RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 KRT26Q7Z3Y9 468 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 KCNK18Q7Z418 384 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 CD302Q8IX05 232 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 MREGQ8N565 214 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 RNF10Q8N5U6 811 aaKnown RBP11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 SNX29Q8TEQ0 813 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 HPS3Q969F9 1004 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 MLXIPQ9HAP2 919 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 ZNF112Q9UJU3 913 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 GCOM1H8Y6P7 765 aaPredicted RBP11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 WDR46O15213 610 aaKnown RBP11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 NEBLO76041 1014 aa11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 POLR2MP0CAP2 368 aa11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 EIF4A3P38919 411 aaKnown RBP11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 LIG3P49916 1009 aa11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 USP11P51784 963 aa11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 RWDD2BP57060 319 aa11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 AMPD3Q01432 767 aa11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 GRB10Q13322 594 aa11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 TMEM266Q2M3C6 531 aa11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 VWA3BQ502W6 1294 aa11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 KDM7AQ6ZMT4 941 aa11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 YTHDF3Q7Z739 585 aaKnown RBP11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 SULF1Q8IWU6 871 aa11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 IFT20Q8IY31 132 aa11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 SMCR8Q8TEV9 937 aaPredicted RBP11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 TATDN2Q93075 761 aa11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 ARL8AQ96BM9 186 aa11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 ATG4CQ96DT6 458 aa11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 JPH2Q9BR39 696 aaPredicted RBP11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 GLT8D2Q9H1C3 349 aa11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 GDF3Q9NR23 364 aa11.27□□□□□ -0.6
APOBEC3F-201ENST00000308521 SSC5DA1L4H1 1573 aa11.27□□□□□ -0.61
APOBEC3F-201ENST00000308521 SRRM3A6NNA2 597 aaPredicted RBP11.27□□□□□ -0.61
APOBEC3F-201ENST00000308521 PLEKP08567 350 aaPredicted RBP11.27□□□□□ -0.61
APOBEC3F-201ENST00000308521 STK4Q13043 487 aa11.27□□□□□ -0.61
APOBEC3F-201ENST00000308521 AP3B2Q13367 1082 aa11.27□□□□□ -0.61
APOBEC3F-201ENST00000308521 CENPPQ6IPU0 288 aa11.27□□□□□ -0.61
APOBEC3F-201ENST00000308521 CNNM4Q6P4Q7 775 aa11.27□□□□□ -0.61
APOBEC3F-201ENST00000308521 NFRKBQ6P4R8 1299 aa11.27□□□□□ -0.61
APOBEC3F-201ENST00000308521 IQCKQ8N0W5 287 aa11.27□□□□□ -0.61
APOBEC3F-201ENST00000308521 ARMC2Q8NEN0 867 aa11.27□□□□□ -0.61
APOBEC3F-201ENST00000308521 LPAR1Q92633 364 aa11.27□□□□□ -0.61
APOBEC3F-201ENST00000308521 N4BP2L2Q92802 583 aaPredicted RBP11.27□□□□□ -0.61
APOBEC3F-201ENST00000308521 PNMA5Q96PV4 448 aa11.27□□□□□ -0.61
APOBEC3F-201ENST00000308521 PAIP2Q9BPZ3 127 aaKnown RBP11.27□□□□□ -0.61
APOBEC3F-201ENST00000308521 SPATS2LQ9NUQ6 558 aaKnown RBP11.27□□□□□ -0.61
APOBEC3F-201ENST00000308521 COL20A1Q9P218 1284 aa11.27□□□□□ -0.61
APOBEC3F-201ENST00000308521 FGFR1OPO95684 399 aaKnown RBP11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 MAGEA1P43355 309 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 FXR2P51116 673 aaKnown RBP eCLIP11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 SLC8A3P57103 927 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 TRAF1Q13077 416 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 VGLL4Q14135 290 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 ASTE1Q2TB18 679 aaPredicted RBP11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 SUPT20HL1Q3ZLR7 823 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 DPY19L2Q6NUT2 758 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 C8orf74Q6P047 294 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 DYMQ7RTS9 669 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 CRYGNQ8WXF5 182 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 LENG9Q96B70 501 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 EEF2KMTQ96G04 330 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 CALML4Q96GE6 196 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 CDK5RAP3Q96JB5 506 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 ZIM3Q96PE6 472 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 PKD2L1Q9P0L9 805 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 ODF2LQ9ULJ1 636 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 MRPL11Q9Y3B7 192 aaKnown RBP11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 RIPK3Q9Y572 518 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 DICER1Q9UPY3 1922 aaKnown RBP11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 SSU72P8A0A1W2PR75 194 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 RTN2O75298 545 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 ICAM1P05362 532 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 SSBP05455 408 aaKnown RBP eCLIP11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 SREBF1P36956 1147 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 SLC7A5Q01650 507 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 MAN2A1Q16706 1144 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 SKIDA1Q1XH10 827 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 CFAP221Q4G0U5 840 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 KRT79Q5XKE5 535 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 CALR3Q96L12 384 aaKnown RBP11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 TLR10Q9BXR5 811 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 NDST4Q9H3R1 872 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 BLOC1S4Q9NUP1 217 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 GGA2Q9UJY4 613 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 CTDP1Q9Y5B0 961 aaPredicted RBP11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 CENPFP49454 3210 aa11.26□□□□□ -0.61
APOBEC3F-201ENST00000308521 RBAK-RBAKDNI3L0D1 243 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 MSH4O15457 936 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 AKR1B10O60218 316 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 FOSP01100 380 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 ASIC1P78348 528 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 PAK2Q13177 524 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 KLHDC7AQ5VTJ3 777 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 FOXR2Q6PJQ5 311 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 MICALCLQ6ZW33 695 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 CLMNQ96JQ2 1002 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 NOX5Q96PH1 765 aa11.25□□□□□ -0.61
APOBEC3F-201ENST00000308521 NUCKS1Q9H1E3 243 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms