RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 KCND2Q9NZV8 630 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 SEL1LQ9UBV2 794 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 DOCK1Q14185 1865 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 ASTN1O14525 1302 aa24.27■■□□□ 1.48
CCDC9-201ENST00000221922 UBE4BO95155 1302 aa24.27■■□□□ 1.48
CCDC9-201ENST00000221922 UBXN2AP68543 259 aa24.27■■□□□ 1.48
CCDC9-201ENST00000221922 ASIC2Q16515 512 aa24.27■■□□□ 1.48
CCDC9-201ENST00000221922 C1orf186Q6ZWK4 172 aa24.27■■□□□ 1.48
CCDC9-201ENST00000221922 NACC1Q96RE7 527 aa24.27■■□□□ 1.48
CCDC9-201ENST00000221922 PSMB7Q99436 277 aa24.27■■□□□ 1.48
CCDC9-201ENST00000221922 SMARCAL1Q9NZC9 954 aa24.27■■□□□ 1.48
CCDC9-201ENST00000221922 FZD9O00144 591 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 CHMP2AO43633 222 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 BUB1O43683 1085 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 SLC18A3Q16572 532 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 NFIL3Q16649 462 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 CFAP221Q4G0U5 840 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 MCF2L2Q86YR7 1114 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 PIGOQ8TEQ8 1089 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 CLEC4DQ8WXI8 215 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 CAVIN3Q969G5 261 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 HOOK2Q96ED9 719 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 ZNF577Q9BSK1 485 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 TEKT3Q9BXF9 490 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 RBM12Q9NTZ6 932 aaKnown RBP24.26■■□□□ 1.47
CCDC9-201ENST00000221922 EHD2Q9NZN4 543 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 BCS1LQ9Y276 419 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 FRMPD4Q14CM0 1322 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 MATR3P43243 847 aaKnown RBP eCLIP24.26■■□□□ 1.471e-7■□□□□ 9.2
CCDC9-201ENST00000221922 SLC7A5Q01650 507 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 EPHA7Q15375 998 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 B3GNT9Q6UX72 402 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 STXBP4Q6ZWJ1 553 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 FAM76AQ8TAV0 307 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 HINFPQ9BQA5 517 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 MXRA8Q9BRK3 442 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 PARVGQ9HBI0 331 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 SLC38A10Q9HBR0 1119 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 TMEM51Q9NW97 253 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 HACL1Q9UJ83 578 aa24.26■■□□□ 1.47
CCDC9-201ENST00000221922 MYH11P35749 1972 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 BCRP11274 1271 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 KLHL30Q0D2K2 578 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 EXOC3L4Q17RC7 722 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 SAMD7Q7Z3H4 446 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 SAMD3Q8N6K7 520 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 RIT2Q99578 217 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 PPP1R1BQ9UD71 204 aaPredicted RBP24.25■■□□□ 1.47
CCDC9-201ENST00000221922 CNOT7Q9UIV1 285 aaKnown RBP24.25■■□□□ 1.47
CCDC9-201ENST00000221922 PCDHGC5Q9Y5F6 944 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 GOLGA6CA6NDK9 693 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 PPFIA4O75335 1185 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 AKAP3O75969 853 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 GOLGA6DP0CG33 693 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 ARP10275 920 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 C8orf74Q6P047 294 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.25■■□□□ 1.47
CCDC9-201ENST00000221922 NIPA1Q7RTP0 329 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 MYCT1Q8N699 235 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 NEK9Q8TD19 979 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 GOLGA6AQ9NYA3 693 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 MAP3K20Q9NYL2 800 aaKnown RBP24.25■■□□□ 1.47
CCDC9-201ENST00000221922 PNMA2Q9UL42 364 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 ODF2LQ9ULJ1 636 aa24.25■■□□□ 1.47
CCDC9-201ENST00000221922 BZW2Q9Y6E2 419 aaKnown RBP24.25■■□□□ 1.47
CCDC9-201ENST00000221922 ASTN2O75129 1339 aaPredicted RBP24.24■■□□□ 1.47
CCDC9-201ENST00000221922 NNTQ13423 1086 aa24.24■■□□□ 1.47
CCDC9-201ENST00000221922 TBC1D10BQ4KMP7 808 aaPredicted RBP24.24■■□□□ 1.47
CCDC9-201ENST00000221922 ALS2CLQ60I27 953 aa24.24■■□□□ 1.47
CCDC9-201ENST00000221922 FBXL5Q9UKA1 691 aa24.24■■□□□ 1.47
CCDC9-201ENST00000221922 IPO5O00410 1097 aaKnown RBP24.23■■□□□ 1.47
CCDC9-201ENST00000221922 NFIBO00712 420 aa24.23■■□□□ 1.47
CCDC9-201ENST00000221922 PPP1R12BO60237 982 aaPredicted RBP24.23■■□□□ 1.47
CCDC9-201ENST00000221922 PALMO75781 387 aa24.23■■□□□ 1.47
CCDC9-201ENST00000221922 NAP1L1P55209 391 aaKnown RBP24.23■■□□□ 1.47
CCDC9-201ENST00000221922 C10orf76Q5T2E6 689 aa24.23■■□□□ 1.47
CCDC9-201ENST00000221922 FAM133AQ8N9E0 248 aa24.23■■□□□ 1.47
CCDC9-201ENST00000221922 UNC45AQ9H3U1 944 aa24.23■■□□□ 1.47
CCDC9-201ENST00000221922 COL20A1Q9P218 1284 aa24.23■■□□□ 1.47
CCDC9-201ENST00000221922 PARP14Q460N5 1801 aa24.23■■□□□ 1.47
CCDC9-201ENST00000221922 GTPBP10A4D1E9 387 aaKnown RBP24.23■■□□□ 1.47
CCDC9-201ENST00000221922 GRID2IPA4D2P6 1211 aa24.23■■□□□ 1.47
CCDC9-201ENST00000221922 GOLGA8KD6RF30 607 aa24.23■■□□□ 1.47
CCDC9-201ENST00000221922 ZNF131P52739 623 aa24.23■■□□□ 1.47
CCDC9-201ENST00000221922 DCAF17Q5H9S7 520 aaPredicted RBP24.23■■□□□ 1.47
CCDC9-201ENST00000221922 DCAF15Q66K64 600 aa24.23■■□□□ 1.47
CCDC9-201ENST00000221922 GBP6Q6ZN66 633 aa24.23■■□□□ 1.47
CCDC9-201ENST00000221922 MS4A14Q96JA4 679 aa24.23■■□□□ 1.47
CCDC9-201ENST00000221922 SPAG5Q96R06 1193 aa24.23■■□□□ 1.47
CCDC9-201ENST00000221922 SGIP1Q9BQI5 828 aa24.23■■□□□ 1.47
CCDC9-201ENST00000221922 PPP1R9AQ9ULJ8 1098 aa24.23■■□□□ 1.47
CCDC9-201ENST00000221922 GJA3Q9Y6H8 435 aa24.23■■□□□ 1.47
CCDC9-201ENST00000221922 OPA1O60313 960 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 UCHL3P15374 230 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 VCAM1P19320 739 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 KLRC1P26715 233 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 PON1P27169 355 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 MRPS25P82663 173 aaKnown RBP24.22■■□□□ 1.47
CCDC9-201ENST00000221922 MEI1Q5TIA1 1274 aa24.22■■□□□ 1.47
CCDC9-201ENST00000221922 SLC30A10Q6XR72 485 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms