RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 MFSD14BQ5SR56 506 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 ARHGAP22Q7Z5H3 698 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 GALNT15Q8N3T1 639 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 WDR66Q8TBY9 1149 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 KCNV2Q8TDN2 545 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 CCSER1Q9C0I3 900 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 NSRP1Q9H0G5 558 aaKnown RBP19.69■□□□□ 0.74
PKP3-201ENST00000331563 NOC2LQ9Y3T9 749 aaKnown RBP19.69■□□□□ 0.74
PKP3-201ENST00000331563 FAM205AQ6ZU69 1335 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 TSPY2A6NKD2 308 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 A8MUI8 341 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 GTF2IP78347 998 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 SLC18A3Q16572 532 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 FAM83BQ5T0W9 1011 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 MAEAQ7L5Y9 396 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 SCFD2Q8WU76 684 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 CENPTQ96BT3 561 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 PBKQ96KB5 322 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 SUDS3Q9H7L9 328 aaPredicted RBP19.69■□□□□ 0.74
PKP3-201ENST00000331563 RBAK-RBAKDNI3L0D1 243 aa19.68■□□□□ 0.74
PKP3-201ENST00000331563 HGSO14964 777 aaPredicted RBP19.68■□□□□ 0.74
PKP3-201ENST00000331563 ITGA4P13612 1032 aa19.68■□□□□ 0.74
PKP3-201ENST00000331563 USP4Q13107 963 aa19.68■□□□□ 0.74
PKP3-201ENST00000331563 TAF11Q15544 211 aa19.68■□□□□ 0.74
PKP3-201ENST00000331563 LSM14BQ9BX40 385 aaKnown RBP19.68■□□□□ 0.74
PKP3-201ENST00000331563 RNF8O76064 485 aa19.68■□□□□ 0.74
PKP3-201ENST00000331563 EIF3BP55884 814 aaKnown RBP19.68■□□□□ 0.74
PKP3-201ENST00000331563 PFKFB3Q16875 520 aaPredicted RBP19.68■□□□□ 0.74
PKP3-201ENST00000331563 ANKRD20A2Q5SQ80 823 aa19.68■□□□□ 0.74
PKP3-201ENST00000331563 ANKRD20A1Q5TYW2 823 aa19.68■□□□□ 0.74
PKP3-201ENST00000331563 ANKRD20A3Q5VUR7 823 aa19.68■□□□□ 0.74
PKP3-201ENST00000331563 ZNF772Q68DY9 489 aaPredicted RBP19.68■□□□□ 0.74
PKP3-201ENST00000331563 CENPPQ6IPU0 288 aa19.68■□□□□ 0.74
PKP3-201ENST00000331563 PIGWQ7Z7B1 504 aa19.68■□□□□ 0.74
PKP3-201ENST00000331563 ZFAND2BQ8WV99 257 aa19.68■□□□□ 0.74
PKP3-201ENST00000331563 FMO2Q99518 471 aa19.68■□□□□ 0.74
PKP3-201ENST00000331563 OSBPL1AQ9BXW6 950 aa19.68■□□□□ 0.74
PKP3-201ENST00000331563 ATP6V0A2Q9Y487 856 aa19.68■□□□□ 0.74
PKP3-201ENST00000331563 MYH7BA7E2Y1 1941 aa19.68■□□□□ 0.74
PKP3-201ENST00000331563 USP17L3A6NCW0 530 aa19.67■□□□□ 0.74
PKP3-201ENST00000331563 USP17L4A6NCW7 530 aa19.67■□□□□ 0.74
PKP3-201ENST00000331563 TLR2O60603 784 aa19.67■□□□□ 0.74
PKP3-201ENST00000331563 ATP2A2P16615 1042 aaKnown RBP19.67■□□□□ 0.74
PKP3-201ENST00000331563 KIF5BP33176 963 aa19.67■□□□□ 0.74
PKP3-201ENST00000331563 LACTBP83111 547 aaPredicted RBP19.67■□□□□ 0.74
PKP3-201ENST00000331563 ATP11AP98196 1134 aa19.67■□□□□ 0.74
PKP3-201ENST00000331563 MKRN4PQ13434 485 aaPredicted RBP19.67■□□□□ 0.74
PKP3-201ENST00000331563 DYMQ7RTS9 669 aa19.67■□□□□ 0.74
PKP3-201ENST00000331563 USP17L1Q7RTZ2 530 aa19.67■□□□□ 0.74
PKP3-201ENST00000331563 FAM133AQ8N9E0 248 aa19.67■□□□□ 0.74
PKP3-201ENST00000331563 RGS16O15492 202 aaPredicted RBP19.67■□□□□ 0.74
PKP3-201ENST00000331563 ABL2P42684 1182 aa19.67■□□□□ 0.74
PKP3-201ENST00000331563 SPTY2D1Q68D10 685 aaPredicted RBP19.67■□□□□ 0.74
PKP3-201ENST00000331563 DYDC1Q8WWB3 177 aa19.67■□□□□ 0.74
PKP3-201ENST00000331563 TLCD1Q96CP7 247 aa19.67■□□□□ 0.74
PKP3-201ENST00000331563 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.67■□□□□ 0.745e-7■■■□□ 18.9
PKP3-201ENST00000331563 CUEDC2Q9H467 287 aa19.67■□□□□ 0.74
PKP3-201ENST00000331563 ATP8A2Q9NTI2 1148 aa19.67■□□□□ 0.74
PKP3-201ENST00000331563 DDAH1O94760 285 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 SHBGP04278 402 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 MYBL1P10243 752 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 RXRBP28702 533 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 BTDP43251 543 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 MTFR1LQ9H019 292 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 CEP72Q9P209 647 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 PPEF1O14829 653 aaPredicted RBP19.66■□□□□ 0.74
PKP3-201ENST00000331563 BBOX1O75936 387 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 USP11P51784 963 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 NCALDP61601 193 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 TFAP4Q01664 338 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 IFI16Q16666 785 aaKnown RBP19.66■□□□□ 0.74
PKP3-201ENST00000331563 DAAM2Q86T65 1068 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 DNAAF5Q86Y56 855 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 UHMK1Q8TAS1 419 aaKnown RBP19.66■□□□□ 0.74
PKP3-201ENST00000331563 KCNQ5Q9NR82 932 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 STXBP3O00186 592 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 KRT16P08779 473 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 ACTRT1Q8TDG2 376 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 C7orf25Q9BPX7 421 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 GORASP1Q9BQQ3 440 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 AZI2Q9H6S1 392 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 FAM114A2Q9NRY5 505 aa19.66■□□□□ 0.74
PKP3-201ENST00000331563 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.66■□□□□ 0.742e-6■■■■□ 20.8
PKP3-201ENST00000331563 RARAP10276 462 aa19.65■□□□□ 0.74
PKP3-201ENST00000331563 ATP2B4P23634 1241 aa19.65■□□□□ 0.74
PKP3-201ENST00000331563 KCNMA1Q12791 1236 aa19.65■□□□□ 0.74
PKP3-201ENST00000331563 DENND2CQ68D51 928 aa19.65■□□□□ 0.74
PKP3-201ENST00000331563 RBM12BQ8IXT5 1001 aaKnown RBP19.65■□□□□ 0.74
PKP3-201ENST00000331563 METTL13Q8N6R0 699 aa19.65■□□□□ 0.74
PKP3-201ENST00000331563 ATXN2LQ8WWM7 1075 aaKnown RBP19.65■□□□□ 0.74
PKP3-201ENST00000331563 TRIM51Q9BSJ1 452 aa19.65■□□□□ 0.74
PKP3-201ENST00000331563 EDEM3Q9BZQ6 932 aa19.65■□□□□ 0.74
PKP3-201ENST00000331563 MAGEF1Q9HAY2 307 aa19.65■□□□□ 0.74
PKP3-201ENST00000331563 PCDHA4Q9UN74 947 aa19.65■□□□□ 0.74
PKP3-201ENST00000331563 PCDHGA4Q9Y5G9 962 aa19.65■□□□□ 0.74
PKP3-201ENST00000331563 CCDC188H7C350 402 aa19.65■□□□□ 0.74
PKP3-201ENST00000331563 SLURP2P0DP57 97 aa19.65■□□□□ 0.74
PKP3-201ENST00000331563 PEX26Q7Z412 305 aa19.65■□□□□ 0.74
PKP3-201ENST00000331563 RBM41Q96IZ5 413 aaKnown RBP19.65■□□□□ 0.74
PKP3-201ENST00000331563 IFT74Q96LB3 600 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms