RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 TTC39CQ8N584 583 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 KCTD6Q8NC69 237 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 LMCD1Q9NZU5 365 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 EPHB1P54762 984 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 KNOP1Q1ED39 458 aaKnown RBP11.95□□□□□ -0.5
RGPD5-201ENST00000016946 ARHGEF18Q6ZSZ5 1173 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 CCDC170Q8IYT3 715 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.95□□□□□ -0.5
RGPD5-201ENST00000016946 ANKRD42Q8N9B4 389 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 DNAAF3Q8N9W5 541 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 RNF149Q8NC42 400 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 NUDT12Q9BQG2 462 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 CEP152O94986 1710 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 ZNF18P17022 549 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 SAT1P21673 171 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 GARSP41250 739 aaKnown RBP11.95□□□□□ -0.5
RGPD5-201ENST00000016946 ANKRD20A3Q5VUR7 823 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 HAUS6Q7Z4H7 955 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 ADARB2Q9NS39 739 aaKnown RBP11.95□□□□□ -0.5
RGPD5-201ENST00000016946 HOMER3Q9NSC5 361 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 BNIP3LO60238 219 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 DGAT1O75907 488 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 DYNLT1P63172 113 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 PDE1BQ01064 536 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 PHLDB2Q86SQ0 1253 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 SMARCAD1Q9H4L7 1026 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 EFCAB8A8MWE9 144 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 HSPA6P17066 643 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 EXOSC10Q01780 885 aaKnown RBP11.94□□□□□ -0.5
RGPD5-201ENST00000016946 TSTA3Q13630 321 aaPredicted RBP11.94□□□□□ -0.5
RGPD5-201ENST00000016946 SGO2Q562F6 1265 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.94□□□□□ -0.5
RGPD5-201ENST00000016946 ATG4CQ96DT6 458 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 DONSONQ9NYP3 566 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 CDC42BPBQ9Y5S2 1711 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 UBE2Q2LH0YL09 131 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 EYA4O95677 639 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 NFKBIAP25963 317 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 CDC25BP30305 580 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 VSTM4Q8IW00 320 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 ADAMTS1Q9UHI8 967 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 PFASO15067 1338 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 PPP4CP60510 307 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 PTPN21Q16825 1174 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 ADAM22Q9P0K1 906 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 PIK3C2BO00750 1634 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 ECE1P42892 770 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 KCNJ6P48051 423 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 GTF2A2P52657 109 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 PDIA5Q14554 519 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 BRD3Q15059 726 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 NCAPGQ9BPX3 1015 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 KDM4FA0A1W2PPD8 638 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 PP2D1A8MPX8 630 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 PGRMC1O00264 195 aaKnown RBP11.94□□□□□ -0.5
RGPD5-201ENST00000016946 GOLGA8FQ08AF8 430 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 GOLGA8DPQ0D2H9 430 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 RPS6KA2Q15349 733 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 KYAT1Q16773 422 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 CEP85LQ5SZL2 805 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 TMEM270Q6UE05 265 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 TOGARAM2Q6ZUX3 1019 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 SCFD2Q8WU76 684 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 ZNF560Q96MR9 790 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 TTC1Q99614 292 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 CACYBPQ9HB71 228 aaKnown RBP11.94□□□□□ -0.5
RGPD5-201ENST00000016946 TUFT1Q9NNX1 390 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 POLLQ9UGP5 575 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 TACC3Q9Y6A5 838 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 HEXIM1O94992 359 aaKnown RBP11.94□□□□□ -0.5
RGPD5-201ENST00000016946 OGFRQ9NZT2 677 aa11.94□□□□□ -0.5
RGPD5-201ENST00000016946 MMP14P50281 582 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 KRT39Q6A163 491 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 DARS2Q6PI48 645 aaKnown RBP11.93□□□□□ -0.5
RGPD5-201ENST00000016946 RHOT2Q8IXI1 618 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 STMN2Q93045 179 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 EPB41L4AQ9HCS5 686 aaPredicted RBP11.93□□□□□ -0.5
RGPD5-201ENST00000016946 CCDC62Q6P9F0 684 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 SCYL1Q96KG9 808 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 PIN4Q9Y237 131 aaKnown RBP11.93□□□□□ -0.5
RGPD5-201ENST00000016946 TBX3O15119 743 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 ECEL1O95672 775 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 KLRK1P26718 216 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 YWHABP31946 246 aaKnown RBP11.93□□□□□ -0.5
RGPD5-201ENST00000016946 ATP2C1P98194 919 aaPredicted RBP11.93□□□□□ -0.5
RGPD5-201ENST00000016946 PPFIBP2Q8ND30 876 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 PPP2R3CQ969Q6 453 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 NHEJ1Q9H9Q4 299 aaPredicted RBP11.93□□□□□ -0.5
RGPD5-201ENST00000016946 PIDD1Q9HB75 910 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 JRKLQ9Y4A0 524 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 ENC1O14682 589 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 RNF40O75150 1001 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 PPFIA4O75335 1185 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 GSTA1P08263 222 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 GSTA2P09210 222 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 AP3M2P53677 418 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 SLC35F6Q8N357 371 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 GUF1Q8N442 669 aaKnown RBP11.93□□□□□ -0.5
RGPD5-201ENST00000016946 GANCQ8TET4 914 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 PTPN22Q9Y2R2 807 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms