RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 COG7P83436 770 aa12.78□□□□□ -0.36
ERCC1-202ENST00000300853 EPM2AIP1Q7L775 607 aaPredicted RBP12.78□□□□□ -0.36
ERCC1-202ENST00000300853 PIGOQ8TEQ8 1089 aa12.78□□□□□ -0.36
ERCC1-202ENST00000300853 MTRQ99707 1265 aa12.78□□□□□ -0.36
ERCC1-202ENST00000300853 LZTS2Q9BRK4 669 aa12.78□□□□□ -0.36
ERCC1-202ENST00000300853 ANAPC5Q9UJX4 755 aa12.78□□□□□ -0.36
ERCC1-202ENST00000300853 DNM3Q9UQ16 869 aa12.78□□□□□ -0.36
ERCC1-202ENST00000300853 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.78□□□□□ -0.36
ERCC1-202ENST00000300853 CNTNAP5Q8WYK1 1306 aa12.78□□□□□ -0.36
ERCC1-202ENST00000300853 ARHGAP42A6NI28 874 aa12.78□□□□□ -0.36
ERCC1-202ENST00000300853 COASYQ13057 564 aa12.78□□□□□ -0.36
ERCC1-202ENST00000300853 DHX34Q14147 1143 aaKnown RBP12.78□□□□□ -0.36
ERCC1-202ENST00000300853 MFN1Q8IWA4 741 aa12.78□□□□□ -0.36
ERCC1-202ENST00000300853 INPP4AQ96PE3 977 aaPredicted RBP12.78□□□□□ -0.36
ERCC1-202ENST00000300853 PURBQ96QR8 312 aaKnown RBP12.78□□□□□ -0.36
ERCC1-202ENST00000300853 CENPKQ9BS16 269 aa12.78□□□□□ -0.36
ERCC1-202ENST00000300853 USP40Q9NVE5 1235 aa12.78□□□□□ -0.36
ERCC1-202ENST00000300853 PPP1R9AQ9ULJ8 1098 aa12.78□□□□□ -0.36
ERCC1-202ENST00000300853 A0A0G2JND7 137 aa12.77□□□□□ -0.36
ERCC1-202ENST00000300853 EXOC1LA0A1B0GW35 172 aa12.77□□□□□ -0.36
ERCC1-202ENST00000300853 FOXP2O15409 715 aa12.77□□□□□ -0.36
ERCC1-202ENST00000300853 AHCYL1O43865 530 aa12.77□□□□□ -0.36
ERCC1-202ENST00000300853 BCRP11274 1271 aa12.77□□□□□ -0.36
ERCC1-202ENST00000300853 FLT3P36888 993 aa12.77□□□□□ -0.36
ERCC1-202ENST00000300853 GALCP54803 685 aa12.77□□□□□ -0.36
ERCC1-202ENST00000300853 CASP7P55210 303 aa12.77□□□□□ -0.36
ERCC1-202ENST00000300853 ACTRT1Q8TDG2 376 aa12.77□□□□□ -0.36
ERCC1-202ENST00000300853 CEP63Q96MT8 703 aa12.77□□□□□ -0.36
ERCC1-202ENST00000300853 SEMA4AQ9H3S1 761 aa12.77□□□□□ -0.36
ERCC1-202ENST00000300853 ANKIB1Q9P2G1 1089 aa12.77□□□□□ -0.36
ERCC1-202ENST00000300853 HAO1Q9UJM8 370 aa12.77□□□□□ -0.36
ERCC1-202ENST00000300853 C2CD2Q9Y426 696 aa12.77□□□□□ -0.36
ERCC1-202ENST00000300853 PCDH11XQ9BZA7 1347 aa12.77□□□□□ -0.36
ERCC1-202ENST00000300853 PCDH11YQ9BZA8 1340 aa12.77□□□□□ -0.36
ERCC1-202ENST00000300853 SLIT1O75093 1534 aa12.77□□□□□ -0.36
ERCC1-202ENST00000300853 CCDC189A1A4V9 331 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 EME2A4GXA9 379 aaPredicted RBP12.77□□□□□ -0.37
ERCC1-202ENST00000300853 A8MUI8 341 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 EXOC3O60645 756 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 TOM1O60784 492 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 SPAG7O75391 227 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 SHBGP04278 402 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 LDHCP07864 332 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 KRT16P08779 473 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 CYP2D6P10635 497 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 ESRRAP11474 423 aaPredicted RBP12.77□□□□□ -0.37
ERCC1-202ENST00000300853 CHRNA3P32297 505 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 TROAPQ12815 778 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 SPARCL1Q14515 664 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 NLRP10Q86W26 655 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 COL23A1Q86Y22 540 aaPredicted RBP12.77□□□□□ -0.37
ERCC1-202ENST00000300853 TPCN2Q8NHX9 752 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 SYNGAP1Q96PV0 1343 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 UBTFL6P0CB48 400 aaPredicted RBP12.77□□□□□ -0.37
ERCC1-202ENST00000300853 SLC9A1P19634 815 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 TMED1Q13445 227 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 DIXDC1Q155Q3 683 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 C6orf89Q6UWU4 347 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 RAB3IL1Q8TBN0 382 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 TFCP2L1Q9NZI6 479 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 TRIM33Q9UPN9 1127 aa12.77□□□□□ -0.37
ERCC1-202ENST00000300853 SPATA31D1Q6ZQQ2 1576 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 SNX3O60493 162 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 RFC5P40937 340 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 KCNMA1Q12791 1236 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 MKRN3Q13064 507 aaKnown RBP12.76□□□□□ -0.37
ERCC1-202ENST00000300853 PABPC4Q13310 644 aaKnown RBP eCLIP12.76□□□□□ -0.372e-6■■■□□ 17.8
ERCC1-202ENST00000300853 MYCT1Q8N699 235 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 GRAMD1AQ96CP6 724 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 SLC12A6Q9UHW9 1150 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 NAGPAQ9UK23 515 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 MYH8P13535 1937 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 CACNA1FO60840 1977 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 KDM3AQ9Y4C1 1321 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 IFNB1P01574 187 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 ROR2Q01974 943 aaKnown RBP12.76□□□□□ -0.37
ERCC1-202ENST00000300853 MIIPQ5JXC2 388 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 CENPPQ6IPU0 288 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 MIS18BP1Q6P0N0 1132 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 TMED8Q6PL24 325 aaPredicted RBP12.76□□□□□ -0.37
ERCC1-202ENST00000300853 ST13P4Q8IZP2 240 aaPredicted RBP12.76□□□□□ -0.37
ERCC1-202ENST00000300853 RFFLQ8WZ73 363 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 RILPQ96NA2 401 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 PAGR1Q9BTK6 254 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.76□□□□□ -0.37
ERCC1-202ENST00000300853 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.76□□□□□ -0.37
ERCC1-202ENST00000300853 RGL1Q9NZL6 768 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 DDX25Q9UHL0 483 aaKnown RBP12.76□□□□□ -0.37
ERCC1-202ENST00000300853 PNMA3Q9UL41 463 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 PCDHA6Q9UN73 950 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 USTQ9Y2C2 406 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 SIK3Q9Y2K2 1263 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 DIS3Q9Y2L1 958 aaKnown RBP12.76□□□□□ -0.37
ERCC1-202ENST00000300853 PCDHA8Q9Y5H6 950 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 CFAP69A5D8W1 941 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 USP17L3A6NCW0 530 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 USP17L4A6NCW7 530 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 UCHL3P15374 230 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 CNGA1P29973 690 aa12.76□□□□□ -0.37
ERCC1-202ENST00000300853 KCNJ1P48048 391 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms