RNA–Protein interactions for RNA: ENST00000339859.8

USP54-201, Transcript of ubiquitin specific peptidase 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP54, Length 6,247 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-201ENST00000339859 TUBB4BP68371 445 aa11.03□□□□□ -0.64
USP54-201ENST00000339859 SCYL2Q6P3W7 929 aa11.03□□□□□ -0.64
USP54-201ENST00000339859 XXYLT1Q8NBI6 393 aa11.03□□□□□ -0.64
USP54-201ENST00000339859 CCDC26Q8TAB7 109 aa11.03□□□□□ -0.64
USP54-201ENST00000339859 PIDD1Q9HB75 910 aa11.03□□□□□ -0.64
USP54-201ENST00000339859 KCNH7Q9NS40 1196 aa11.03□□□□□ -0.64
USP54-201ENST00000339859 CD2BP2O95400 341 aaKnown RBP11.03□□□□□ -0.64
USP54-201ENST00000339859 ZBTB48P10074 688 aaPredicted RBP11.03□□□□□ -0.64
USP54-201ENST00000339859 ADORA2AP29274 412 aa11.03□□□□□ -0.64
USP54-201ENST00000339859 WDR18Q9BV38 432 aa11.03□□□□□ -0.64
USP54-201ENST00000339859 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.03□□□□□ -0.64
USP54-201ENST00000339859 CYP2C8P10632 490 aa11.02□□□□□ -0.64
USP54-201ENST00000339859 GOLGA8FQ08AF8 430 aa11.02□□□□□ -0.64
USP54-201ENST00000339859 GOLGA8DPQ0D2H9 430 aa11.02□□□□□ -0.64
USP54-201ENST00000339859 FBXO16Q8IX29 292 aaPredicted RBP11.02□□□□□ -0.64
USP54-201ENST00000339859 PROM2Q8N271 834 aa11.02□□□□□ -0.64
USP54-201ENST00000339859 TXNDC16Q9P2K2 825 aa11.02□□□□□ -0.64
USP54-201ENST00000339859 SLC15A5A6NIM6 579 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 ZNF445P59923 1031 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 MOXD1Q6UVY6 613 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 GPD1LQ8N335 351 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 ZMYND15Q9H091 742 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 A6NJR5 290 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 PKP1Q13835 747 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 RIOX2Q8IUF8 465 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 GRAMD1CQ8IYS0 662 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 RNF139Q8WU17 664 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 ANKEF1Q9NU02 776 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 GCNT4Q9P109 453 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 SYNGAP1Q96PV0 1343 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 DPYSL4O14531 572 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 GPR182O15218 404 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 EFCAB12Q6NXP0 572 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 GJB4Q9NTQ9 266 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 MTRF1LQ9UGC7 380 aaKnown RBP11.02□□□□□ -0.65
USP54-201ENST00000339859 DNAI1Q9UI46 699 aa11.02□□□□□ -0.65
USP54-201ENST00000339859 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.02□□□□□ -0.65
USP54-201ENST00000339859 ZNF699Q32M78 642 aa11.01□□□□□ -0.65
USP54-201ENST00000339859 HAUS1Q96CS2 278 aa11.01□□□□□ -0.65
USP54-201ENST00000339859 SLC38A7Q9NVC3 462 aa11.01□□□□□ -0.65
USP54-201ENST00000339859 RNF8O76064 485 aa11.01□□□□□ -0.65
USP54-201ENST00000339859 ITGA4P13612 1032 aa11.01□□□□□ -0.65
USP54-201ENST00000339859 SLC26A2P50443 739 aa11.01□□□□□ -0.65
USP54-201ENST00000339859 OR8K1Q8NGG5 319 aa11.01□□□□□ -0.65
USP54-201ENST00000339859 FAM213AQ9BRX8 229 aa11.01□□□□□ -0.65
USP54-201ENST00000339859 TYW1Q9NV66 732 aaKnown RBP11.01□□□□□ -0.65
USP54-201ENST00000339859 HOXA2O43364 376 aa11.01□□□□□ -0.65
USP54-201ENST00000339859 ZNF280AP59817 542 aaPredicted RBP11.01□□□□□ -0.65
USP54-201ENST00000339859 CALCOCO2Q13137 446 aa11.01□□□□□ -0.65
USP54-201ENST00000339859 ATP11BQ9Y2G3 1177 aa11.01□□□□□ -0.65
USP54-201ENST00000339859 ACTR2P61160 394 aa11.01□□□□□ -0.65
USP54-201ENST00000339859 SCARA5Q6ZMJ2 495 aa11.01□□□□□ -0.65
USP54-201ENST00000339859 UBE2TQ9NPD8 197 aaPredicted RBP11.01□□□□□ -0.65
USP54-201ENST00000339859 POLIQ9UNA4 740 aa11.01□□□□□ -0.65
USP54-201ENST00000339859 PPME1Q9Y570 386 aa11.01□□□□□ -0.65
USP54-201ENST00000339859 CRYBG1Q9Y4K1 1723 aa11.01□□□□□ -0.65
USP54-201ENST00000339859 THPOP40225 353 aa11□□□□□ -0.65
USP54-201ENST00000339859 RHBDL3P58872 404 aa11□□□□□ -0.65
USP54-201ENST00000339859 KNOP1Q1ED39 458 aaKnown RBP11□□□□□ -0.65
USP54-201ENST00000339859 LONRF3Q496Y0 759 aa11□□□□□ -0.65
USP54-201ENST00000339859 ZFPM1Q8IX07 1006 aa11□□□□□ -0.65
USP54-201ENST00000339859 BBS5Q8N3I7 341 aa11□□□□□ -0.65
USP54-201ENST00000339859 SLC8A2Q9UPR5 921 aa11□□□□□ -0.65
USP54-201ENST00000339859 UBE4BO95155 1302 aa11□□□□□ -0.65
USP54-201ENST00000339859 YDJCA8MPS7 323 aa11□□□□□ -0.65
USP54-201ENST00000339859 CABYRO75952 493 aa11□□□□□ -0.65
USP54-201ENST00000339859 NR3C1P04150 777 aa11□□□□□ -0.65
USP54-201ENST00000339859 BIRC2Q13490 618 aa11□□□□□ -0.65
USP54-201ENST00000339859 CUL4BQ13620 913 aa11□□□□□ -0.65
USP54-201ENST00000339859 KIF12Q96FN5 646 aa11□□□□□ -0.65
USP54-201ENST00000339859 CEP63Q96MT8 703 aa11□□□□□ -0.65
USP54-201ENST00000339859 ABHD16BQ9H3Z7 469 aa11□□□□□ -0.65
USP54-201ENST00000339859 IKBKBO14920 756 aa11□□□□□ -0.65
USP54-201ENST00000339859 ADCY3O60266 1144 aa11□□□□□ -0.65
USP54-201ENST00000339859 PLS3P13797 630 aa11□□□□□ -0.65
USP54-201ENST00000339859 TUBB2AQ13885 445 aa11□□□□□ -0.65
USP54-201ENST00000339859 GADD45GIP1Q8TAE8 222 aaPredicted RBP11□□□□□ -0.65
USP54-201ENST00000339859 PPP1R9BQ96SB3 815 aa11□□□□□ -0.65
USP54-201ENST00000339859 TUBB2BQ9BVA1 445 aa11□□□□□ -0.65
USP54-201ENST00000339859 IFIH1Q9BYX4 1025 aaKnown RBP11□□□□□ -0.65
USP54-201ENST00000339859 RGPD5Q99666 1765 aa11□□□□□ -0.65
USP54-201ENST00000339859 MUTP22033 750 aa11□□□□□ -0.65
USP54-201ENST00000339859 U2AF2P26368 475 aaKnown RBP eCLIP11□□□□□ -0.65
USP54-201ENST00000339859 GBP1P32455 592 aa11□□□□□ -0.65
USP54-201ENST00000339859 DCAF4L1Q3SXM0 396 aa11□□□□□ -0.65
USP54-201ENST00000339859 NAALADL2Q58DX5 795 aa11□□□□□ -0.65
USP54-201ENST00000339859 LRP10Q7Z4F1 713 aa11□□□□□ -0.65
USP54-201ENST00000339859 XPNPEP3Q9NQH7 507 aa11□□□□□ -0.65
USP54-201ENST00000339859 FANCLQ9NW38 375 aa11□□□□□ -0.65
USP54-201ENST00000339859 CDKN2AIPQ9NXV6 580 aaPredicted RBP11□□□□□ -0.65
USP54-201ENST00000339859 AMFRQ9UKV5 643 aa11□□□□□ -0.65
USP54-201ENST00000339859 IRF6O14896 467 aa11□□□□□ -0.65
USP54-201ENST00000339859 ALDH5A1P51649 535 aaPredicted RBP11□□□□□ -0.65
USP54-201ENST00000339859 SEPT8Q92599 483 aa11□□□□□ -0.65
USP54-201ENST00000339859 STMN4Q9H169 189 aaPredicted RBP11□□□□□ -0.65
USP54-201ENST00000339859 PRMT7Q9NVM4 692 aaPredicted RBP11□□□□□ -0.65
USP54-201ENST00000339859 BCCIPQ9P287 314 aaKnown RBP eCLIP11□□□□□ -0.65
USP54-201ENST00000339859 FZD1Q9UP38 647 aa11□□□□□ -0.65
USP54-201ENST00000339859 TGFB3P10600 412 aa10.99□□□□□ -0.65
USP54-201ENST00000339859 TBXAS1P24557 533 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms