RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 SUN1O94901 812 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 FAM163BP0C2L3 166 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 TNFAIP1Q13829 316 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 CRACR2BQ8N4Y2 399 aaPredicted RBP12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 TRPM4Q8TD43 1214 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 SYT15Q9BQS2 421 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 SIKE1Q9BRV8 207 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 KRT23Q9C075 422 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 MKNK2Q9HBH9 465 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 CTTNBP2NLQ9P2B4 639 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 FAM198AQ9UFP1 575 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 HACL1Q9UJ83 578 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 ADAMTSL1Q8N6G6 1762 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 TIAM2Q8IVF5 1701 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 MOCS3O95396 460 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 GYPCP04921 128 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 SERPINB3P29508 390 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 ADAM9Q13443 819 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 SPATA1Q5VX52 437 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 CCDC65Q8IXS2 484 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 ZBED3Q96IU2 234 aaPredicted RBP12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 TSPAN18Q96SJ8 248 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 DHX36Q9H2U1 1008 aaKnown RBP12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 ZNF287Q9HBT7 754 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 DICER1Q9UPY3 1922 aaKnown RBP12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 PRDM1O75626 825 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 GHRP10912 638 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 TNNC1P63316 161 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 AMPD2Q01433 879 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 PTPROQ16827 1216 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 C6orf89Q6UWU4 347 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 TRIM50Q86XT4 487 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 FAM133AQ8N9E0 248 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 CDK5RAP3Q96JB5 506 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 NACA2Q9H009 215 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 ZWILCHQ9H900 591 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 DUSP10Q9Y6W6 482 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 NCK2O43639 380 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 EIF4BP23588 611 aaKnown RBP12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 ABL2P42684 1182 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 PLCD1P51178 756 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 METTL16Q86W50 562 aaKnown RBP12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 KRI1Q8N9T8 703 aaKnown RBP12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 CCT6BQ92526 530 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 STMN2Q93045 179 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 ZNF653Q96CK0 615 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 DYNLL2Q96FJ2 89 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 IWS1Q96ST2 819 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 IFIH1Q9BYX4 1025 aaKnown RBP12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 DAAM1Q9Y4D1 1078 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 IQCA1LA6NCM1 817 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 B4E1Z4 1266 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 SMIM22K7EJ46 135 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 RANBP6O60518 1105 aaKnown RBP12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 NPM3O75607 178 aaKnown RBP12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 ALOX15P16050 662 aaPredicted RBP12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 VPS41P49754 854 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 SPAG1Q07617 926 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 FKBP1CQ5VVH2 108 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 ZFPM1Q8IX07 1006 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 TMCO5AQ8N6Q1 288 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 HSD3B7Q9H2F3 369 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 LRWD1Q9UFC0 647 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 TSC22D4Q9Y3Q8 395 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 NEDD4P46934 1319 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 RXRAP19793 462 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 SP100P23497 879 aaPredicted RBP12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 CACNA2D1P54289 1103 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 SLC39A14Q15043 492 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 ANKRD42Q8N9B4 389 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 SMC1BQ8NDV3 1235 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 ZFAND2BQ8WV99 257 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 FAM151AQ8WW52 585 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 ESR2Q92731 530 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 L3MBTL3Q96JM7 780 aaPredicted RBP12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 RASAL2Q9UJF2 1139 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 TUBE1Q9UJT0 475 aa12.63□□□□□ -0.39
LDLRAD3-201ENST00000315571 PCP11498 1178 aaKnown RBP12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 EVX2Q03828 476 aa12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 ITGB3BPQ13352 177 aaPredicted RBP12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 TRIM14Q14142 442 aa12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 ANGEL2Q5VTE6 544 aaKnown RBP12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 MS4A14Q96JA4 679 aa12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 DMAP1Q9NPF5 467 aaPredicted RBP12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 LNPEPQ9UIQ6 1025 aa12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 SLC4A7Q9Y6M7 1214 aa12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 A0A1B0GTH6 734 aa12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 MCL1Q07820 350 aa12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 ANO7Q6IWH7 933 aa12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 ATP11CQ8NB49 1132 aa12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 WDR60Q8WVS4 1066 aa12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 XPO6Q96QU8 1125 aaKnown RBP12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 CSRNP1Q96S65 589 aa12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 RBM12Q9NTZ6 932 aaKnown RBP12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 ABCF3Q9NUQ8 709 aa12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 GGA3Q9NZ52 723 aa12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 KLHL14Q9P2G3 628 aa12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 SERPINB13Q9UIV8 391 aa12.62□□□□□ -0.39
LDLRAD3-201ENST00000315571 ZNF24P17028 368 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms