RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 RPS6KA5O75582 802 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 VTNP04004 478 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 RPA1P27694 616 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 MBTPS1Q14703 1052 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 TARBP2Q15633 366 aaKnown RBP22.12■■□□□ 1.13
VEGFB-201ENST00000309422 RASIP1Q5U651 963 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 GPR153Q6NV75 609 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 SPRYD3Q8NCJ5 442 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 PPP1R16BQ96T49 567 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 MTRQ99707 1265 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 ATP6V0A4Q9HBG4 840 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 RNF216Q9NWF9 866 aaPredicted RBP22.12■■□□□ 1.13
VEGFB-201ENST00000309422 CXXC1Q9P0U4 656 aaPredicted RBP22.12■■□□□ 1.13
VEGFB-201ENST00000309422 MTMR6Q9Y217 621 aa22.12■■□□□ 1.13
VEGFB-201ENST00000309422 TMEM150BA6NC51 233 aa22.11■■□□□ 1.13
VEGFB-201ENST00000309422 VWA3AA6NCI4 1184 aa22.11■■□□□ 1.13
VEGFB-201ENST00000309422 GPR182O15218 404 aa22.11■■□□□ 1.13
VEGFB-201ENST00000309422 DGAT1O75907 488 aa22.11■■□□□ 1.13
VEGFB-201ENST00000309422 XRCC6P12956 609 aaKnown RBP eCLIP22.11■■□□□ 1.13
VEGFB-201ENST00000309422 CRYBB1P53674 252 aaPredicted RBP22.11■■□□□ 1.13
VEGFB-201ENST00000309422 WDR5P61964 334 aaKnown RBP22.11■■□□□ 1.13
VEGFB-201ENST00000309422 LPIN1Q14693 890 aa22.11■■□□□ 1.13
VEGFB-201ENST00000309422 EMC2Q15006 297 aa22.11■■□□□ 1.13
VEGFB-201ENST00000309422 KIZQ2M2Z5 673 aa22.11■■□□□ 1.13
VEGFB-201ENST00000309422 PSPC1Q8WXF1 523 aaKnown RBP22.11■■□□□ 1.13
VEGFB-201ENST00000309422 OSMRQ99650 979 aa22.11■■□□□ 1.13
VEGFB-201ENST00000309422 SUCLA2Q9P2R7 463 aaPredicted RBP22.11■■□□□ 1.13
VEGFB-201ENST00000309422 MYH9P35579 1960 aaKnown RBP22.1■■□□□ 1.13
VEGFB-201ENST00000309422 ARHGEF35A5YM69 484 aa22.1■■□□□ 1.13
VEGFB-201ENST00000309422 NPEPPSP55786 919 aa22.1■■□□□ 1.13
VEGFB-201ENST00000309422 NLRP11P59045 1033 aaKnown RBP22.1■■□□□ 1.13
VEGFB-201ENST00000309422 NFX1Q12986 1120 aaKnown RBP22.1■■□□□ 1.13
VEGFB-201ENST00000309422 SF3A1Q15459 793 aaKnown RBP22.1■■□□□ 1.13
VEGFB-201ENST00000309422 ZRSR1Q15695 479 aaKnown RBP22.1■■□□□ 1.13
VEGFB-201ENST00000309422 CATSPER3Q86XQ3 398 aa22.1■■□□□ 1.13
VEGFB-201ENST00000309422 MYOCDQ8IZQ8 938 aa22.1■■□□□ 1.13
VEGFB-201ENST00000309422 AK8Q96MA6 479 aa22.1■■□□□ 1.13
VEGFB-201ENST00000309422 ZNF396Q96N95 335 aaPredicted RBP22.1■■□□□ 1.13
VEGFB-201ENST00000309422 SH2D3AQ9BRG2 576 aa22.1■■□□□ 1.13
VEGFB-201ENST00000309422 GCOM2Q9BZD3 368 aaPredicted RBP22.1■■□□□ 1.13
VEGFB-201ENST00000309422 INO80BQ9C086 356 aaPredicted RBP22.1■■□□□ 1.13
VEGFB-201ENST00000309422 WRAP73Q9P2S5 460 aaPredicted RBP22.1■■□□□ 1.13
VEGFB-201ENST00000309422 TMEM265A0A087WTH1 108 aa22.09■■□□□ 1.13
VEGFB-201ENST00000309422 RESTQ13127 1097 aa22.09■■□□□ 1.13
VEGFB-201ENST00000309422 POTEGQ6S5H5 508 aa22.09■■□□□ 1.13
VEGFB-201ENST00000309422 ZNF410Q86VK4 478 aa22.09■■□□□ 1.13
VEGFB-201ENST00000309422 RHPN2Q8IUC4 686 aa22.09■■□□□ 1.13
VEGFB-201ENST00000309422 C4orf32Q8N8J7 132 aa22.09■■□□□ 1.13
VEGFB-201ENST00000309422 IGSF22Q8N9C0 903 aa22.09■■□□□ 1.13
VEGFB-201ENST00000309422 TIFAQ96CG3 184 aa22.09■■□□□ 1.13
VEGFB-201ENST00000309422 LRCH3Q96II8 777 aa22.09■■□□□ 1.13
VEGFB-201ENST00000309422 NT5C3AQ9H0P0 336 aa22.09■■□□□ 1.13
VEGFB-201ENST00000309422 BMP2KQ9NSY1 1161 aaPredicted RBP22.09■■□□□ 1.13
VEGFB-201ENST00000309422 RANBP2P49792 3224 aaKnown RBP22.09■■□□□ 1.13
VEGFB-201ENST00000309422 TRIOBPQ9H2D6 2365 aa22.09■■□□□ 1.13
VEGFB-201ENST00000309422 SFPQP23246 707 aaKnown RBP eCLIP22.08■■□□□ 1.12
VEGFB-201ENST00000309422 DNAJB2P25686 324 aa22.08■■□□□ 1.12
VEGFB-201ENST00000309422 CD52P31358 61 aa22.08■■□□□ 1.12
VEGFB-201ENST00000309422 TXLNAP40222 546 aa22.08■■□□□ 1.12
VEGFB-201ENST00000309422 TFDP1Q14186 410 aa22.08■■□□□ 1.12
VEGFB-201ENST00000309422 MCPH1Q8NEM0 835 aa22.08■■□□□ 1.12
VEGFB-201ENST00000309422 PIGOQ8TEQ8 1089 aa22.08■■□□□ 1.12
VEGFB-201ENST00000309422 NLRP4Q96MN2 994 aa22.08■■□□□ 1.12
VEGFB-201ENST00000309422 DAXXQ9UER7 740 aaPredicted RBP22.08■■□□□ 1.12
VEGFB-201ENST00000309422 DBR1Q9UK59 544 aaKnown RBP22.08■■□□□ 1.12
VEGFB-201ENST00000309422 DENND3A2RUS2 1198 aa22.07■■□□□ 1.12
VEGFB-201ENST00000309422 SOX1O00570 391 aaPredicted RBP22.07■■□□□ 1.12
VEGFB-201ENST00000309422 TLL1O43897 1013 aa22.07■■□□□ 1.12
VEGFB-201ENST00000309422 USO1O60763 962 aaKnown RBP22.07■■□□□ 1.12
VEGFB-201ENST00000309422 MED24O75448 989 aa22.07■■□□□ 1.12
VEGFB-201ENST00000309422 STBD1O95210 358 aa22.07■■□□□ 1.12
VEGFB-201ENST00000309422 UBA7P41226 1012 aa22.07■■□□□ 1.12
VEGFB-201ENST00000309422 RARRES1P49788 294 aa22.07■■□□□ 1.12
VEGFB-201ENST00000309422 GPC3P51654 580 aa22.07■■□□□ 1.12
VEGFB-201ENST00000309422 GPNMBQ14956 572 aa22.07■■□□□ 1.12
VEGFB-201ENST00000309422 HERC6Q8IVU3 1022 aa22.07■■□□□ 1.12
VEGFB-201ENST00000309422 LINC01465Q8N7H1 131 aa22.07■■□□□ 1.12
VEGFB-201ENST00000309422 CALML4Q96GE6 196 aa22.07■■□□□ 1.12
VEGFB-201ENST00000309422 DHX33Q9H6R0 707 aaKnown RBP22.07■■□□□ 1.12
VEGFB-201ENST00000309422 PADI3Q9ULW8 664 aa22.07■■□□□ 1.12
VEGFB-201ENST00000309422 DNM3Q9UQ16 869 aa22.07■■□□□ 1.12
VEGFB-201ENST00000309422 PCDHA11Q9Y5I1 949 aa22.07■■□□□ 1.12
VEGFB-201ENST00000309422 COL4A3BPQ9Y5P4 624 aa22.07■■□□□ 1.12
VEGFB-201ENST00000309422 IGKV6-21A0A0C4DH24 114 aa22.06■■□□□ 1.12
VEGFB-201ENST00000309422 ASAP2O43150 1006 aa22.06■■□□□ 1.12
VEGFB-201ENST00000309422 MXD4Q14582 209 aaPredicted RBP22.06■■□□□ 1.12
VEGFB-201ENST00000309422 KCTD17Q8N5Z5 321 aa22.06■■□□□ 1.12
VEGFB-201ENST00000309422 SLC28A3Q9HAS3 691 aa22.06■■□□□ 1.12
VEGFB-201ENST00000309422 DDX19AQ9NUU7 478 aaKnown RBP22.06■■□□□ 1.12
VEGFB-201ENST00000309422 KIAA1024Q9UPX6 916 aa22.06■■□□□ 1.12
VEGFB-201ENST00000309422 TRIP12Q14669 1992 aaPredicted RBP22.05■■□□□ 1.12
VEGFB-201ENST00000309422 SLC26A4O43511 780 aa22.05■■□□□ 1.12
VEGFB-201ENST00000309422 SPATA31C1P0DKV0 1188 aa22.05■■□□□ 1.12
VEGFB-201ENST00000309422 ZSCAN22P10073 491 aaPredicted RBP22.05■■□□□ 1.12
VEGFB-201ENST00000309422 ZSCAN20P17040 1043 aaPredicted RBP22.05■■□□□ 1.12
VEGFB-201ENST00000309422 EIF4BP23588 611 aaKnown RBP22.05■■□□□ 1.12
VEGFB-201ENST00000309422 LONP1P36776 959 aaKnown RBP22.05■■□□□ 1.12
VEGFB-201ENST00000309422 STK38Q15208 465 aa22.05■■□□□ 1.12
VEGFB-201ENST00000309422 TMEM143Q96AN5 459 aa22.05■■□□□ 1.12
VEGFB-201ENST00000309422 VWCEQ96DN2 955 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms