RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 RDM1Q8NG50 284 aa16.92■□□□□ 0.3
UBXN1-202ENST00000301935 MRPS27Q92552 414 aaKnown RBP16.92■□□□□ 0.3
UBXN1-202ENST00000301935 FAM122AQ96E09 287 aa16.92■□□□□ 0.3
UBXN1-202ENST00000301935 CSRNP2Q9H175 543 aa16.92■□□□□ 0.3
UBXN1-202ENST00000301935 EMSYQ7Z589 1322 aa16.92■□□□□ 0.3
UBXN1-202ENST00000301935 COL4A6Q14031 1691 aa16.91■□□□□ 0.3
UBXN1-202ENST00000301935 FAM237AA0A1B0GTK4 181 aa16.91■□□□□ 0.3
UBXN1-202ENST00000301935 UBA7P41226 1012 aa16.91■□□□□ 0.3
UBXN1-202ENST00000301935 KRT79Q5XKE5 535 aa16.91■□□□□ 0.3
UBXN1-202ENST00000301935 ZNF746Q6NUN9 644 aaPredicted RBP16.91■□□□□ 0.3
UBXN1-202ENST00000301935 FAM117BQ6P1L5 589 aa16.91■□□□□ 0.3
UBXN1-202ENST00000301935 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.91■□□□□ 0.3
UBXN1-202ENST00000301935 SERINC5Q86VE9 423 aa16.91■□□□□ 0.3
UBXN1-202ENST00000301935 CLIC6Q96NY7 704 aa16.91■□□□□ 0.3
UBXN1-202ENST00000301935 C16orf70Q9BSU1 422 aa16.91■□□□□ 0.3
UBXN1-202ENST00000301935 CCSER1Q9C0I3 900 aa16.91■□□□□ 0.3
UBXN1-202ENST00000301935 USP25Q9UHP3 1055 aa16.91■□□□□ 0.3
UBXN1-202ENST00000301935 NLRC5Q86WI3 1866 aa16.9■□□□□ 0.3
UBXN1-202ENST00000301935 DOCK5Q9H7D0 1870 aa16.9■□□□□ 0.3
UBXN1-202ENST00000301935 DHX15O43143 795 aaKnown RBP16.9■□□□□ 0.3
UBXN1-202ENST00000301935 KCNA2P16389 499 aa16.9■□□□□ 0.3
UBXN1-202ENST00000301935 MUTP22033 750 aa16.9■□□□□ 0.3
UBXN1-202ENST00000301935 SFNP31947 248 aa16.9■□□□□ 0.3
UBXN1-202ENST00000301935 JAK3P52333 1124 aa16.9■□□□□ 0.3
UBXN1-202ENST00000301935 SP2Q02086 613 aa16.9■□□□□ 0.3
UBXN1-202ENST00000301935 SEMA3FQ13275 785 aa16.9■□□□□ 0.3
UBXN1-202ENST00000301935 IL17AQ16552 155 aa16.9■□□□□ 0.3
UBXN1-202ENST00000301935 HAUS3Q68CZ6 603 aa16.9■□□□□ 0.3
UBXN1-202ENST00000301935 FSIP1Q8NA03 581 aa16.9■□□□□ 0.3
UBXN1-202ENST00000301935 DBF4BQ8NFT6 615 aa16.9■□□□□ 0.3
UBXN1-202ENST00000301935 NEK9Q8TD19 979 aa16.9■□□□□ 0.3
UBXN1-202ENST00000301935 CCDC34Q96HJ3 373 aa16.9■□□□□ 0.3
UBXN1-202ENST00000301935 LRFN3Q9BTN0 628 aa16.9■□□□□ 0.3
UBXN1-202ENST00000301935 UBE2ZQ9H832 354 aaPredicted RBP16.9■□□□□ 0.3
UBXN1-202ENST00000301935 CCDC39Q9UFE4 941 aa16.9■□□□□ 0.3
UBXN1-202ENST00000301935 RALGAPA2Q2PPJ7 1873 aa16.89■□□□□ 0.29
UBXN1-202ENST00000301935 RSPH10B2B2RC85 870 aa16.89■□□□□ 0.29
UBXN1-202ENST00000301935 GADD45BO75293 160 aaPredicted RBP16.89■□□□□ 0.29
UBXN1-202ENST00000301935 AMHP03971 560 aa16.89■□□□□ 0.29
UBXN1-202ENST00000301935 RSPH10BP0C881 870 aa16.89■□□□□ 0.29
UBXN1-202ENST00000301935 HOXC8P31273 242 aa16.89■□□□□ 0.29
UBXN1-202ENST00000301935 THPOP40225 353 aa16.89■□□□□ 0.29
UBXN1-202ENST00000301935 HTRA4P83105 476 aaPredicted RBP16.89■□□□□ 0.29
UBXN1-202ENST00000301935 SPIRE1Q08AE8 756 aa16.89■□□□□ 0.29
UBXN1-202ENST00000301935 EPHA7Q15375 998 aa16.89■□□□□ 0.29
UBXN1-202ENST00000301935 TMEM31Q5JXX7 168 aa16.89■□□□□ 0.29
UBXN1-202ENST00000301935 SHC4Q6S5L8 630 aa16.89■□□□□ 0.29
UBXN1-202ENST00000301935 B3GNT9Q6UX72 402 aa16.89■□□□□ 0.29
UBXN1-202ENST00000301935 SMAP1Q8IYB5 467 aaPredicted RBP16.89■□□□□ 0.29
UBXN1-202ENST00000301935 MYOCDQ8IZQ8 938 aa16.89■□□□□ 0.29
UBXN1-202ENST00000301935 SP7Q8TDD2 431 aaPredicted RBP16.89■□□□□ 0.29
UBXN1-202ENST00000301935 KHSRPQ92945 711 aaKnown RBP eCLIP16.89■□□□□ 0.29
UBXN1-202ENST00000301935 CALML4Q96GE6 196 aa16.89■□□□□ 0.29
UBXN1-202ENST00000301935 ZFP91Q96JP5 570 aaPredicted RBP16.89■□□□□ 0.29
UBXN1-202ENST00000301935 C17orf80Q9BSJ5 609 aa16.89■□□□□ 0.29
UBXN1-202ENST00000301935 VAV3Q9UKW4 847 aa16.89■□□□□ 0.29
UBXN1-202ENST00000301935 INSL6Q9Y581 213 aa16.89■□□□□ 0.29
UBXN1-202ENST00000301935 C17orf102A2RUQ5 167 aa16.88■□□□□ 0.29
UBXN1-202ENST00000301935 WDR64B1ANS9 1081 aa16.88■□□□□ 0.29
UBXN1-202ENST00000301935 LGALS2P05162 132 aa16.88■□□□□ 0.29
UBXN1-202ENST00000301935 FAM160A1Q05DH4 1040 aa16.88■□□□□ 0.29
UBXN1-202ENST00000301935 ITGB3BPQ13352 177 aaPredicted RBP16.88■□□□□ 0.29
UBXN1-202ENST00000301935 PLEKHG4Q58EX7 1191 aa16.88■□□□□ 0.29
UBXN1-202ENST00000301935 FBXO22Q8NEZ5 403 aa16.88■□□□□ 0.29
UBXN1-202ENST00000301935 ATP6V0A1Q93050 837 aa16.88■□□□□ 0.29
UBXN1-202ENST00000301935 POLR3CQ9BUI4 534 aaPredicted RBP16.88■□□□□ 0.29
UBXN1-202ENST00000301935 NT5C3AQ9H0P0 336 aa16.88■□□□□ 0.29
UBXN1-202ENST00000301935 MLXIPQ9HAP2 919 aa16.88■□□□□ 0.29
UBXN1-202ENST00000301935 JPH1Q9HDC5 661 aaPredicted RBP16.88■□□□□ 0.29
UBXN1-202ENST00000301935 SLC9A2Q9UBY0 812 aa16.88■□□□□ 0.29
UBXN1-202ENST00000301935 KCNH3Q9ULD8 1083 aa16.88■□□□□ 0.29
UBXN1-202ENST00000301935 HPSEQ9Y251 543 aa16.88■□□□□ 0.29
UBXN1-202ENST00000301935 HCN4Q9Y3Q4 1203 aa16.88■□□□□ 0.29
UBXN1-202ENST00000301935 KDM3AQ9Y4C1 1321 aa16.88■□□□□ 0.29
UBXN1-202ENST00000301935 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.87■□□□□ 0.29
UBXN1-202ENST00000301935 H3BRB1 525 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 DKC1O60832 514 aaKnown RBP eCLIP16.87■□□□□ 0.29
UBXN1-202ENST00000301935 ATP9AO75110 1047 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 SMIM10L2AP0DMW4 78 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 SMIM10L2BP0DMW5 78 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 SYKP43405 635 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 GRIN1Q05586 938 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 KLHL40Q2TBA0 621 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 HYIQ5T013 277 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 NCAPH2Q6IBW4 605 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 KANK3Q6NY19 840 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 METTL7BQ6UX53 244 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 MIER3Q7Z3K6 550 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 CABP7Q86V35 215 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 SYAP1Q96A49 352 aaPredicted RBP16.87■□□□□ 0.29
UBXN1-202ENST00000301935 CDK5RAP3Q96JB5 506 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 CUEDC2Q9H467 287 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 TUT1Q9H6E5 874 aaKnown RBP16.87■□□□□ 0.29
UBXN1-202ENST00000301935 TUFT1Q9NNX1 390 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 CD320Q9NPF0 282 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 C11orf16Q9NQ32 467 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 ARIH1Q9Y4X5 557 aaPredicted RBP16.87■□□□□ 0.29
UBXN1-202ENST00000301935 BRWD1Q9NSI6 2320 aa16.87■□□□□ 0.29
UBXN1-202ENST00000301935 A0A1B0GVL5 298 aa16.86■□□□□ 0.29
UBXN1-202ENST00000301935 NOP56O00567 594 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms