RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 KIAA0355O15063 1070 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 PQBP1O60828 265 aaKnown RBP11.64□□□□□ -0.55
TPM3-207ENST00000341372 RNF40O75150 1001 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 PPFIA4O75335 1185 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 CIITAP33076 1130 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 PSMC6P62333 389 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 FAAP100Q0VG06 881 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 NFRKBQ6P4R8 1299 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 SESTD1Q86VW0 696 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 ARMC2Q8NEN0 867 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 RASGRP4Q8TDF6 673 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 WASF1Q92558 559 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 SPATA33Q96N06 139 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 IPO9Q96P70 1041 aaKnown RBP11.64□□□□□ -0.55
TPM3-207ENST00000341372 GDF15Q99988 308 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 LLPHQ9BRT6 129 aaKnown RBP11.64□□□□□ -0.55
TPM3-207ENST00000341372 STIM2Q9P246 746 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 IGLV3-22A0A075B6J6 115 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 DCDC2CA8MYV0 355 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 MEIS1O00470 390 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 EDIL3O43854 480 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 ATP9AO75110 1047 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 SYN1P17600 705 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 PTPN11Q06124 597 aaPredicted RBP11.64□□□□□ -0.55
TPM3-207ENST00000341372 ALKBH2Q6NS38 261 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 BLIDQ8IZY5 108 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 BCAS3Q9H6U6 928 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 MLXIPQ9HAP2 919 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 KCNH7Q9NS40 1196 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 EVA1BQ9NVM1 165 aa11.64□□□□□ -0.55
TPM3-207ENST00000341372 TRIOBPQ9H2D6 2365 aa11.63□□□□□ -0.55
TPM3-207ENST00000341372 NFASCO94856 1347 aa11.63□□□□□ -0.55
TPM3-207ENST00000341372 TRIM43BA6NCK2 446 aa11.63□□□□□ -0.55
TPM3-207ENST00000341372 FAM86B1E9PN63 330 aa11.63□□□□□ -0.55
TPM3-207ENST00000341372 JAK2O60674 1132 aa11.63□□□□□ -0.55
TPM3-207ENST00000341372 FAM86B2P0C5J1 330 aa11.63□□□□□ -0.55
TPM3-207ENST00000341372 XBP1P17861 261 aa11.63□□□□□ -0.55
TPM3-207ENST00000341372 BMP8BP34820 402 aa11.63□□□□□ -0.55
TPM3-207ENST00000341372 COX20Q5RI15 118 aa11.63□□□□□ -0.55
TPM3-207ENST00000341372 CYFIP1Q7L576 1253 aa11.63□□□□□ -0.55
TPM3-207ENST00000341372 SH3RF1Q7Z6J0 888 aa11.63□□□□□ -0.55
TPM3-207ENST00000341372 CYP2W1Q8TAV3 490 aa11.63□□□□□ -0.55
TPM3-207ENST00000341372 TRIM43Q96BQ3 446 aaPredicted RBP11.63□□□□□ -0.55
TPM3-207ENST00000341372 KCNK17Q96T54 332 aa11.63□□□□□ -0.55
TPM3-207ENST00000341372 GPR20Q99678 358 aa11.63□□□□□ -0.55
TPM3-207ENST00000341372 ALG1Q9BT22 464 aa11.63□□□□□ -0.55
TPM3-207ENST00000341372 KATNAL1Q9BW62 490 aa11.63□□□□□ -0.55
TPM3-207ENST00000341372 RANBP2P49792 3224 aaKnown RBP11.62□□□□□ -0.55
TPM3-207ENST00000341372 TLR3O15455 904 aaKnown RBP11.62□□□□□ -0.55
TPM3-207ENST00000341372 ST18O60284 1047 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 B4GALT4O60513 344 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 PDGFRBP09619 1106 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 SETQ01105 290 aaPredicted RBP11.62□□□□□ -0.55
TPM3-207ENST00000341372 NBPF20Q3BBV1 942 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 C16orf70Q9BSU1 422 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 ZBED2Q9BTP6 218 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 AGO4Q9HCK5 861 aaKnown RBP11.62□□□□□ -0.55
TPM3-207ENST00000341372 KCNJ14Q9UNX9 436 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 LGALS2P05162 132 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 CCNYL3P0C7X3 344 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 ARP10275 920 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 ANP32AP39687 249 aaKnown RBP11.62□□□□□ -0.55
TPM3-207ENST00000341372 MAGEA10P43363 369 aaPredicted RBP11.62□□□□□ -0.55
TPM3-207ENST00000341372 USP11P51784 963 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 KMT5BQ4FZB7 885 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 MOXD1Q6UVY6 613 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 CCDC83Q8IWF9 413 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 GJD3Q8N144 294 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 LENG9Q96B70 501 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 PCDHB11Q9Y5F2 797 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 TANC1Q9C0D5 1861 aa11.62□□□□□ -0.55
TPM3-207ENST00000341372 A0A1W2PPC1 479 aa11.61□□□□□ -0.55
TPM3-207ENST00000341372 NOP56O00567 594 aaKnown RBP11.61□□□□□ -0.55
TPM3-207ENST00000341372 CREB3O43889 395 aa11.61□□□□□ -0.55
TPM3-207ENST00000341372 DTNBO60941 627 aa11.61□□□□□ -0.55
TPM3-207ENST00000341372 CD2BP2O95400 341 aaKnown RBP11.61□□□□□ -0.55
TPM3-207ENST00000341372 ZNF286BP0CG31 522 aa11.61□□□□□ -0.55
TPM3-207ENST00000341372 HOXB3P14651 431 aaPredicted RBP11.61□□□□□ -0.55
TPM3-207ENST00000341372 ITGB8P26012 769 aa11.61□□□□□ -0.55
TPM3-207ENST00000341372 HOXC8P31273 242 aa11.61□□□□□ -0.55
TPM3-207ENST00000341372 PSEN2P49810 448 aa11.61□□□□□ -0.55
TPM3-207ENST00000341372 ITGB3BPQ13352 177 aaPredicted RBP11.61□□□□□ -0.55
TPM3-207ENST00000341372 KRT25Q7Z3Z0 450 aa11.61□□□□□ -0.55
TPM3-207ENST00000341372 PLA2G4DQ86XP0 818 aa11.61□□□□□ -0.55
TPM3-207ENST00000341372 TNFRSF25Q93038 417 aa11.61□□□□□ -0.55
TPM3-207ENST00000341372 MBOAT7Q96N66 472 aa11.61□□□□□ -0.55
TPM3-207ENST00000341372 PRDM5Q9NQX1 630 aaPredicted RBP11.61□□□□□ -0.55
TPM3-207ENST00000341372 GJB4Q9NTQ9 266 aa11.61□□□□□ -0.55
TPM3-207ENST00000341372 TMEM39AQ9NV64 488 aa11.61□□□□□ -0.55
TPM3-207ENST00000341372 PRKAB1Q9Y478 270 aa11.61□□□□□ -0.55
TPM3-207ENST00000341372 TELO2Q9Y4R8 837 aa11.61□□□□□ -0.55
TPM3-207ENST00000341372 TMEM229AB2RXF0 380 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 MCM2P49736 904 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 HMGN5P82970 282 aaKnown RBP11.6□□□□□ -0.55
TPM3-207ENST00000341372 TBCKQ8TEA7 893 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 JPH1Q9HDC5 661 aaPredicted RBP11.6□□□□□ -0.55
TPM3-207ENST00000341372 SNTG2Q9NY99 539 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.6□□□□□ -0.55
TPM3-207ENST00000341372 GTF2IRD1Q9UHL9 959 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 POLIQ9UNA4 740 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms