RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 PCDHA13Q9Y5I0 950 aa23.33■■□□□ 1.32
PTPN18-202ENST00000347849 FKBP15Q5T1M5 1219 aa23.32■■□□□ 1.32
PTPN18-202ENST00000347849 CAPS2Q9BXY5 557 aa23.32■■□□□ 1.32
PTPN18-202ENST00000347849 COL4A3BPQ9Y5P4 624 aa23.32■■□□□ 1.32
PTPN18-202ENST00000347849 SSC5DA1L4H1 1573 aa23.32■■□□□ 1.32
PTPN18-202ENST00000347849 ITGB3BPQ13352 177 aaPredicted RBP23.32■■□□□ 1.32
PTPN18-202ENST00000347849 TTC19Q6DKK2 380 aaPredicted RBP23.32■■□□□ 1.32
PTPN18-202ENST00000347849 MICALL1Q8N3F8 863 aa23.32■■□□□ 1.32
PTPN18-202ENST00000347849 TUFT1Q9NNX1 390 aa23.32■■□□□ 1.32
PTPN18-202ENST00000347849 DHX15O43143 795 aaKnown RBP23.31■■□□□ 1.32
PTPN18-202ENST00000347849 CDK17Q00537 523 aa23.31■■□□□ 1.32
PTPN18-202ENST00000347849 PPFIA1Q13136 1202 aa23.31■■□□□ 1.32
PTPN18-202ENST00000347849 NFRKBQ6P4R8 1299 aa23.31■■□□□ 1.32
PTPN18-202ENST00000347849 EPM2AIP1Q7L775 607 aaPredicted RBP23.31■■□□□ 1.32
PTPN18-202ENST00000347849 ARHGAP20Q9P2F6 1191 aa23.31■■□□□ 1.32
PTPN18-202ENST00000347849 RBBP6Q7Z6E9 1792 aaKnown RBP23.31■■□□□ 1.32
PTPN18-202ENST00000347849 A0A087WUV0 522 aaPredicted RBP23.31■■□□□ 1.32
PTPN18-202ENST00000347849 GTF2A1P52655 376 aaPredicted RBP23.31■■□□□ 1.32
PTPN18-202ENST00000347849 C1orf186Q6ZWK4 172 aa23.31■■□□□ 1.32
PTPN18-202ENST00000347849 TADA2BQ86TJ2 420 aa23.31■■□□□ 1.32
PTPN18-202ENST00000347849 BCAS4Q8TDM0 211 aa23.31■■□□□ 1.32
PTPN18-202ENST00000347849 UPF1Q92900 1129 aaKnown RBP eCLIP23.31■■□□□ 1.323e-7■■■□□ 14.6
PTPN18-202ENST00000347849 KLRG1Q96E93 195 aa23.31■■□□□ 1.32
PTPN18-202ENST00000347849 TEKT3Q9BXF9 490 aa23.31■■□□□ 1.32
PTPN18-202ENST00000347849 PICK1Q9NRD5 415 aa23.31■■□□□ 1.32
PTPN18-202ENST00000347849 GINM1Q9NU53 330 aa23.31■■□□□ 1.32
PTPN18-202ENST00000347849 EHD2Q9NZN4 543 aa23.31■■□□□ 1.32
PTPN18-202ENST00000347849 FGFR1OPO95684 399 aaKnown RBP23.3■■□□□ 1.32
PTPN18-202ENST00000347849 SETQ01105 290 aaPredicted RBP23.3■■□□□ 1.32
PTPN18-202ENST00000347849 APBA1Q02410 837 aa23.3■■□□□ 1.32
PTPN18-202ENST00000347849 KCNMA1Q12791 1236 aa23.3■■□□□ 1.32
PTPN18-202ENST00000347849 TKFCQ3LXA3 575 aa23.3■■□□□ 1.32
PTPN18-202ENST00000347849 NSMFQ6X4W1 530 aa23.3■■□□□ 1.32
PTPN18-202ENST00000347849 APOBEC3FQ8IUX4 373 aaKnown RBP23.3■■□□□ 1.32
PTPN18-202ENST00000347849 OSBPL9Q96SU4 736 aa23.3■■□□□ 1.32
PTPN18-202ENST00000347849 DEF6Q9H4E7 631 aa23.3■■□□□ 1.32
PTPN18-202ENST00000347849 MMRN2Q9H8L6 949 aa23.3■■□□□ 1.32
PTPN18-202ENST00000347849 PLAGL2Q9UPG8 496 aa23.3■■□□□ 1.32
PTPN18-202ENST00000347849 STK24Q9Y6E0 443 aa23.3■■□□□ 1.32
PTPN18-202ENST00000347849 A0A1W2PQJ5 194 aa23.3■■□□□ 1.32
PTPN18-202ENST00000347849 EBAG9O00559 213 aa23.3■■□□□ 1.32
PTPN18-202ENST00000347849 GHRHRQ02643 423 aa23.3■■□□□ 1.32
PTPN18-202ENST00000347849 CCDC40Q4G0X9 1142 aa23.3■■□□□ 1.32
PTPN18-202ENST00000347849 FOXR2Q6PJQ5 311 aa23.3■■□□□ 1.32
PTPN18-202ENST00000347849 MCF2L2Q86YR7 1114 aa23.3■■□□□ 1.32
PTPN18-202ENST00000347849 LXNQ9BS40 222 aa23.3■■□□□ 1.32
PTPN18-202ENST00000347849 DDNO94850 711 aaPredicted RBP23.29■■□□□ 1.32
PTPN18-202ENST00000347849 EIF4A3P38919 411 aaKnown RBP23.29■■□□□ 1.32
PTPN18-202ENST00000347849 GNGT1P63211 74 aa23.29■■□□□ 1.32
PTPN18-202ENST00000347849 ADAM9Q13443 819 aa23.29■■□□□ 1.32
PTPN18-202ENST00000347849 FIGNQ5HY92 759 aa23.29■■□□□ 1.32
PTPN18-202ENST00000347849 CCDC181Q5TID7 509 aa23.29■■□□□ 1.32
PTPN18-202ENST00000347849 KSR1Q8IVT5 923 aa23.29■■□□□ 1.32
PTPN18-202ENST00000347849 UBIAD1Q9Y5Z9 338 aa23.29■■□□□ 1.32
PTPN18-202ENST00000347849 MYCLP12524 364 aaPredicted RBP23.28■■□□□ 1.32
PTPN18-202ENST00000347849 NMT1P30419 496 aaKnown RBP23.28■■□□□ 1.32
PTPN18-202ENST00000347849 KIF11P52732 1056 aa23.28■■□□□ 1.32
PTPN18-202ENST00000347849 EPHA7Q15375 998 aa23.28■■□□□ 1.32
PTPN18-202ENST00000347849 GPC2Q8N158 579 aa23.28■■□□□ 1.32
PTPN18-202ENST00000347849 ANKRD13CQ8N6S4 541 aa23.28■■□□□ 1.32
PTPN18-202ENST00000347849 AKR1B10O60218 316 aa23.28■■□□□ 1.32
PTPN18-202ENST00000347849 ATP9AO75110 1047 aa23.28■■□□□ 1.32
PTPN18-202ENST00000347849 ZBED4O75132 1171 aa23.28■■□□□ 1.32
PTPN18-202ENST00000347849 PGM5Q15124 567 aa23.28■■□□□ 1.32
PTPN18-202ENST00000347849 ZC2HC1CQ53FD0 456 aaPredicted RBP23.28■■□□□ 1.32
PTPN18-202ENST00000347849 TSEN2Q8NCE0 465 aaKnown RBP23.28■■□□□ 1.32
PTPN18-202ENST00000347849 SH2D3AQ9BRG2 576 aa23.28■■□□□ 1.32
PTPN18-202ENST00000347849 AGO4Q9HCK5 861 aaKnown RBP23.28■■□□□ 1.32
PTPN18-202ENST00000347849 DOCK1Q14185 1865 aa23.28■■□□□ 1.32
PTPN18-202ENST00000347849 GOLGA8KD6RF30 607 aa23.27■■□□□ 1.32
PTPN18-202ENST00000347849 NCK2O43639 380 aa23.27■■□□□ 1.32
PTPN18-202ENST00000347849 GCNT3O95395 438 aa23.27■■□□□ 1.32
PTPN18-202ENST00000347849 PRLRP16471 622 aa23.27■■□□□ 1.32
PTPN18-202ENST00000347849 NR2F2P24468 414 aa23.27■■□□□ 1.32
PTPN18-202ENST00000347849 KNOP1Q1ED39 458 aaKnown RBP23.27■■□□□ 1.32
PTPN18-202ENST00000347849 PCNX4Q63HM2 1172 aa23.27■■□□□ 1.32
PTPN18-202ENST00000347849 REPS2Q8NFH8 660 aa23.27■■□□□ 1.32
PTPN18-202ENST00000347849 RIT2Q99578 217 aa23.27■■□□□ 1.32
PTPN18-202ENST00000347849 CTDP1Q9Y5B0 961 aaPredicted RBP23.27■■□□□ 1.32
PTPN18-202ENST00000347849 FAM169AQ9Y6X4 670 aa23.27■■□□□ 1.32
PTPN18-202ENST00000347849 MYH10P35580 1976 aa23.27■■□□□ 1.32
PTPN18-202ENST00000347849 OPA1O60313 960 aa23.27■■□□□ 1.32
PTPN18-202ENST00000347849 TBCAO75347 108 aaKnown RBP23.27■■□□□ 1.32
PTPN18-202ENST00000347849 LMNB1P20700 586 aa23.27■■□□□ 1.32
PTPN18-202ENST00000347849 HOXA7P31268 230 aaPredicted RBP23.27■■□□□ 1.32
PTPN18-202ENST00000347849 BAATQ14032 418 aaPredicted RBP23.27■■□□□ 1.32
PTPN18-202ENST00000347849 RNF207Q6ZRF8 634 aa23.27■■□□□ 1.32
PTPN18-202ENST00000347849 TRIM59Q8IWR1 403 aa23.27■■□□□ 1.32
PTPN18-202ENST00000347849 ZC3H3Q8IXZ2 948 aaKnown RBP23.27■■□□□ 1.32
PTPN18-202ENST00000347849 ARL8AQ96BM9 186 aa23.27■■□□□ 1.32
PTPN18-202ENST00000347849 RMDN3Q96TC7 470 aa23.27■■□□□ 1.32
PTPN18-202ENST00000347849 PEX10O60683 326 aa23.26■■□□□ 1.31
PTPN18-202ENST00000347849 LIG3P49916 1009 aa23.26■■□□□ 1.31
PTPN18-202ENST00000347849 ITIH3Q06033 890 aa23.26■■□□□ 1.31
PTPN18-202ENST00000347849 CEP63Q96MT8 703 aa23.26■■□□□ 1.31
PTPN18-202ENST00000347849 SH3GL2Q99962 352 aa23.26■■□□□ 1.31
PTPN18-202ENST00000347849 FAM107BQ9H098 131 aa23.26■■□□□ 1.31
PTPN18-202ENST00000347849 RNF146Q9NTX7 359 aa23.26■■□□□ 1.31
PTPN18-202ENST00000347849 EIF3HO15372 352 aaKnown RBP eCLIP23.26■■□□□ 1.31
PTPN18-202ENST00000347849 BCRP11274 1271 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms