RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 SRGNP10124 158 aa14.8□□□□□ -0.04
HCFC2-201ENST00000229330 CDC37Q16543 378 aaPredicted RBP14.8□□□□□ -0.04
HCFC2-201ENST00000229330 RSBN1LQ6PCB5 846 aaPredicted RBP14.8□□□□□ -0.04
HCFC2-201ENST00000229330 SH3GLB2Q9NR46 395 aa14.8□□□□□ -0.04
HCFC2-201ENST00000229330 NEDD4P46934 1319 aa14.8□□□□□ -0.04
HCFC2-201ENST00000229330 COPEO14579 308 aa14.8□□□□□ -0.04
HCFC2-201ENST00000229330 TRAPPC11Q7Z392 1133 aa14.8□□□□□ -0.04
HCFC2-201ENST00000229330 TEKT4Q8WW24 435 aa14.8□□□□□ -0.04
HCFC2-201ENST00000229330 PIH1D3Q9NQM4 214 aaKnown RBP14.8□□□□□ -0.04
HCFC2-201ENST00000229330 SEC31BQ9NQW1 1179 aa14.8□□□□□ -0.04
HCFC2-201ENST00000229330 SMARCAL1Q9NZC9 954 aa14.8□□□□□ -0.04
HCFC2-201ENST00000229330 DLGAP2Q9P1A6 1054 aa14.8□□□□□ -0.04
HCFC2-201ENST00000229330 TRPC5Q9UL62 973 aaPredicted RBP14.8□□□□□ -0.04
HCFC2-201ENST00000229330 SCTRP47872 440 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 RNF34Q969K3 372 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 STRBPQ96SI9 672 aaKnown RBP14.79□□□□□ -0.04
HCFC2-201ENST00000229330 ZNF446Q9NWS9 450 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 SETBP1Q9Y6X0 1596 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 MCF2LO15068 1137 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 ANP32DO95626 131 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 PCYT1AP49585 367 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 DNAJC12Q9UKB3 198 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 MCF2P10911 925 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 SAT1P21673 171 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 FGFR4P22455 802 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 CCDC137Q6PK04 289 aaKnown RBP14.79□□□□□ -0.04
HCFC2-201ENST00000229330 APOBEC2Q9Y235 224 aaKnown RBP14.79□□□□□ -0.04
HCFC2-201ENST00000229330 ZNF804BA4D1E1 1349 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 LIG4P49917 911 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 KCNQ4P56696 695 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 AFG3L2Q9Y4W6 797 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 NCAPD2Q15021 1401 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 ATP10DQ9P241 1426 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 TULP4Q9NRJ4 1543 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 hCG_1984214I3L0E3 225 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 DNAJC6O75061 913 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 PGM1P36871 562 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 KCNH2Q12809 1159 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 FAM182BQ5T319 152 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 PPP1R2P3Q6NXS1 205 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 RASSF3Q86WH2 238 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 ZNF713Q8N859 430 aaPredicted RBP14.79□□□□□ -0.04
HCFC2-201ENST00000229330 ATP6V0A4Q9HBG4 840 aa14.79□□□□□ -0.04
HCFC2-201ENST00000229330 MROH7-TTC4A0A0A0MT08 1334 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 PPIP5K2O43314 1243 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 RAD51CO43502 376 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 KRT37O76014 449 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 PRPF6O94906 941 aaKnown RBP14.78□□□□□ -0.04
HCFC2-201ENST00000229330 RCAN1P53805 252 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 EPHB1P54762 984 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 GPC5P78333 572 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 DPYDQ12882 1025 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 KCNB1Q14721 858 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 FLAD1Q8NFF5 587 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 DTX3LQ8TDB6 740 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 AGPAT5Q9NUQ2 364 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 TTI1O43156 1089 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 GSTA1P08263 222 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 GSTA2P09210 222 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 STX1BP61266 288 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 DYNLT1P63172 113 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 FOXR1Q6PIV2 292 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 ARL8AQ96BM9 186 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 ISCUQ9H1K1 167 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 QTRT2Q9H974 415 aaKnown RBP14.78□□□□□ -0.04
HCFC2-201ENST00000229330 PCDHB4Q9Y5E5 795 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 PITPNM2Q9BZ72 1349 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 ZRANB2O95218 330 aaKnown RBP eCLIP14.78□□□□□ -0.04
HCFC2-201ENST00000229330 SERPINB4P48594 390 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 IL25Q9H293 177 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 ERVV-1B6SEH8 477 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 PIK3CAP42336 1068 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 RFX8Q6ZV50 586 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 CFAP36Q96G28 342 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 MOV10L1Q9BXT6 1211 aaKnown RBP14.78□□□□□ -0.04
HCFC2-201ENST00000229330 PICK1Q9NRD5 415 aa14.78□□□□□ -0.04
HCFC2-201ENST00000229330 G3BP2Q9UN86 482 aaKnown RBP14.78□□□□□ -0.04
HCFC2-201ENST00000229330 FOSP01100 380 aaPredicted RBP14.77□□□□□ -0.04
HCFC2-201ENST00000229330 ECE1P42892 770 aa14.77□□□□□ -0.04
HCFC2-201ENST00000229330 COPS2P61201 443 aa14.77□□□□□ -0.04
HCFC2-201ENST00000229330 DYNLL1P63167 89 aaKnown RBP14.77□□□□□ -0.04
HCFC2-201ENST00000229330 KIAA1755Q5JYT7 1200 aa14.77□□□□□ -0.04
HCFC2-201ENST00000229330 TRIM50Q86XT4 487 aa14.77□□□□□ -0.04
HCFC2-201ENST00000229330 FAM81BQ96LP2 452 aa14.77□□□□□ -0.04
HCFC2-201ENST00000229330 TEKT3Q9BXF9 490 aa14.77□□□□□ -0.04
HCFC2-201ENST00000229330 RAB21Q9UL25 225 aa14.77□□□□□ -0.04
HCFC2-201ENST00000229330 SNUPNO95149 360 aaKnown RBP14.77□□□□□ -0.04
HCFC2-201ENST00000229330 GGPS1O95749 300 aa14.77□□□□□ -0.04
HCFC2-201ENST00000229330 ARL4CP56559 192 aa14.77□□□□□ -0.04
HCFC2-201ENST00000229330 FAM196AQ6ZSG2 479 aa14.77□□□□□ -0.04
HCFC2-201ENST00000229330 TMC4Q7Z404 712 aa14.77□□□□□ -0.04
HCFC2-201ENST00000229330 SESTD1Q86VW0 696 aa14.77□□□□□ -0.04
HCFC2-201ENST00000229330 CCDC125Q86Z20 511 aa14.77□□□□□ -0.04
HCFC2-201ENST00000229330 PIGSQ96S52 555 aa14.77□□□□□ -0.04
HCFC2-201ENST00000229330 SSU72P8A0A1W2PR75 194 aa14.77□□□□□ -0.05
HCFC2-201ENST00000229330 STAT2P52630 851 aa14.77□□□□□ -0.05
HCFC2-201ENST00000229330 ATP2C1P98194 919 aaPredicted RBP14.77□□□□□ -0.05
HCFC2-201ENST00000229330 OCA2Q04671 838 aa14.77□□□□□ -0.05
HCFC2-201ENST00000229330 MED21Q13503 144 aa14.77□□□□□ -0.05
HCFC2-201ENST00000229330 KLHL38Q2WGJ6 581 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms