RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 PDE12Q6L8Q7 609 aaKnown RBP13.35□□□□□ -0.27
ATXN3-201ENST00000340660 SCFD2Q8WU76 684 aa13.35□□□□□ -0.27
ATXN3-201ENST00000340660 BCO2Q9BYV7 579 aa13.35□□□□□ -0.27
ATXN3-201ENST00000340660 KANSL2Q9H9L4 492 aa13.35□□□□□ -0.27
ATXN3-201ENST00000340660 SWAP70Q9UH65 585 aa13.35□□□□□ -0.27
ATXN3-201ENST00000340660 AKAP2Q9Y2D5 859 aa13.35□□□□□ -0.27
ATXN3-201ENST00000340660 TTC3P53804 2025 aa13.35□□□□□ -0.27
ATXN3-201ENST00000340660 SPINT1O43278 529 aa13.34□□□□□ -0.27
ATXN3-201ENST00000340660 FGF18O76093 207 aa13.34□□□□□ -0.27
ATXN3-201ENST00000340660 CAPNS1P04632 268 aa13.34□□□□□ -0.27
ATXN3-201ENST00000340660 GORABQ5T7V8 394 aa13.34□□□□□ -0.27
ATXN3-201ENST00000340660 OTOP3Q7RTS5 596 aa13.34□□□□□ -0.27
ATXN3-201ENST00000340660 MCM9Q9NXL9 1143 aa13.34□□□□□ -0.27
ATXN3-201ENST00000340660 LAMA1P25391 3075 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 TTLL8A6PVC2 850 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 F5H6K3 240 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 FOXD2O60548 495 aaPredicted RBP13.33□□□□□ -0.28
ATXN3-201ENST00000340660 F2P00734 622 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 ZNF286BP0CG31 522 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 ALAS1P13196 640 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 CASTP20810 708 aaKnown RBP13.33□□□□□ -0.28
ATXN3-201ENST00000340660 GATMP50440 423 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 NOVA1P51513 510 aaKnown RBP13.33□□□□□ -0.28
ATXN3-201ENST00000340660 STARD6P59095 220 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 KLRC3Q07444 240 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 ARHGAP1Q07960 439 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 SF3A2Q15428 464 aaKnown RBP13.33□□□□□ -0.28
ATXN3-201ENST00000340660 STPG1Q5TH74 334 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 DCLRE1AQ6PJP8 1040 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 RUFY4Q6ZNE9 571 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 CERS3Q8IU89 383 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 DHX37Q8IY37 1157 aaKnown RBP13.33□□□□□ -0.28
ATXN3-201ENST00000340660 SLC44A3Q8N4M1 653 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 CELF5Q8N6W0 485 aaKnown RBP13.33□□□□□ -0.28
ATXN3-201ENST00000340660 COPRSQ9NQ92 184 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 PRMT8Q9NR22 394 aaPredicted RBP13.33□□□□□ -0.28
ATXN3-201ENST00000340660 TMPRSS4Q9NRS4 437 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 TMEM260Q9NX78 707 aa13.33□□□□□ -0.28
ATXN3-201ENST00000340660 MTF2Q9Y483 593 aaPredicted RBP13.33□□□□□ -0.28
ATXN3-201ENST00000340660 N4BP1O75113 896 aaKnown RBP13.32□□□□□ -0.28
ATXN3-201ENST00000340660 UQCRFS1P1P0C7P4 283 aa13.32□□□□□ -0.28
ATXN3-201ENST00000340660 NSMFQ6X4W1 530 aa13.32□□□□□ -0.28
ATXN3-201ENST00000340660 LINC01599Q8WXQ3 324 aa13.32□□□□□ -0.28
ATXN3-201ENST00000340660 CCDC17Q96LX7 622 aa13.32□□□□□ -0.28
ATXN3-201ENST00000340660 TCF25Q9BQ70 676 aa13.32□□□□□ -0.28
ATXN3-201ENST00000340660 RIOK1Q9BRS2 568 aaKnown RBP13.32□□□□□ -0.28
ATXN3-201ENST00000340660 MYL10Q9BUA6 226 aa13.32□□□□□ -0.28
ATXN3-201ENST00000340660 KATNAL1Q9BW62 490 aa13.32□□□□□ -0.28
ATXN3-201ENST00000340660 MIA3Q5JRA6 1907 aa13.32□□□□□ -0.28
ATXN3-201ENST00000340660 DOPEY1Q5JWR5 2465 aa13.32□□□□□ -0.28
ATXN3-201ENST00000340660 ASXL3Q9C0F0 2248 aa13.31□□□□□ -0.28
ATXN3-201ENST00000340660 ESPNB1AK53 854 aa13.31□□□□□ -0.28
ATXN3-201ENST00000340660 TDGF1P13385 188 aa13.31□□□□□ -0.28
ATXN3-201ENST00000340660 TROAPQ12815 778 aa13.31□□□□□ -0.28
ATXN3-201ENST00000340660 TKFCQ3LXA3 575 aa13.31□□□□□ -0.28
ATXN3-201ENST00000340660 CCDC149Q6ZUS6 474 aa13.31□□□□□ -0.28
ATXN3-201ENST00000340660 GPR20Q99678 358 aa13.31□□□□□ -0.28
ATXN3-201ENST00000340660 FEM1BQ9UK73 627 aa13.31□□□□□ -0.28
ATXN3-201ENST00000340660 ABCA12Q86UK0 2595 aa13.31□□□□□ -0.28
ATXN3-201ENST00000340660 MYH7BA7E2Y1 1941 aa13.31□□□□□ -0.28
ATXN3-201ENST00000340660 MYH8P13535 1937 aa13.31□□□□□ -0.28
ATXN3-201ENST00000340660 DGKDQ16760 1214 aa13.3□□□□□ -0.28
ATXN3-201ENST00000340660 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.3□□□□□ -0.28
ATXN3-201ENST00000340660 CCDC62Q6P9F0 684 aa13.3□□□□□ -0.28
ATXN3-201ENST00000340660 RASGRP2Q7LDG7 609 aa13.3□□□□□ -0.28
ATXN3-201ENST00000340660 CHST3Q7LGC8 479 aa13.3□□□□□ -0.28
ATXN3-201ENST00000340660 ZNF605Q86T29 641 aa13.3□□□□□ -0.28
ATXN3-201ENST00000340660 LRIG1Q96JA1 1093 aa13.3□□□□□ -0.28
ATXN3-201ENST00000340660 FAM126AQ9BYI3 521 aaPredicted RBP13.3□□□□□ -0.28
ATXN3-201ENST00000340660 ENTPD7Q9NQZ7 604 aa13.3□□□□□ -0.28
ATXN3-201ENST00000340660 ADD3Q9UEY8 706 aaKnown RBP13.3□□□□□ -0.28
ATXN3-201ENST00000340660 PCDHB12Q9Y5F1 795 aa13.3□□□□□ -0.28
ATXN3-201ENST00000340660 FANCIQ9NVI1 1328 aa13.3□□□□□ -0.28
ATXN3-201ENST00000340660 RALGAPA1Q6GYQ0 2036 aa13.3□□□□□ -0.28
ATXN3-201ENST00000340660 LOC102724159A0A0B4J2E5 919 aa13.29□□□□□ -0.28
ATXN3-201ENST00000340660 J3QKU1 62 aa13.29□□□□□ -0.28
ATXN3-201ENST00000340660 CLASP2O75122 1294 aaKnown RBP13.29□□□□□ -0.28
ATXN3-201ENST00000340660 CAND2O75155 1236 aa13.29□□□□□ -0.28
ATXN3-201ENST00000340660 GHRP10912 638 aa13.29□□□□□ -0.28
ATXN3-201ENST00000340660 CDK8P49336 464 aa13.29□□□□□ -0.28
ATXN3-201ENST00000340660 RAB15P59190 212 aa13.29□□□□□ -0.28
ATXN3-201ENST00000340660 BAATQ14032 418 aaPredicted RBP13.29□□□□□ -0.28
ATXN3-201ENST00000340660 PWP2Q15269 919 aaKnown RBP13.29□□□□□ -0.28
ATXN3-201ENST00000340660 ATP6V0A1Q93050 837 aa13.29□□□□□ -0.28
ATXN3-201ENST00000340660 DDX23Q9BUQ8 820 aaKnown RBP13.29□□□□□ -0.28
ATXN3-201ENST00000340660 NEUROG3Q9Y4Z2 214 aa13.29□□□□□ -0.28
ATXN3-201ENST00000340660 COL12A1Q99715 3063 aa13.29□□□□□ -0.28
ATXN3-201ENST00000340660 KANSL1LA0AUZ9 987 aa13.28□□□□□ -0.28
ATXN3-201ENST00000340660 ERVH48-1M5A8F1 160 aa13.28□□□□□ -0.28
ATXN3-201ENST00000340660 TREHO43280 583 aa13.28□□□□□ -0.28
ATXN3-201ENST00000340660 IGSF3O75054 1194 aa13.28□□□□□ -0.28
ATXN3-201ENST00000340660 GH1P01241 217 aa13.28□□□□□ -0.28
ATXN3-201ENST00000340660 EDNRBP24530 442 aa13.28□□□□□ -0.28
ATXN3-201ENST00000340660 HOXC8P31273 242 aa13.28□□□□□ -0.28
ATXN3-201ENST00000340660 ZAP70P43403 619 aa13.28□□□□□ -0.28
ATXN3-201ENST00000340660 PTPN14Q15678 1187 aa13.28□□□□□ -0.28
ATXN3-201ENST00000340660 LY6KQ17RY6 165 aa13.28□□□□□ -0.28
ATXN3-201ENST00000340660 FAM26DQ5JW98 314 aa13.28□□□□□ -0.28
ATXN3-201ENST00000340660 TMC5Q6UXY8 1006 aa13.28□□□□□ -0.28
ATXN3-201ENST00000340660 THNSL1Q8IYQ7 743 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms