RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Setdb2Q8C267 713 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Rbm28Q8CGC6 750 aaKnown RBP10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Tbc1d23Q8K0F1 684 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Gramd1aQ8VEF1 722 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Pde6cQ91ZQ1 861 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Def8Q99J78 448 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Rsc1a1Q9ER99 582 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Asxl2Q8BZ32 1370 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Camta1A2A891 1682 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Gli2Q0VGT2 1544 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 PtpruB1AUH1 1446 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Plekhg2Q6KAU7 1340 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Gm21190A0A0G2JGJ6 266 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Olfr1145A2AVC7 325 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 PtgisO35074 501 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Parp1P11103 1013 aaKnown RBP10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Prim2P33610 505 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Nat3P50296 290 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Card10P58660 1021 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Mapk6Q61532 720 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Haus4Q8BFT2 363 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 ScaiQ8C8N2 606 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Sec16bQ91XT4 1051 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Riok1Q922Q2 567 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ferd3lQ923Z4 168 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Foxp3Q99JB6 429 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Pdxdc1Q99K01 787 aaKnown RBP10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Mcur1Q9CXD6 340 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Rcan1Q9JHG6 198 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Pus3Q9JI38 481 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Acot3Q9QYR7 432 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Angptl2Q9R045 493 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Myh6Q02566 1938 aaKnown RBP10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Oip5A2AQ14 241 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Atp2c2A7L9Z8 944 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Clip3B9EHT4 547 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 DgkiD3YWQ0 1071 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 5830473C10RikF8VQ07 620 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Galnt4O08832 578 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Enpp1P06802 906 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Cd44P15379 778 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Stat4P42228 749 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 HpdP49429 393 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 CebpaP53566 359 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ccbe1Q3MI99 408 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Gdpd4Q3TT99 632 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Tgm6Q8BM11 706 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Lmbrd2Q8C561 694 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Shisa4Q8CA71 197 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Bola3Q8CEI1 110 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Dennd1aQ8K382 1016 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Nod2Q8K3Z0 1020 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Mylk2Q8VCR8 613 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Lrrc2Q8VDB8 371 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Sesn3Q9CYP7 492 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Pgm3Q9CYR6 542 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Pgm1Q9D0F9 562 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Edf1Q9JMG1 148 aaKnown RBP10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Cd97Q9Z0M6 818 aa10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Tnrc6bQ8BKI2 1810 aaKnown RBP10.47□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Zbtb11G5E8B9 1050 aaKnown RBP10.46□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 TyrobpO54885 114 aa10.46□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ythdf1P59326 559 aaKnown RBP10.46□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Grm2Q14BI2 872 aa10.46□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Q8BGA7 448 aa10.46□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Atp6v1g3Q8BMC1 118 aa10.46□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Pex5lQ8C437 567 aa10.46□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Rab44Q8CB87 725 aa10.46□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Rell1Q8K2J7 272 aa10.46□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Wasf1Q8R5H6 559 aa10.46□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Dhx36Q8VHK9 1001 aaKnown RBP10.46□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ssfa2Q922B9 1252 aa10.46□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Txndc9Q9CQ79 226 aa10.46□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Rnf25Q9QZR0 456 aa10.46□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Chd1P40201 1711 aa10.46□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ttll3A4Q9E5 927 aa10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Mmrn1B2RPV6 1210 aa10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Zbed6D2EAC2 980 aa10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Eef1bO70251 225 aaKnown RBP10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Grpel2O88396 224 aa10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 ItgalP24063 1163 aa10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Foxp1P58462 705 aa10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 PrkacbP68181 351 aa10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 NpeppsQ11011 920 aa10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Yy2Q3TTC2 378 aa10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Ddhd1Q80YA3 547 aa10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Slitrk3Q810B9 980 aa10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Znf879Q8BI99 563 aa10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Clptm1Q8VBZ3 664 aa10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Lrrc14Q8VC16 493 aa10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Vta1Q9CR26 309 aa10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Serbp1Q9CY58 407 aaKnown RBP10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 AenQ9CZI9 336 aaKnown RBP10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Subh2bvQ9D9Z7 123 aa10.46□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 1700024B05RikE9Q6D7 167 aa10.45□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 LynP25911 512 aa10.45□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 RxraP28700 467 aa10.45□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Pax7P47239 503 aa10.45□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Pon1P52430 355 aa10.45□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 GuloP58710 440 aa10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms