RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 NACC1Q96RE7 527 aa16.55■□□□□ 0.24
COL9A1-204ENST00000370496 MTIF3Q9H2K0 278 aaKnown RBP16.55■□□□□ 0.24
COL9A1-204ENST00000370496 PRO3102Q9H379 93 aa16.55■□□□□ 0.24
COL9A1-204ENST00000370496 NBNO60934 754 aa16.54■□□□□ 0.24
COL9A1-204ENST00000370496 MAFO75444 373 aaPredicted RBP16.54■□□□□ 0.24
COL9A1-204ENST00000370496 VTNP04004 478 aa16.54■□□□□ 0.24
COL9A1-204ENST00000370496 ACTN1P12814 892 aa16.54■□□□□ 0.24
COL9A1-204ENST00000370496 RARRES1P49788 294 aa16.54■□□□□ 0.24
COL9A1-204ENST00000370496 MGAT3Q09327 533 aa16.54■□□□□ 0.24
COL9A1-204ENST00000370496 MBTPS1Q14703 1052 aa16.54■□□□□ 0.24
COL9A1-204ENST00000370496 SLC39A14Q15043 492 aa16.54■□□□□ 0.24
COL9A1-204ENST00000370496 FAM26DQ5JW98 314 aa16.54■□□□□ 0.24
COL9A1-204ENST00000370496 CABP7Q86V35 215 aa16.54■□□□□ 0.24
COL9A1-204ENST00000370496 KIAA0319LQ8IZA0 1049 aa16.54■□□□□ 0.24
COL9A1-204ENST00000370496 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL9A1-204ENST00000370496 ATP6V0A4Q9HBG4 840 aa16.54■□□□□ 0.24
COL9A1-204ENST00000370496 DDX19AQ9NUU7 478 aaKnown RBP16.54■□□□□ 0.24
COL9A1-204ENST00000370496 FBXO2Q9UK22 296 aaPredicted RBP16.54■□□□□ 0.24
COL9A1-204ENST00000370496 KIAA1024Q9UPX6 916 aa16.54■□□□□ 0.24
COL9A1-204ENST00000370496 ATP6V1DQ9Y5K8 247 aa16.54■□□□□ 0.24
COL9A1-204ENST00000370496 A0A087WWV3 80 aa16.53■□□□□ 0.24
COL9A1-204ENST00000370496 A0A1W2PPC1 479 aa16.53■□□□□ 0.24
COL9A1-204ENST00000370496 ARHGEF35A5YM69 484 aa16.53■□□□□ 0.24
COL9A1-204ENST00000370496 GAS2O43903 313 aaKnown RBP16.53■□□□□ 0.24
COL9A1-204ENST00000370496 USO1O60763 962 aaKnown RBP16.53■□□□□ 0.24
COL9A1-204ENST00000370496 YEATS4O95619 227 aa16.53■□□□□ 0.24
COL9A1-204ENST00000370496 CHRNA1P02708 482 aa16.53■□□□□ 0.24
COL9A1-204ENST00000370496 GHRP10912 638 aa16.53■□□□□ 0.24
COL9A1-204ENST00000370496 NCLP19338 710 aaKnown RBP16.53■□□□□ 0.24
COL9A1-204ENST00000370496 UBA7P41226 1012 aa16.53■□□□□ 0.24
COL9A1-204ENST00000370496 DNM1Q05193 864 aaKnown RBP16.53■□□□□ 0.24
COL9A1-204ENST00000370496 GRIN1Q05586 938 aa16.53■□□□□ 0.24
COL9A1-204ENST00000370496 C9orf50Q5SZB4 431 aa16.53■□□□□ 0.24
COL9A1-204ENST00000370496 ATL3Q6DD88 541 aa16.53■□□□□ 0.24
COL9A1-204ENST00000370496 ZNF365Q70YC5 407 aa16.53■□□□□ 0.24
COL9A1-204ENST00000370496 LINC01465Q8N7H1 131 aa16.53■□□□□ 0.24
COL9A1-204ENST00000370496 KRI1Q8N9T8 703 aaKnown RBP16.53■□□□□ 0.24
COL9A1-204ENST00000370496 ZNF579Q8NAF0 562 aaKnown RBP16.53■□□□□ 0.24
COL9A1-204ENST00000370496 CALML4Q96GE6 196 aa16.53■□□□□ 0.24
COL9A1-204ENST00000370496 CEP89Q96ST8 783 aa16.53■□□□□ 0.24
COL9A1-204ENST00000370496 MTRQ99707 1265 aa16.53■□□□□ 0.24
COL9A1-204ENST00000370496 NT5C3AQ9H0P0 336 aa16.53■□□□□ 0.24
COL9A1-204ENST00000370496 DHX33Q9H6R0 707 aaKnown RBP16.53■□□□□ 0.24
COL9A1-204ENST00000370496 TFIP11Q9UBB9 837 aaKnown RBP16.53■□□□□ 0.24
COL9A1-204ENST00000370496 DBR1Q9UK59 544 aaKnown RBP16.53■□□□□ 0.24
COL9A1-204ENST00000370496 RANBP2P49792 3224 aaKnown RBP16.53■□□□□ 0.24
COL9A1-204ENST00000370496 ZBBXA8MT70 800 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 SPTLC2O15270 562 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 DGAT1O75907 488 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 FGBP02675 491 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 CXCL10P02778 98 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 XRCC6P12956 609 aaKnown RBP eCLIP16.52■□□□□ 0.24
COL9A1-204ENST00000370496 TXLNAP40222 546 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 NUCB2P80303 420 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 SHHQ15465 462 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 KIZQ2M2Z5 673 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 TMEM240Q5SV17 173 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 CNKSR3Q6P9H4 555 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 OTOP2Q7RTS6 562 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 LINC00301Q8NCQ3 95 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 TET1Q8NFU7 2136 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 TCP11Q8WWU5 503 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 MMTAG2Q9BU76 263 aaKnown RBP16.52■□□□□ 0.24
COL9A1-204ENST00000370496 CELF4Q9BZC1 486 aaKnown RBP16.52■□□□□ 0.24
COL9A1-204ENST00000370496 CSRNP2Q9H175 543 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 CFAP45Q9UL16 551 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 ZDHHC9Q9Y397 364 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 SRPRBQ9Y5M8 271 aaKnown RBP16.52■□□□□ 0.24
COL9A1-204ENST00000370496 MORC2Q9Y6X9 1032 aaPredicted RBP16.52■□□□□ 0.24
COL9A1-204ENST00000370496 MICAL3Q7RTP6 2002 aa16.52■□□□□ 0.24
COL9A1-204ENST00000370496 IGKV6-21A0A0C4DH24 114 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 KRT85P78386 507 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 DRP2Q13474 957 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 LPIN1Q14693 890 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 ECM1Q16610 540 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 FBXO47Q5MNV8 452 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 TSHZ1Q6ZSZ6 1077 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 C16orf59Q7L2K0 433 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 RHPN2Q8IUC4 686 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 KCNG4Q8TDN1 519 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 NLRP7Q8WX94 980 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 PSPC1Q8WXF1 523 aaKnown RBP16.51■□□□□ 0.23
COL9A1-204ENST00000370496 SEPT8Q92599 483 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 TMEM143Q96AN5 459 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 CLIC6Q96NY7 704 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 PLIN2Q99541 437 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 OSMRQ99650 979 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 IFIH1Q9BYX4 1025 aaKnown RBP16.51■□□□□ 0.23
COL9A1-204ENST00000370496 BHMT2Q9H2M3 363 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 SUCLA2Q9P2R7 463 aaPredicted RBP16.51■□□□□ 0.23
COL9A1-204ENST00000370496 DNM3Q9UQ16 869 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 SLC26A4O43511 780 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 PPP6R2O75170 966 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 BAIAP3O94812 1187 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 GPC3P51654 580 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 NLRP11P59045 1033 aaKnown RBP16.51■□□□□ 0.23
COL9A1-204ENST00000370496 PAK2Q13177 524 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 PLEKHG4Q58EX7 1191 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 SPECC1Q5M775 1068 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 ZNF710Q8N1W2 664 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms