RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 ZNF844Q08AG5 666 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 QRICH1Q2TAL8 776 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 TRIM51Q9BSJ1 452 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 TMBIM4Q9HC24 238 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 CCDC189A1A4V9 331 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 ATP2B4P23634 1241 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 TCP10Q12799 353 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 LRRC57Q8N9N7 239 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 TPCN2Q8NHX9 752 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 CYP2W1Q8TAV3 490 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 CD248Q9HCU0 757 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 SEPT11Q9NVA2 429 aaKnown RBP16.62■□□□□ 0.25
PERM1-201ENST00000341290 GCNT4Q9P109 453 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 SERPINB13Q9UIV8 391 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 TMEM59LQ9UK28 342 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 NOVA2Q9UNW9 492 aaKnown RBP16.62■□□□□ 0.25
PERM1-201ENST00000341290 PGRMC1O00264 195 aaKnown RBP16.62■□□□□ 0.25
PERM1-201ENST00000341290 GCNT3O95395 438 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 SNHG28P0DPA3 235 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 SETQ01105 290 aaPredicted RBP16.62■□□□□ 0.25
PERM1-201ENST00000341290 GIT2Q14161 759 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 MREGQ8N565 214 aa16.62■□□□□ 0.25
PERM1-201ENST00000341290 KDM3AQ9Y4C1 1321 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 SMIM23A6NLE4 172 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 QPCTQ16769 361 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 KNOP1Q1ED39 458 aaKnown RBP16.61■□□□□ 0.25
PERM1-201ENST00000341290 ZFPM1Q8IX07 1006 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 SCFD2Q8WU76 684 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 ANO3Q9BYT9 981 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 BHMT2Q9H2M3 363 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 USP40Q9NVE5 1235 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 CNOT8Q9UFF9 292 aaKnown RBP16.61■□□□□ 0.25
PERM1-201ENST00000341290 HMGB1P1B2RPK0 211 aaPredicted RBP16.61■□□□□ 0.25
PERM1-201ENST00000341290 hCG_1984214I3L0E3 225 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 USP8P40818 1118 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 ZNF211Q13398 564 aaPredicted RBP16.61■□□□□ 0.25
PERM1-201ENST00000341290 SEPT2Q15019 361 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 LRCH2Q5VUJ6 765 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 DPY19L2P1Q6NXN4 242 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 TTLL6Q8N841 843 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 ZNF713Q8N859 430 aaPredicted RBP16.61■□□□□ 0.25
PERM1-201ENST00000341290 PIGOQ8TEQ8 1089 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 PSMD1Q99460 953 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 SLC24A3Q9HC58 644 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 RGL1Q9NZL6 768 aa16.61■□□□□ 0.25
PERM1-201ENST00000341290 HOXA13P31271 388 aaPredicted RBP16.6■□□□□ 0.25
PERM1-201ENST00000341290 DHX9Q08211 1270 aaKnown RBP16.6■□□□□ 0.25
PERM1-201ENST00000341290 NFIAQ12857 509 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 SPRED3Q2MJR0 410 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 GLYCTKQ8IVS8 523 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 MDM1Q8TC05 714 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.6■□□□□ 0.25
PERM1-201ENST00000341290 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.6■□□□□ 0.25
PERM1-201ENST00000341290 CHORDC1Q9UHD1 332 aaPredicted RBP16.6■□□□□ 0.25
PERM1-201ENST00000341290 ATP8A1Q9Y2Q0 1164 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 H0YGN5 161 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 DDX3XO00571 662 aaKnown RBP eCLIP16.6■□□□□ 0.25
PERM1-201ENST00000341290 ZBTB39O15060 712 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 FGGP02679 453 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 CHRNA5P30532 468 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 SHMT1P34896 483 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 GABPAQ06546 454 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 IKQ13123 557 aaPredicted RBP16.6■□□□□ 0.25
PERM1-201ENST00000341290 CD302Q8IX05 232 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 TBC1D16Q8TBP0 767 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 CYFIP2Q96F07 1278 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 RUSC1Q9BVN2 902 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 GOPCQ9HD26 462 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 PLCB1Q9NQ66 1216 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 PIM2Q9P1W9 311 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 NFS1Q9Y697 457 aa16.6■□□□□ 0.25
PERM1-201ENST00000341290 FLOT1O75955 427 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 H2AFZP0C0S5 128 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 IL1R1P14778 569 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 NOVP48745 357 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 MARSP56192 900 aaKnown RBP16.59■□□□□ 0.25
PERM1-201ENST00000341290 MAGOHP61326 146 aaKnown RBP16.59■□□□□ 0.25
PERM1-201ENST00000341290 DOK7Q18PE1 504 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 ZC2HC1CQ53FD0 456 aaPredicted RBP16.59■□□□□ 0.25
PERM1-201ENST00000341290 H2AFVQ71UI9 128 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 MAGOHBQ96A72 148 aaKnown RBP16.59■□□□□ 0.25
PERM1-201ENST00000341290 DNM3Q9UQ16 869 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 PCDHAC2Q9Y5I4 1007 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 NR3C1P04150 777 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 FNTAP49354 379 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 COG2Q14746 738 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 KRT71Q3SY84 523 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 UHMK1Q8TAS1 419 aaKnown RBP16.59■□□□□ 0.25
PERM1-201ENST00000341290 PHF20L1A8MW92 1017 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 CHMP2AO43633 222 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 GALCP54803 685 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 AADACL2Q6P093 401 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 EGFL6Q8IUX8 553 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 RDH13Q8NBN7 331 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 PBKQ96KB5 322 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 KCNMB3Q9NPA1 279 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 PPP1R9AQ9ULJ8 1098 aa16.59■□□□□ 0.25
PERM1-201ENST00000341290 FAM86B1E9PN63 330 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 FAM107AO95990 144 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 FAM86B2P0C5J1 330 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms