RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 SPECC1L-ADORA2AF8WAN1 911 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 HOXA2O43364 376 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 BUB1BO60566 1050 aaPredicted RBP8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 GPKOWQ92917 476 aaPredicted RBP eCLIP8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 EDC3Q96F86 508 aaKnown RBP8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 ZFP91Q96JP5 570 aaPredicted RBP8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 MTRQ99707 1265 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 FTOQ9C0B1 505 aaKnown RBP eCLIP8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 VPS16Q9H269 839 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 VCPKMTQ9H867 229 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 LAMB4A4D0S4 1761 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 PSMC5P62195 406 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 ADAM9Q13443 819 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 DRC3Q9H069 523 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 PIH1D3Q9NQM4 214 aaKnown RBP8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 SUCLA2Q9P2R7 463 aaPredicted RBP8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 NFE2L3Q9Y4A8 694 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 CASZ1Q86V15 1759 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 UBR2Q8IWV8 1755 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 CELF2O95319 508 aaKnown RBP8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 IFNB1P01574 187 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 ARHGAP25P42331 645 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 NOLC1Q14978 699 aaKnown RBP eCLIP8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 KRBA2Q6ZNG9 492 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 TRIM42Q8IWZ5 723 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 EFHBQ8N7U6 833 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 CCHCR1Q8TD31 782 aa8.97□□□□□ -0.97
PCDHB1-201ENST00000306549 BTBD18B2RXH4 712 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 TRIM58Q8NG06 486 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 SLC7A5P2Q9GIP4 190 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 MTMR4Q9NYA4 1195 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 FNDC3AQ9Y2H6 1198 aaKnown RBP8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 PCDHA10Q9Y5I2 948 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 NDUFAB1O14561 156 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 CLDN3O15551 220 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 GH1P01241 217 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 MYL3P08590 195 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 TGFB3P10600 412 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 NECTIN1Q15223 517 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 DGKDQ16760 1214 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 OR8K1Q8NGG5 319 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 RNF139Q8WU17 664 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 SLITRK6Q9H5Y7 841 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 EFCC1Q9HA90 598 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 PRDM10Q9NQV6 1147 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 SYNGAP1Q96PV0 1343 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 CYP2J2P51589 502 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 IGBP1P78318 339 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 PTK2BQ14289 1009 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 EXOC3L4Q17RC7 722 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 CEP55Q53EZ4 464 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 SRRM1Q8IYB3 904 aaKnown RBP8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 GLT1D1Q96MS3 346 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 SPATA33Q96N06 139 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 PIGSQ96S52 555 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 PCDHA6Q9UN73 950 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 PCDHA8Q9Y5H6 950 aa8.96□□□□□ -0.97
PCDHB1-201ENST00000306549 BRD1O95696 1058 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 GOLGA8HP0CJ92 632 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 MAGEA1P43355 309 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 OAZ1P54368 228 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 TRIM31Q9BZY9 425 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 C17orf75Q9HAS0 396 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 LRRC4Q9HBW1 653 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 P4HBP07237 508 aaKnown RBP8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 STX2P32856 288 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 EPHB1P54762 984 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 ARHGAP44Q17R89 818 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 RNF217Q8TC41 542 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 DAGLAQ9Y4D2 1042 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 IPO5O00410 1097 aaKnown RBP8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 DPYSL4O14531 572 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 OCM2P0CE71 109 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 OCMP0CE72 109 aaPredicted RBP8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 PDE1CQ14123 709 aaPredicted RBP8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 SPATA1Q5VX52 437 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 TWF2Q6IBS0 349 aaKnown RBP8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 DYMQ7RTS9 669 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 OPTNQ96CV9 577 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 DISC1Q9NRI5 854 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 UBE4BO95155 1302 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 EVI5O60447 810 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 MUTP22033 750 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 NSFP46459 744 aaKnown RBP8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 VEPH1Q14D04 833 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 RAPH1Q70E73 1250 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 MYLK4Q86YV6 388 aaPredicted RBP8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 LZICQ8WZA0 190 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 ERAP1Q9NZ08 941 aa8.96□□□□□ -0.98
PCDHB1-201ENST00000306549 ARHGAP42A6NI28 874 aa8.95□□□□□ -0.98
PCDHB1-201ENST00000306549 EIF2AK2P19525 551 aaKnown RBP8.95□□□□□ -0.98
PCDHB1-201ENST00000306549 RFC5P40937 340 aa8.95□□□□□ -0.98
PCDHB1-201ENST00000306549 MTMR2Q13614 643 aa8.95□□□□□ -0.98
PCDHB1-201ENST00000306549 PDIA5Q14554 519 aa8.95□□□□□ -0.98
PCDHB1-201ENST00000306549 BAZ2AQ9UIF9 1905 aaKnown RBP8.95□□□□□ -0.98
PCDHB1-201ENST00000306549 PXDNQ92626 1479 aa8.95□□□□□ -0.98
PCDHB1-201ENST00000306549 GNGT2O14610 69 aa8.95□□□□□ -0.98
PCDHB1-201ENST00000306549 KCNA4P22459 653 aa8.95□□□□□ -0.98
PCDHB1-201ENST00000306549 CA4P22748 312 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms