RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Gm4312K9J7E2 289 aa11.29□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Fgd3O88842 733 aa11.29□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Neurl1bQ0MW30 546 aa11.29□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Oog4Q4G0C7 502 aa11.29□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Insm1Q63ZV0 521 aa11.29□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Cfap100Q80VN0 613 aa11.29□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Klhl11Q8CE33 709 aa11.29□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Sept6Q9R1T4 434 aa11.29□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Greb1lB9EJV3 1913 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Lmnb2P21619 596 aaKnown RBP11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Gad1P48318 593 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Psg29Q3URN6 468 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Tsr1Q5SWD9 803 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Hdac10Q6P3E7 666 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Ece2Q80Z60 881 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Vgll2Q8BGW8 322 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Eif3cQ8R1B4 911 aaKnown RBP11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Gys2Q8VCB3 704 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Arfgap2Q99K28 520 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Polr3eQ9CZT4 710 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Klra10Q9R1G6 266 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Efna5O08543 228 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 AoahO35298 574 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Nol4P60954 483 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Ankrd13cQ3UX43 541 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Ccdc84Q4VA36 332 aaKnown RBP11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Tmc3Q7TQ69 1130 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Entpd3Q8BFW6 529 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 E4f1Q8CCE9 783 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 NptxrQ99J85 493 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Znf687Q9D2D7 1237 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Zcchc17Q9ESX4 241 aaKnown RBP11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Barx2O08686 283 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 P01734 135 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Igfbp4P47879 254 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Actr2P61161 394 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Sorbs1Q62417 1290 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Gramd4Q8CB44 633 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Ggps1Q9WTN0 300 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Nova2D3YVV7 556 aaKnown RBP11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Rexo5D3YW29 759 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Oog1E9Q5G7 496 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Zfp408H7BX78 710 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 AurkbO70126 345 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Tmem35bQ3U0Y2 150 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Capn13Q3UW68 665 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Pnpla2Q8BJ56 486 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Rps6ka5Q8C050 863 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Slc26a6Q8CIW6 758 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 BbxQ8VBW5 907 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 CactinQ9CS00 772 aaKnown RBP11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Elp3Q9CZX0 547 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Myh15E9Q264 1925 aa11.28□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Ttc13A0A1L1SSC7 844 aa11.27□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Taf4bG5E8Z2 855 aa11.27□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Trim72Q1XH17 477 aa11.27□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Nxf2Q4ZGD8 691 aa11.27□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Zbtb8osQ505B7 168 aa11.27□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Fam214aQ69ZK7 1075 aa11.27□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Lrrc15Q80X72 579 aa11.27□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Tmx4Q8C0L0 335 aa11.27□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Tmod3Q9JHJ0 352 aa11.27□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Plch1Q4KWH5 1682 aa11.27□□□□□ -0.6
Ldb3-205ENSMUST00000090040 Scgb2b18A0A087WPA9 112 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Mt-CybP00158 381 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Acot6Q32Q92 419 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Cypt2Q6P924 180 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Atp1a2Q6PIE5 1020 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Reep2Q8VCD6 254 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 CbsQ91WT9 561 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Vav3Q9R0C8 847 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Sipa1l3G3X9J0 1776 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Opa1P58281 960 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Garem2Q6PAJ3 880 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Slc51aQ8R000 340 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Rpn1Q91YQ5 608 aaKnown RBP11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Itgb5O70309 798 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Tal1P22091 329 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Lrch1P62046 709 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 GclcP97494 637 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Trim6Q8BGE7 488 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Tor4aQ8BH02 426 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Slc38a7Q8BWH0 463 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Fam228aQ8CDW1 299 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Atp6v0a4Q920R6 833 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Hspbp1Q99P31 357 aaKnown RBP11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Emc2Q9CRD2 297 aa11.27□□□□□ -0.61
Ldb3-205ENSMUST00000090040 1700016G14RikA0A286YCZ6 238 aa11.26□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Gm14525B1AZA0 212 aa11.26□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Gm2012B1B0R1 212 aa11.26□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Gimd1E9PW74 217 aa11.26□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Il13ra2O88786 383 aa11.26□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Irf8P23611 424 aa11.26□□□□□ -0.61
Ldb3-205ENSMUST00000090040 AdkP55264 361 aa11.26□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Cbx1P83917 185 aaKnown RBP11.26□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Cct6bQ61390 531 aa11.26□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Ddx3yQ62095 658 aaKnown RBP11.26□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Gm14819Q62478 212 aa11.26□□□□□ -0.61
Ldb3-205ENSMUST00000090040 EtnpplQ8BWU8 499 aa11.26□□□□□ -0.61
Ldb3-205ENSMUST00000090040 Rbm31yQ9D3U4 565 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms