RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 JPH1Q9HDC5 661 aaPredicted RBP9.2□□□□□ -0.94
CHD6-201ENST00000309279 ENAMQ9NRM1 1142 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 INTUQ9ULD6 942 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 PRKAB1Q9Y478 270 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 RBM19Q9Y4C8 960 aaKnown RBP9.2□□□□□ -0.94
CHD6-201ENST00000309279 MOXD2PA6NHM9 499 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 PSMD10O75832 226 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 MMP3P08254 477 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 BEX3Q00994 111 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 SLC20A2Q08357 652 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 PKP1Q13835 747 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 BRDTQ58F21 947 aaPredicted RBP9.2□□□□□ -0.94
CHD6-201ENST00000309279 TTC38Q5R3I4 469 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 B3GNT9Q6UX72 402 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 SPATA33Q96N06 139 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 MTMR9Q96QG7 549 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 GPR20Q99678 358 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 SDF4Q9BRK5 362 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 SLC9A2Q9UBY0 812 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 PHF24Q9UPV7 400 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 SCN10AQ9Y5Y9 1956 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 MYH15Q9Y2K3 1946 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 TRIM64CA6NLI5 447 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 KBTBD13C9JR72 458 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 ZEB2O60315 1214 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 NEMFO60524 1076 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 KPNA6O60684 536 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 ASGR1P07306 291 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 ZSCAN22P10073 491 aaPredicted RBP9.19□□□□□ -0.94
CHD6-201ENST00000309279 MCM7P33993 719 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 ACLYP53396 1101 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 PURAQ00577 322 aaKnown RBP9.19□□□□□ -0.94
CHD6-201ENST00000309279 ZNF174Q15697 407 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 DGKDQ16760 1214 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 POTEDQ86YR6 584 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 SLFN12Q8IYM2 578 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 C4orf32Q8N8J7 132 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 SEPT1Q8WYJ6 367 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.19□□□□□ -0.94
CHD6-201ENST00000309279 PKD2L1Q9P0L9 805 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 TMEM63CQ9P1W3 806 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 PCDHB6Q9Y5E3 794 aa9.19□□□□□ -0.94
CHD6-201ENST00000309279 MYH9P35579 1960 aaKnown RBP9.18□□□□□ -0.94
CHD6-201ENST00000309279 IGKV6D-21A0A0A0MT36 114 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 GSTTP1A0A1W2PQM5 241 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 LAD1O00515 517 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 NOP56O00567 594 aaKnown RBP9.18□□□□□ -0.94
CHD6-201ENST00000309279 GAS7O60861 476 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 CABYRO75952 493 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 CCNE2O96020 404 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 CTHP32929 405 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 SOX10P56693 466 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 KRT76Q01546 638 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 PPP2R5CQ13362 524 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 E2F5Q15329 346 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 CALCRLQ16602 461 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 PLEKHG4Q58EX7 1191 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 LRCH2Q5VUJ6 765 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 ABHD15Q6UXT9 468 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 SMAP1Q8IYB5 467 aaPredicted RBP9.18□□□□□ -0.94
CHD6-201ENST00000309279 GJA10Q969M2 543 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 C16orf70Q9BSU1 422 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 TMEM60Q9H2L4 133 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 ZNF69Q9UC07 566 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 VAV3Q9UKW4 847 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 TMCC3Q9ULS5 477 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 ZDHHC9Q9Y397 364 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 FARP1Q9Y4F1 1045 aaPredicted RBP9.18□□□□□ -0.94
CHD6-201ENST00000309279 TELO2Q9Y4R8 837 aa9.18□□□□□ -0.94
CHD6-201ENST00000309279 ELP1O95163 1332 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 A0A1W2PQ45 241 aaPredicted RBP9.17□□□□□ -0.94
CHD6-201ENST00000309279 A0A1W2PQY0 241 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 PRSS47A8MTI9 375 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 SORBS3O60504 671 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 BAG4O95429 457 aaKnown RBP9.17□□□□□ -0.94
CHD6-201ENST00000309279 F13A1P00488 732 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 F2P00734 622 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 KRT18P05783 430 aaKnown RBP9.17□□□□□ -0.94
CHD6-201ENST00000309279 SFNP31947 248 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 NOS2P35228 1153 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 ACTR2P61160 394 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 SPIRE1Q08AE8 756 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 PTGDRQ13258 359 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 C1orf53Q5VUE5 145 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 ARMC3Q5W041 872 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 IQCEQ6IPM2 695 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 CXCL17Q6UXB2 119 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 NECAB2Q7Z6G3 386 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 RDM1Q8NG50 284 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 DIS3LQ8TF46 1054 aaKnown RBP9.17□□□□□ -0.94
CHD6-201ENST00000309279 KAT2BQ92831 832 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 PAWRQ96IZ0 340 aaKnown RBP9.17□□□□□ -0.94
CHD6-201ENST00000309279 GLT1D1Q96MS3 346 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 UIMC1Q96RL1 719 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 TMUB1Q9BVT8 246 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 TEKT3Q9BXF9 490 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 PPCSQ9HAB8 311 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 PCDHA12Q9UN75 941 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 PCDHA10Q9Y5I2 948 aa9.17□□□□□ -0.94
CHD6-201ENST00000309279 EMSYQ7Z589 1322 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms