RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 DMGDHQ9UI17 866 aaKnown RBP14.15□□□□□ -0.14
C9orf3-201ENST00000277198 SALL4Q9UJQ4 1053 aa14.15□□□□□ -0.14
C9orf3-201ENST00000277198 KIAA1024Q9UPX6 916 aa14.15□□□□□ -0.14
C9orf3-201ENST00000277198 TRAF3IP3Q9Y228 551 aa14.15□□□□□ -0.14
C9orf3-201ENST00000277198 AFG3L2Q9Y4W6 797 aa14.15□□□□□ -0.14
C9orf3-201ENST00000277198 BRCA2P51587 3418 aa14.15□□□□□ -0.14
C9orf3-201ENST00000277198 ECM2O94769 699 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-201ENST00000277198 CAP2P40123 477 aa14.14□□□□□ -0.15
C9orf3-201ENST00000277198 POLR2FP61218 127 aaKnown RBP14.14□□□□□ -0.15
C9orf3-201ENST00000277198 ADAM9Q13443 819 aa14.14□□□□□ -0.15
C9orf3-201ENST00000277198 TAF1CQ15572 869 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-201ENST00000277198 SND1Q7KZF4 910 aaKnown RBP eCLIP14.14□□□□□ -0.15
C9orf3-201ENST00000277198 GLIS3Q8NEA6 775 aa14.14□□□□□ -0.15
C9orf3-201ENST00000277198 ERMNQ8TAM6 284 aa14.14□□□□□ -0.15
C9orf3-201ENST00000277198 ABHD8Q96I13 439 aa14.14□□□□□ -0.15
C9orf3-201ENST00000277198 LSM14BQ9BX40 385 aaKnown RBP14.14□□□□□ -0.15
C9orf3-201ENST00000277198 FEZ2Q9UHY8 353 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-201ENST00000277198 RRP15Q9Y3B9 282 aaKnown RBP14.14□□□□□ -0.15
C9orf3-201ENST00000277198 PHIPQ8WWQ0 1821 aa14.14□□□□□ -0.15
C9orf3-201ENST00000277198 USP17L10C9JJH3 530 aa14.14□□□□□ -0.15
C9orf3-201ENST00000277198 ALDH1A1P00352 501 aa14.14□□□□□ -0.15
C9orf3-201ENST00000277198 SLC12A3P55017 1021 aa14.14□□□□□ -0.15
C9orf3-201ENST00000277198 IFI16Q16666 785 aaKnown RBP14.14□□□□□ -0.15
C9orf3-201ENST00000277198 TTBK2Q6IQ55 1244 aa14.14□□□□□ -0.15
C9orf3-201ENST00000277198 GPAT2Q6NUI2 795 aa14.14□□□□□ -0.15
C9orf3-201ENST00000277198 GPBP1Q86WP2 473 aa14.14□□□□□ -0.15
C9orf3-201ENST00000277198 DRC1Q96MC2 740 aa14.14□□□□□ -0.15
C9orf3-201ENST00000277198 NLRC4Q9NPP4 1024 aa14.14□□□□□ -0.15
C9orf3-201ENST00000277198 GDF3Q9NR23 364 aa14.14□□□□□ -0.15
C9orf3-201ENST00000277198 NYAP2Q9P242 653 aa14.14□□□□□ -0.15
C9orf3-201ENST00000277198 HERC5Q9UII4 1024 aaKnown RBP14.14□□□□□ -0.15
C9orf3-201ENST00000277198 FBXL5Q9UKA1 691 aa14.14□□□□□ -0.15
C9orf3-201ENST00000277198 E9PMD0 336 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 FOSP01100 380 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-201ENST00000277198 NAP1L1P55209 391 aaKnown RBP14.13□□□□□ -0.15
C9orf3-201ENST00000277198 KLHL30Q0D2K2 578 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 Q4G0T1 1027 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 MEI1Q5TIA1 1274 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 HDAC7Q8WUI4 952 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 CRYGNQ8WXF5 182 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 ANO3Q9BYT9 981 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 FAM107BQ9H098 131 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 GANQ9H2C0 597 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 RASSF4Q9H2L5 321 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 A0A0G2JLL6 359 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-201ENST00000277198 PDXKO00764 312 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 HSF2BPO75031 334 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 SSBP05455 408 aaKnown RBP eCLIP14.13□□□□□ -0.15
C9orf3-201ENST00000277198 SPP2Q13103 211 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 ASIC2Q16515 512 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 PRRT2Q7Z6L0 340 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-201ENST00000277198 MREGQ8N565 214 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 C1orf131Q8NDD1 294 aaKnown RBP14.13□□□□□ -0.15
C9orf3-201ENST00000277198 CD99L2Q8TCZ2 262 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 TBC1D5Q92609 795 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 FAM20AQ96MK3 541 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 KANSL2Q9H9L4 492 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 METTL14Q9HCE5 456 aaKnown RBP14.13□□□□□ -0.15
C9orf3-201ENST00000277198 RBM12Q9NTZ6 932 aaKnown RBP14.13□□□□□ -0.15
C9orf3-201ENST00000277198 PCDHA1Q9Y5I3 950 aa14.13□□□□□ -0.15
C9orf3-201ENST00000277198 PDHXO00330 501 aa14.12□□□□□ -0.15
C9orf3-201ENST00000277198 BUB1O43683 1085 aa14.12□□□□□ -0.15
C9orf3-201ENST00000277198 FKTNO75072 461 aa14.12□□□□□ -0.15
C9orf3-201ENST00000277198 PALMO75781 387 aa14.12□□□□□ -0.15
C9orf3-201ENST00000277198 KRT18P05783 430 aaKnown RBP14.12□□□□□ -0.15
C9orf3-201ENST00000277198 CYP2C8P10632 490 aa14.12□□□□□ -0.15
C9orf3-201ENST00000277198 RPA1P27694 616 aa14.12□□□□□ -0.15
C9orf3-201ENST00000277198 ATP2B2Q01814 1243 aa14.12□□□□□ -0.15
C9orf3-201ENST00000277198 KCNH2Q12809 1159 aa14.12□□□□□ -0.15
C9orf3-201ENST00000277198 PAK2Q13177 524 aa14.12□□□□□ -0.15
C9orf3-201ENST00000277198 BMT2Q1RMZ1 405 aa14.12□□□□□ -0.15
C9orf3-201ENST00000277198 KIAA0753Q2KHM9 967 aa14.12□□□□□ -0.15
C9orf3-201ENST00000277198 QRICH1Q2TAL8 776 aa14.12□□□□□ -0.15
C9orf3-201ENST00000277198 GADL1Q6ZQY3 521 aa14.12□□□□□ -0.15
C9orf3-201ENST00000277198 GSPT2Q8IYD1 628 aaKnown RBP14.12□□□□□ -0.15
C9orf3-201ENST00000277198 SYT2Q8N9I0 419 aaPredicted RBP14.12□□□□□ -0.15
C9orf3-201ENST00000277198 RUFY1Q96T51 708 aa14.12□□□□□ -0.15
C9orf3-201ENST00000277198 DNM3Q9UQ16 869 aa14.12□□□□□ -0.15
C9orf3-201ENST00000277198 ATAD5Q96QE3 1844 aa14.11□□□□□ -0.15
C9orf3-201ENST00000277198 POTEB3A0JP26 581 aa14.11□□□□□ -0.15
C9orf3-201ENST00000277198 CALUO43852 315 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-201ENST00000277198 NR2F2P24468 414 aa14.11□□□□□ -0.15
C9orf3-201ENST00000277198 KLRC1P26715 233 aa14.11□□□□□ -0.15
C9orf3-201ENST00000277198 CXCR5P32302 372 aa14.11□□□□□ -0.15
C9orf3-201ENST00000277198 SLC16A2P36021 539 aa14.11□□□□□ -0.15
C9orf3-201ENST00000277198 SPIRE1Q08AE8 756 aa14.11□□□□□ -0.15
C9orf3-201ENST00000277198 KNOP1Q1ED39 458 aaKnown RBP14.11□□□□□ -0.15
C9orf3-201ENST00000277198 ARSHQ5FYA8 562 aa14.11□□□□□ -0.15
C9orf3-201ENST00000277198 TREML2Q5T2D2 321 aa14.11□□□□□ -0.15
C9orf3-201ENST00000277198 POTEBQ6S5H4 581 aa14.11□□□□□ -0.15
C9orf3-201ENST00000277198 KCTD1Q719H9 257 aa14.11□□□□□ -0.15
C9orf3-201ENST00000277198 EPM2AIP1Q7L775 607 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-201ENST00000277198 ANKRD13CQ8N6S4 541 aa14.11□□□□□ -0.15
C9orf3-201ENST00000277198 ETNPPLQ8TBG4 499 aa14.11□□□□□ -0.15
C9orf3-201ENST00000277198 RIN2Q8WYP3 895 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-201ENST00000277198 GDAP1L1Q96MZ0 367 aa14.11□□□□□ -0.15
C9orf3-201ENST00000277198 TRIM34Q9BYJ4 488 aa14.11□□□□□ -0.15
C9orf3-201ENST00000277198 ARMCX3Q9UH62 379 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-201ENST00000277198 GREB1LQ9C091 1923 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-201ENST00000277198 ZSWIM8A7E2V4 1837 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms