RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 EXOC3L4Q17RC7 722 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 ASTE1Q2TB18 679 aaPredicted RBP15.37■□□□□ 0.05
USF1-202ENST00000368020 FAM178BQ8IXR5 827 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 ZNF784Q8NCA9 323 aaPredicted RBP15.37■□□□□ 0.05
USF1-202ENST00000368020 PIGOQ8TEQ8 1089 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 SLC10A4Q96EP9 437 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 CLMNQ96JQ2 1002 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 ARID3AQ99856 593 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 PARD6BQ9BYG5 372 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 ELP3Q9H9T3 547 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 JADE2Q9NQC1 790 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 KCNH7Q9NS40 1196 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 KCNH4Q9UQ05 1017 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 UBIAD1Q9Y5Z9 338 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 ABL1P00519 1130 aa15.36■□□□□ 0.05
USF1-202ENST00000368020 ARP10275 920 aa15.36■□□□□ 0.05
USF1-202ENST00000368020 HOXD13P35453 343 aa15.36■□□□□ 0.05
USF1-202ENST00000368020 MAGEA1P43355 309 aa15.36■□□□□ 0.05
USF1-202ENST00000368020 OAZ1P54368 228 aa15.36■□□□□ 0.05
USF1-202ENST00000368020 CBX1P83916 185 aa15.36■□□□□ 0.05
USF1-202ENST00000368020 FSTL1Q12841 308 aa15.36■□□□□ 0.05
USF1-202ENST00000368020 HGSNATQ68CP4 663 aa15.36■□□□□ 0.05
USF1-202ENST00000368020 GBP6Q6ZN66 633 aa15.36■□□□□ 0.05
USF1-202ENST00000368020 TMEM174Q8WUU8 243 aa15.36■□□□□ 0.05
USF1-202ENST00000368020 LACRTQ9GZZ8 138 aa15.36■□□□□ 0.05
USF1-202ENST00000368020 GANQ9H2C0 597 aa15.36■□□□□ 0.05
USF1-202ENST00000368020 LARSQ9P2J5 1176 aaKnown RBP15.36■□□□□ 0.05
USF1-202ENST00000368020 TRIM10Q9UDY6 481 aa15.36■□□□□ 0.05
USF1-202ENST00000368020 PUF60Q9UHX1 559 aaKnown RBP15.36■□□□□ 0.05
USF1-202ENST00000368020 RAB21Q9UL25 225 aa15.36■□□□□ 0.05
USF1-202ENST00000368020 PTPRFP10586 1907 aa15.36■□□□□ 0.05
USF1-202ENST00000368020 RSPH10B2B2RC85 870 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 RSPH10BP0C881 870 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 ALAS1P13196 640 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 VCAM1P19320 739 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 SFNP31947 248 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 JAK3P52333 1124 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 SNRPFP62306 86 aaKnown RBP15.35■□□□□ 0.05
USF1-202ENST00000368020 CYP27A1Q02318 531 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 ITIH3Q06033 890 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 GABPB1Q06547 395 aaPredicted RBP15.35■□□□□ 0.05
USF1-202ENST00000368020 MTMR1Q13613 665 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 PPP2R5AQ15172 486 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 ASIC2Q16515 512 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 TKFCQ3LXA3 575 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 CCDC70Q6NSX1 233 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 CC2D1AQ6P1N0 951 aaPredicted RBP15.35■□□□□ 0.05
USF1-202ENST00000368020 SAMD1Q6SPF0 538 aaPredicted RBP15.35■□□□□ 0.05
USF1-202ENST00000368020 ZNF720Q7Z2F6 126 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 RDM1Q8NG50 284 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 NOX5Q96PH1 765 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 ZNF446Q9NWS9 450 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 FRMD4BQ9Y2L6 1034 aa15.35■□□□□ 0.05
USF1-202ENST00000368020 MACROD2A1Z1Q3 448 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 SPDYE4A6NLX3 237 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 NFIBO00712 420 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 IRF6O14896 467 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 ZNF263O14978 683 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 MAFGO15525 162 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 PLEKP08567 350 aaPredicted RBP15.34■□□□□ 0.05
USF1-202ENST00000368020 PNMA6AP0CW24 399 aaPredicted RBP15.34■□□□□ 0.05
USF1-202ENST00000368020 TCP1P17987 556 aaKnown RBP15.34■□□□□ 0.05
USF1-202ENST00000368020 ITGB5P18084 799 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 UBXN2AP68543 259 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 KLHL30Q0D2K2 578 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 SLC18A3Q16572 532 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 ODR4Q5SWX8 454 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 VPS36Q86VN1 386 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 SLC9A9Q8IVB4 645 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 MSL3Q8N5Y2 521 aaKnown RBP15.34■□□□□ 0.05
USF1-202ENST00000368020 SYTL5Q8TDW5 730 aaPredicted RBP15.34■□□□□ 0.05
USF1-202ENST00000368020 RUBCNQ92622 972 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 SPAG5Q96R06 1193 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 IWS1Q96ST2 819 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 TMEM206Q9H813 350 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 AGO4Q9HCK5 861 aaKnown RBP15.34■□□□□ 0.05
USF1-202ENST00000368020 NLRC4Q9NPP4 1024 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 TARSL2A2RTX5 802 aaKnown RBP15.34■□□□□ 0.05
USF1-202ENST00000368020 AKAP3O75969 853 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 ATP1A1P05023 1023 aaKnown RBP15.34■□□□□ 0.05
USF1-202ENST00000368020 ZSCAN20P17040 1043 aaPredicted RBP15.34■□□□□ 0.05
USF1-202ENST00000368020 RFX1P22670 979 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 QARSP47897 775 aaKnown RBP15.34■□□□□ 0.05
USF1-202ENST00000368020 RAPGEF1Q13905 1077 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 FAM186BQ8IYM0 893 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 PROCA1Q8NCQ7 364 aaPredicted RBP15.34■□□□□ 0.05
USF1-202ENST00000368020 OPTNQ96CV9 577 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 OTUD5Q96G74 571 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 CCDC43Q96MW1 224 aaKnown RBP15.34■□□□□ 0.05
USF1-202ENST00000368020 TMOD4Q9NZQ9 345 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 FHOD1Q9Y613 1164 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 MYH10P35580 1976 aa15.34■□□□□ 0.05
USF1-202ENST00000368020 ZMYM2Q9UBW7 1377 aa15.33■□□□□ 0.04
USF1-202ENST00000368020 A0A0G2JLL6 359 aaPredicted RBP15.33■□□□□ 0.04
USF1-202ENST00000368020 RCCD1A6NED2 376 aa15.33■□□□□ 0.04
USF1-202ENST00000368020 BTNL10A8MVZ5 291 aa15.33■□□□□ 0.04
USF1-202ENST00000368020 DKC1O60832 514 aaKnown RBP eCLIP15.33■□□□□ 0.04
USF1-202ENST00000368020 GFPT2O94808 682 aa15.33■□□□□ 0.04
USF1-202ENST00000368020 CCDC172P0C7W6 258 aa15.33■□□□□ 0.04
USF1-202ENST00000368020 UCHL3P15374 230 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms