RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 MTRQ99707 1265 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 JPH2Q9BR39 696 aaPredicted RBP7.29□□□□□ -1.24
CD44-204ENST00000279452 ZBED2Q9BTP6 218 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 NIFKQ9BYG3 293 aaKnown RBP7.29□□□□□ -1.24
CD44-204ENST00000279452 CELF4Q9BZC1 486 aaKnown RBP7.29□□□□□ -1.24
CD44-204ENST00000279452 PRO3102Q9H379 93 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 ATP6V0A4Q9HBG4 840 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 TUFT1Q9NNX1 390 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 CLIC4Q9Y696 253 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 STK24Q9Y6E0 443 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 TANC1Q9C0D5 1861 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 KDM3AQ9Y4C1 1321 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 GRXCR1A8MXD5 290 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 MAFO75444 373 aaPredicted RBP7.28□□□□□ -1.24
CD44-204ENST00000279452 RPS6KA5O75582 802 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 BAIAP3O94812 1187 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 AMHP03971 560 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 SPATA31C1P0DKV0 1188 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 PDIA4P13667 645 aaKnown RBP7.28□□□□□ -1.24
CD44-204ENST00000279452 ATP2A2P16615 1042 aaKnown RBP7.28□□□□□ -1.24
CD44-204ENST00000279452 RPA1P27694 616 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 CD52P31358 61 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 TXLNAP40222 546 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 UBA7P41226 1012 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 MGAT3Q09327 533 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 DRP2Q13474 957 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 PKP1Q13835 747 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 LPIN1Q14693 890 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 IL17AQ16552 155 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 TPRNQ4KMQ1 711 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 FBXO47Q5MNV8 452 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 FAM102BQ5T8I3 360 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 ARL6IP4Q66PJ3 421 aaKnown RBP7.28□□□□□ -1.24
CD44-204ENST00000279452 TRAF7Q6Q0C0 670 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 TSHZ1Q6ZSZ6 1077 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 CABP7Q86V35 215 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 EXOC8Q8IYI6 725 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 KIAA0319LQ8IZA0 1049 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 MYOCDQ8IZQ8 938 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 NME8Q8N427 588 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 C4orf32Q8N8J7 132 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 IGSF22Q8N9C0 903 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 ZNF579Q8NAF0 562 aaKnown RBP7.28□□□□□ -1.24
CD44-204ENST00000279452 TCP11Q8WWU5 503 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 PSPC1Q8WXF1 523 aaKnown RBP7.28□□□□□ -1.24
CD44-204ENST00000279452 HERVK_113Q902F9 699 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 APBB2Q92870 758 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 TMEM143Q96AN5 459 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 CALML4Q96GE6 196 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 LRCH3Q96II8 777 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 NACC1Q96RE7 527 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 USP28Q96RU2 1077 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 HSD17B14Q9BPX1 270 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 POLR3CQ9BUI4 534 aaPredicted RBP7.28□□□□□ -1.24
CD44-204ENST00000279452 OSBPL7Q9BZF2 842 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 BHMT2Q9H2M3 363 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 ANKEF1Q9NU02 776 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 DDX19AQ9NUU7 478 aaKnown RBP7.28□□□□□ -1.24
CD44-204ENST00000279452 CXXC1Q9P0U4 656 aaPredicted RBP7.28□□□□□ -1.24
CD44-204ENST00000279452 SUCLA2Q9P2R7 463 aaPredicted RBP7.28□□□□□ -1.24
CD44-204ENST00000279452 KIAA1024Q9UPX6 916 aa7.28□□□□□ -1.24
CD44-204ENST00000279452 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.27□□□□□ -1.25
CD44-204ENST00000279452 ABHD14A-ACY1A0A1B0GW23 586 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.27□□□□□ -1.25
CD44-204ENST00000279452 DENND3A2RUS2 1198 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 E9PMD0 336 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 SOX1O00570 391 aaPredicted RBP7.27□□□□□ -1.25
CD44-204ENST00000279452 EFCAB14O75071 495 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 DGAT1O75907 488 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 UPP2O95045 317 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 STBD1O95210 358 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 LYPLA2O95372 231 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 CXCL10P02778 98 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 SRGAP2CP0DJJ0 459 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 LIG1P18858 919 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 FGFR4P22455 802 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 RARRES1P49788 294 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 GPC3P51654 580 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 RABGGTBP53611 331 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 CRYBB1P53674 252 aaPredicted RBP7.27□□□□□ -1.25
CD44-204ENST00000279452 WDR5P61964 334 aaKnown RBP7.27□□□□□ -1.25
CD44-204ENST00000279452 DEFB103AP81534 67 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 TFDP1Q14186 410 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 PDIA5Q14554 519 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 DHX8Q14562 1220 aaKnown RBP7.27□□□□□ -1.25
CD44-204ENST00000279452 TARBP2Q15633 366 aaKnown RBP7.27□□□□□ -1.25
CD44-204ENST00000279452 TMEM132AQ24JP5 1023 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 PLEKHG4Q58EX7 1191 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 FAM26DQ5JW98 314 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 SPECC1Q5M775 1068 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 ODR4Q5SWX8 454 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 FAM109BQ6ICB4 259 aaPredicted RBP7.27□□□□□ -1.25
CD44-204ENST00000279452 TMCO2Q7Z6W1 182 aaPredicted RBP7.27□□□□□ -1.25
CD44-204ENST00000279452 RPAINQ86UA6 219 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 KSR1Q8IVT5 923 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 USP38Q8NB14 1042 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 AK8Q96MA6 479 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 FAM161BQ96MY7 647 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 SLC9A7Q96T83 725 aa7.27□□□□□ -1.25
CD44-204ENST00000279452 GCOM2Q9BZD3 368 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms