RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 COL20A1Q9P218 1284 aa16.27■□□□□ 0.2
VIPAS39-202ENST00000343765 STIM2Q9P246 746 aa16.27■□□□□ 0.2
VIPAS39-202ENST00000343765 PCDHGC5Q9Y5F6 944 aa16.27■□□□□ 0.2
VIPAS39-202ENST00000343765 FRMPD4Q14CM0 1322 aa16.27■□□□□ 0.19
VIPAS39-202ENST00000343765 ESYT3A0FGR9 886 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 ZSCAN5CA6NGD5 496 aaPredicted RBP16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 EIF3DO15371 548 aaKnown RBP eCLIP16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 PPP1R12BO60237 982 aaPredicted RBP16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 ITGB5P18084 799 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 RXRBP28702 533 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 ITIH3Q06033 890 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 MEI1Q5TIA1 1274 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 HS2ST1Q7LGA3 356 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 ZNF720Q7Z2F6 126 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 FAM160B2Q86V87 743 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 SYCP3Q8IZU3 236 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 FIZ1Q96SL8 496 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 WDR11Q9BZH6 1224 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 FEM1BQ9UK73 627 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 ZC3H4Q9UPT8 1303 aaKnown RBP16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 HIP1RO75146 1068 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 CAPN2P17655 700 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 TBC1D10BQ4KMP7 808 aaPredicted RBP16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 RTKN2Q8IZC4 609 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 AGPAT3Q9NRZ7 376 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 SAMM50Q9Y512 469 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 TMCO5BA8MYB1 307 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 KCNK3O14649 394 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 KCTD19Q17RG1 926 aaPredicted RBP16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 CBWD6Q4V339 395 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 CBWD3Q5JTY5 395 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 CBWD5Q5RIA9 395 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 U2AF1L4Q8WU68 220 aaKnown RBP16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 BORCS6Q96GS4 357 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 KRT12Q99456 494 aa16.26■□□□□ 0.19
VIPAS39-202ENST00000343765 DPEP1P16444 411 aa16.25■□□□□ 0.19
VIPAS39-202ENST00000343765 AARSP49588 968 aaKnown RBP eCLIP16.25■□□□□ 0.19
VIPAS39-202ENST00000343765 SETQ01105 290 aaPredicted RBP16.25■□□□□ 0.19
VIPAS39-202ENST00000343765 MXRA8Q9BRK3 442 aa16.25■□□□□ 0.19
VIPAS39-202ENST00000343765 FRMD4BQ9Y2L6 1034 aa16.25■□□□□ 0.19
VIPAS39-202ENST00000343765 BZW2Q9Y6E2 419 aaKnown RBP16.25■□□□□ 0.19
VIPAS39-202ENST00000343765 GOLGA6BA6NDN3 693 aa16.25■□□□□ 0.19
VIPAS39-202ENST00000343765 TISP43B9A030 160 aa16.25■□□□□ 0.19
VIPAS39-202ENST00000343765 FLOT1O75955 427 aa16.25■□□□□ 0.19
VIPAS39-202ENST00000343765 ALAS1P13196 640 aa16.25■□□□□ 0.19
VIPAS39-202ENST00000343765 JAM2P57087 298 aa16.25■□□□□ 0.19
VIPAS39-202ENST00000343765 MIER3Q7Z3K6 550 aa16.25■□□□□ 0.19
VIPAS39-202ENST00000343765 IFT81Q8WYA0 676 aa16.25■□□□□ 0.19
VIPAS39-202ENST00000343765 TAF4BQ92750 862 aa16.25■□□□□ 0.19
VIPAS39-202ENST00000343765 KCNH7Q9NS40 1196 aa16.25■□□□□ 0.19
VIPAS39-202ENST00000343765 K7ENM7 598 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 GLI1P08151 1106 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 FMO5P49326 533 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 RPS6KA1Q15418 735 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 KLHL7Q8IXQ5 586 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 NIM1KQ8IY84 436 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 PCIF1Q9H4Z3 704 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 TMEM150BA6NC51 233 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 AGPSO00116 658 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 DDX3XO00571 662 aaKnown RBP eCLIP16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 WNT10BO00744 389 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 EVI5O60447 810 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 EXOC3O60645 756 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 HEXIM1O94992 359 aaKnown RBP16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 ASNSP08243 561 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 GUCY2DQ02846 1103 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 ZSCAN26Q16670 478 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 PADI6Q6TGC4 694 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 DEFB132Q7Z7B7 95 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 DAW1Q8N136 415 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 GOLGA6L1Q8N7Z2 621 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 PSMD1Q99460 953 aa16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 RAVER2Q9HCJ3 691 aaKnown RBP16.24■□□□□ 0.19
VIPAS39-202ENST00000343765 ZNF536O15090 1300 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 ZNF131P52739 623 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 ARHGAP44Q17R89 818 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 STXBP4Q6ZWJ1 553 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 VPS36Q86VN1 386 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 INPP4AQ96PE3 977 aaPredicted RBP16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 TRERF1Q96PN7 1200 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 EPB41L5Q9HCM4 733 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 SEPT11Q9NVA2 429 aaKnown RBP16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 PSD3Q9NYI0 1048 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 CALCOCO1Q9P1Z2 691 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 SEL1LQ9UBV2 794 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 DNAJC12Q9UKB3 198 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 ATAD5Q96QE3 1844 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 ICAM1P05362 532 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 PRKCIP41743 596 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 STAT1P42224 750 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 CARSP49589 748 aaKnown RBP16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 DRAP1Q14919 205 aaPredicted RBP16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 GLYCTKQ8IVS8 523 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 TSEN2Q8NCE0 465 aaKnown RBP16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 AFAP1L1Q8TED9 768 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 ODF2LQ9ULJ1 636 aa16.23■□□□□ 0.19
VIPAS39-202ENST00000343765 F8VZ95 297 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 LRRN2O75325 713 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 EIF2AK2P19525 551 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms