V66 913 aa13.6□□□□□ -0.23
GPC4-201ENST00000370828 RHOT2Q8IXI1 618 aa13.6□□□□□ -0.23
GPC4-201ENST00000370828 PCIF1Q9H4Z3 704 aa13.6□□□□□ -0.23
GPC4-201ENST00000370828 PIH1D3Q9NQM4 214 aaKnown RBP13.6□□□□□ -0.23
GPC4-201ENST00000370828 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.6□□□□□ -0.23
GPC4-201ENST00000370828 DIS3Q9Y2L1 958 aaKnown RBP13.6□□□□□ -0.23
GPC4-201ENST00000370828 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.6□□□□□ -0.23
GPC4-201ENST00000370828 NOP56O00567 594 aaKnown RBP13.59□□□□□ -0.23
GPC4-201ENST00000370828 RIMBP2O15034 1052 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 TTC4O95801 387 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 KRT1P04264 644 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 MFAP3P55082 362 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 PTK2Q05397 1052 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 MKRN3Q13064 507 aaKnown RBP13.59□□□□□ -0.23
GPC4-201ENST00000370828 EFHD1Q9BUP0 239 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 NDEL1Q9GZM8 345 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 MAP2K7O14733 419 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 FDPSP14324 419 aaKnown RBP13.59□□□□□ -0.23
GPC4-201ENST00000370828 KLK7P49862 253 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 MED21Q13503 144 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 ATG16L1Q676U5 607 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 JADE1Q6IE81 842 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 JDP2Q8WYK2 163 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 TNRQ92752 1358 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 STAM2O75886 525 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 KRT19P08727 400 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 KRT4P19013 534 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 KCNH2Q12809 1159 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 UNC13DQ70J99 1090 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 DCLK2Q8N568 766 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.59□□□□□ -0.233e-6■■■■■ 50.8
GPC4-201ENST00000370828 SERPINI1Q99574 410 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 CELF4Q9BZC1 486 aaKnown RBP13.59□□□□□ -0.23
GPC4-201ENST00000370828 STK36Q9NRP7 1315 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 FAM205CA6NFA0 338 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 MIF4GDA9UHW6 222 aaKnown RBP13.59□□□□□ -0.23
GPC4-201ENST00000370828 GOLGA8SH3BPF8 625 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 GOLGA8MH3BSY2 632 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 CHRNA3P32297 505 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 KCNB1Q14721 858 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 TRMT10CQ7L0Y3 403 aaKnown RBP13.59□□□□□ -0.23
GPC4-201ENST00000370828 NT5C1BQ96P26 610 aa13.59□□□□□ -0.23
GPC4-201ENST00000370828 SRGNP10124 158 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 NEK2P51955 445 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 MDH1BQ5I0G3 518 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 CASKIN2Q8WXE0 1202 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 NAF1Q96HR8 494 aaKnown RBP13.58□□□□□ -0.24
GPC4-201ENST00000370828 LY9Q9HBG7 655 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 DNAJC12Q9UKB3 198 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 ATP10AO60312 1499 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 PLEKHG3A1L390 1219 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 RFX6Q8HWS3 928 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 HPS3Q969F9 1004 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 CFAP36Q96G28 342 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 SH3GL2Q99962 352 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 IQANK1A0A1B0GTG1 560 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 TMEM120BA0PK00 339 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 COPEO14579 308 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 TSPAN9O75954 239 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 CCDC159P0C7I6 412 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 PLA2G4BP0C869 781 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 MCF2P10911 925 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 MMP14P50281 582 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 KDSRQ06136 332 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 MKRN4PQ13434 485 aaPredicted RBP13.58□□□□□ -0.24
GPC4-201ENST00000370828 CYTH1Q15438 398 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 KIAA1755Q5JYT7 1200 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 SLFN12Q8IYM2 578 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 CDKL2Q92772 493 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 GOLPH3Q9H4A6 298 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 TMOD4Q9NZQ9 345 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 IGSF1Q8N6C5 1336 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 PLA2R1Q13018 1463 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 CCDC195A0A1B0GUA6 201 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 KRT7P08729 469 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 ZCCHC18P0CG32 403 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 KRT10P13645 584 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 IL1RL1Q01638 556 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 GRIN1Q05586 938 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 NR1H3Q13133 447 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 RSBN1LQ6PCB5 846 aaPredicted RBP13.58□□□□□ -0.24
GPC4-201ENST00000370828 TRPC5Q9UL62 973 aaPredicted RBP13.58□□□□□ -0.24
GPC4-201ENST00000370828 FIS1Q9Y3D6 152 aa13.58□□□□□ -0.24
GPC4-201ENST00000370828 MYCLP12524 364 aaPredicted RBP13.57□□□□□ -0.24
GPC4-201ENST00000370828 BTKQ06187 659 aa13.57□□□□□ -0.24
GPC4-201ENST00000370828 FAM102BQ5T8I3 360 aa13.57□□□□□ -0.24
GPC4-201ENST00000370828 PDIK1LQ8N165 341 aa13.57□□□□□ -0.24
GPC4-201ENST00000370828 SDCCAG3Q96C92 435 aa13.57□□□□□ -0.24
GPC4-201ENST00000370828 STRBPQ96SI9 672 aaKnown RBP13.57□□□□□ -0.24
GPC4-201ENST00000370828 NPHS2Q9NP85 383 aa13.57□□□□□ -0.24
GPC4-201ENST00000370828 DDX20Q9UHI6 824 aaKnown RBP13.57□□□□□ -0.24
GPC4-201ENST00000370828 RFC4P35249 363 aa13.57□□□□□ -0.24
GPC4-201ENST00000370828 DPYDQ12882 1025 aa13.57□□□□□ -0.24
GPC4-201ENST00000370828 ZYXQ15942 572 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms