RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TOM1O60784 492 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 SPATA5Q8NB90 893 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 CLMNQ96JQ2 1002 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 RAB21Q9UL25 225 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 APOBEC2Q9Y235 224 aaKnown RBP7.55□□□□□ -1.2
SMC1A-201ENST00000322213 USTQ9Y2C2 406 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 COBLO75128 1261 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 TECP42680 631 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 CCDC15Q0P6D6 951 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 HIC1Q14526 733 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 KRT81Q14533 505 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 TEDDM1Q5T9Z0 273 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 FAM47EQ6ZV65 393 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 UHMK1Q8TAS1 419 aaKnown RBP7.55□□□□□ -1.2
SMC1A-201ENST00000322213 ZNFX1Q9P2E3 1918 aaKnown RBP7.55□□□□□ -1.2
SMC1A-201ENST00000322213 FAM47DPA6NHR8 397 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 HAUS5O94927 633 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 DNAL1Q4LDG9 190 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 PPARGC1AQ9UBK2 798 aaKnown RBP7.55□□□□□ -1.2
SMC1A-201ENST00000322213 STRIP2Q9ULQ0 834 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 SLC4A7Q9Y6M7 1214 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 UBR1Q8IWV7 1749 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 NCAPD2Q15021 1401 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 SASH1O94885 1247 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 STAG2Q8N3U4 1231 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 DRAXINQ8NBI3 349 aaPredicted RBP7.55□□□□□ -1.2
SMC1A-201ENST00000322213 RBBP8NLQ8NC74 664 aaPredicted RBP7.55□□□□□ -1.2
SMC1A-201ENST00000322213 EEF2KMTQ96G04 330 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 NAF1Q96HR8 494 aaKnown RBP7.55□□□□□ -1.2
SMC1A-201ENST00000322213 ING2Q9H160 280 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.55□□□□□ -1.2
SMC1A-201ENST00000322213 MT-ND3P03897 115 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 PPARAQ07869 468 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 ARHGAP44Q17R89 818 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 CC2D2BQ6DHV5 1058 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 MMGT1Q8N4V1 131 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 TC2NQ8N9U0 490 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 SH2B2O14492 632 aaPredicted RBP7.55□□□□□ -1.2
SMC1A-201ENST00000322213 SLC12A2P55011 1212 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 ATP11CQ8NB49 1132 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 ARMT1Q9H993 441 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 L1RE1Q9UN81 338 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 DNAJC6O75061 913 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 TSGA10IPQ3SY00 556 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 ZCWPW2Q504Y3 356 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 RPGRQ92834 1020 aaKnown RBP7.55□□□□□ -1.2
SMC1A-201ENST00000322213 ZFRQ96KR1 1074 aaKnown RBP7.55□□□□□ -1.2
SMC1A-201ENST00000322213 ZIM3Q96PE6 472 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 EHD2Q9NZN4 543 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 SLIT1O75093 1534 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 FAM187AA6NFU0 413 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 CA8P35219 290 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 MAGEA8P43361 318 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 Q4G0T1 1027 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 TMEM259Q4ZIN3 620 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 CAPN12Q6ZSI9 719 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 C1orf112Q9NSG2 853 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 BIN2Q9UBW5 565 aaPredicted RBP7.54□□□□□ -1.2
SMC1A-201ENST00000322213 ZNF229Q9UJW7 825 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 MAP3K15Q6ZN16 1313 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 ABLIM1O14639 778 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 YWHAEP62258 255 aaKnown RBP7.54□□□□□ -1.2
SMC1A-201ENST00000322213 TRMT10CQ7L0Y3 403 aaKnown RBP7.54□□□□□ -1.2
SMC1A-201ENST00000322213 RNF169Q8NCN4 708 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 EAF2Q96CJ1 260 aaPredicted RBP7.54□□□□□ -1.2
SMC1A-201ENST00000322213 PRDM11Q9NQV5 511 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 ALKQ9UM73 1620 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 NCF2P19878 526 aaPredicted RBP7.54□□□□□ -1.2
SMC1A-201ENST00000322213 YWHAGP61981 247 aaKnown RBP eCLIP7.54□□□□□ -1.2
SMC1A-201ENST00000322213 MRPS15P82914 257 aaKnown RBP7.54□□□□□ -1.2
SMC1A-201ENST00000322213 BFSP1Q12934 665 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 SYDE1Q6ZW31 735 aaPredicted RBP7.54□□□□□ -1.2
SMC1A-201ENST00000322213 ADGRA3Q8IWK6 1321 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 HEATR5AQ86XA9 2040 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 SYCE1LA8MT33 242 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 PLCG1P19174 1290 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 MAP4P27816 1152 aaKnown RBP7.54□□□□□ -1.2
SMC1A-201ENST00000322213 ADCY1Q08828 1119 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 MESDQ14696 234 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 OLFML1Q6UWY5 402 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 MLXIPQ9HAP2 919 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 PCDHB13Q9Y5F0 798 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 TTC26A0AVF1 554 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 GYPCP04921 128 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 PODNQ7Z5L7 613 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 PYROXD1Q8WU10 500 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 PARVBQ9HBI1 364 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 SH3GLB2Q9NR46 395 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 DCTN4Q9UJW0 460 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 LRRC53A6NM62 1247 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 RNMTO43148 476 aaKnown RBP7.54□□□□□ -1.2
SMC1A-201ENST00000322213 SKAP2O75563 359 aaPredicted RBP7.54□□□□□ -1.2
SMC1A-201ENST00000322213 VIL1P09327 827 aaKnown RBP7.54□□□□□ -1.2
SMC1A-201ENST00000322213 MAPK4P31152 587 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 METTL16Q86W50 562 aaKnown RBP7.54□□□□□ -1.2
SMC1A-201ENST00000322213 CROCCP3Q8IVE0 287 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 CDAN1Q8IWY9 1227 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 MAGEC3Q8TD91 643 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 NPHS2Q9NP85 383 aa7.54□□□□□ -1.2
SMC1A-201ENST00000322213 ANKRD36A6QL64 1941 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms