RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 JAMLQ86YT9 394 aa11.12□□□□□ -0.63
LMX1A-201ENST00000294816 L3MBTL3Q96JM7 780 aaPredicted RBP11.12□□□□□ -0.63
LMX1A-201ENST00000294816 IFT74Q96LB3 600 aa11.12□□□□□ -0.63
LMX1A-201ENST00000294816 MTRF1LQ9UGC7 380 aaKnown RBP11.12□□□□□ -0.63
LMX1A-201ENST00000294816 PPP1R9AQ9ULJ8 1098 aa11.12□□□□□ -0.63
LMX1A-201ENST00000294816 COL1A1P02452 1464 aaPredicted RBP11.12□□□□□ -0.63
LMX1A-201ENST00000294816 FOXO6A8MYZ6 492 aa11.12□□□□□ -0.63
LMX1A-201ENST00000294816 ERVV-1B6SEH8 477 aa11.12□□□□□ -0.63
LMX1A-201ENST00000294816 PLCG2P16885 1265 aa11.12□□□□□ -0.63
LMX1A-201ENST00000294816 UBE2SQ16763 222 aa11.12□□□□□ -0.63
LMX1A-201ENST00000294816 ZCWPW2Q504Y3 356 aa11.12□□□□□ -0.63
LMX1A-201ENST00000294816 KIAA1755Q5JYT7 1200 aa11.12□□□□□ -0.63
LMX1A-201ENST00000294816 C6orf118Q5T5N4 469 aa11.12□□□□□ -0.63
LMX1A-201ENST00000294816 GLYCTKQ8IVS8 523 aa11.12□□□□□ -0.63
LMX1A-201ENST00000294816 SLC17A8Q8NDX2 589 aa11.12□□□□□ -0.63
LMX1A-201ENST00000294816 RBM46Q8TBY0 533 aaKnown RBP11.12□□□□□ -0.63
LMX1A-201ENST00000294816 ADAM7Q9H2U9 754 aa11.12□□□□□ -0.63
LMX1A-201ENST00000294816 DNAJC17Q9NVM6 304 aaKnown RBP11.12□□□□□ -0.63
LMX1A-201ENST00000294816 BCORQ6W2J9 1755 aa11.12□□□□□ -0.63
LMX1A-201ENST00000294816 SNX3O60493 162 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 AFPP02771 609 aaKnown RBP11.11□□□□□ -0.63
LMX1A-201ENST00000294816 XRCC5P13010 732 aaKnown RBP11.11□□□□□ -0.63
LMX1A-201ENST00000294816 ATP2A2P16615 1042 aaKnown RBP11.11□□□□□ -0.63
LMX1A-201ENST00000294816 CCND1P24385 295 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 PCK1P35558 622 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 COPS2P61201 443 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 RIPK1Q13546 671 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 LONRF1Q17RB8 773 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 THEMIS2Q5TEJ8 643 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 MAPKAPK5Q8IW41 473 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 TGFBRAP1Q8WUH2 860 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 CTNNBL1Q8WYA6 563 aaPredicted RBP11.11□□□□□ -0.63
LMX1A-201ENST00000294816 C18orf8Q96DM3 657 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 PAIP2Q9BPZ3 127 aaKnown RBP11.11□□□□□ -0.63
LMX1A-201ENST00000294816 OSBPL1AQ9BXW6 950 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 RTCBQ9Y3I0 505 aaKnown RBP11.11□□□□□ -0.63
LMX1A-201ENST00000294816 PCDHB13Q9Y5F0 798 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 BZW2Q9Y6E2 419 aaKnown RBP11.11□□□□□ -0.63
LMX1A-201ENST00000294816 TRPM3Q9HCF6 1732 aaPredicted RBP11.11□□□□□ -0.63
LMX1A-201ENST00000294816 PALM3A6NDB9 673 aaPredicted RBP11.11□□□□□ -0.63
LMX1A-201ENST00000294816 DDX3XO00571 662 aaKnown RBP eCLIP11.11□□□□□ -0.63
LMX1A-201ENST00000294816 AP1G2O75843 785 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 ACSL3O95573 720 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 PDHA1P08559 390 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 MSH2P43246 934 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 ADCY2Q08462 1091 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 ZNF268Q14587 947 aaPredicted RBP11.11□□□□□ -0.63
LMX1A-201ENST00000294816 GNPTABQ3T906 1256 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 ANKRD20A2Q5SQ80 823 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 ANKRD20A1Q5TYW2 823 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 ANKRD20A3Q5VUR7 823 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 BARGINQ6ZT62 677 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 TAOK1Q7L7X3 1001 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 SLC35G2Q8TBE7 412 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 RNF217Q8TC41 542 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 DNAJC19Q96DA6 116 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 ARHGEF10LQ9HCE6 1279 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 AJAP1Q9UKB5 411 aaPredicted RBP11.11□□□□□ -0.63
LMX1A-201ENST00000294816 CICQ96RK0 1608 aaPredicted RBP11.11□□□□□ -0.63
LMX1A-201ENST00000294816 AGTP01019 485 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 ADCY7P51828 1080 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 UBE4AQ14139 1066 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 ARHGAP27Q6ZUM4 889 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 SCFD1Q8WVM8 642 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 PGM2Q96G03 612 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 HOMER3Q9NSC5 361 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 GCNT4Q9P109 453 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 ZNF804BA4D1E1 1349 aa11.11□□□□□ -0.63
LMX1A-201ENST00000294816 DOCK2Q92608 1830 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 POTEB3A0JP26 581 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 POTECB2RU33 542 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 CLIC2O15247 247 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 PLA2G4BP0C869 781 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 CREB1P16220 341 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 PON1P27169 355 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 IL6STP40189 918 aaPredicted RBP11.1□□□□□ -0.63
LMX1A-201ENST00000294816 PTENP60484 403 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 CNGA2Q16280 664 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 C12orf60Q5U649 245 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 MIS18BP1Q6P0N0 1132 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 POTEBQ6S5H4 581 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 RASGEF1CQ8N431 466 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 MTMR9Q96QG7 549 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 SH3GL3Q99963 347 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 STMN4Q9H169 189 aaPredicted RBP11.1□□□□□ -0.63
LMX1A-201ENST00000294816 EPB41L4BQ9H329 900 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 MYH3P11055 1940 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 HIP1RO75146 1068 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 SMNDC1O75940 238 aaKnown RBP eCLIP11.1□□□□□ -0.63
LMX1A-201ENST00000294816 FXR2P51116 673 aaKnown RBP eCLIP11.1□□□□□ -0.63
LMX1A-201ENST00000294816 EIF6P56537 245 aaKnown RBP11.1□□□□□ -0.63
LMX1A-201ENST00000294816 DUPD1Q68J44 220 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 SH3RF3Q8TEJ3 882 aaPredicted RBP11.1□□□□□ -0.63
LMX1A-201ENST00000294816 GPCPD1Q9NPB8 672 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 SLC5A4Q9NY91 659 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 PCDHA12Q9UN75 941 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 TMEM120BA0PK00 339 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 BTNL10A8MVZ5 291 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 H0Y3Z8 333 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 RAD21O60216 631 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms