RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Rbm41Q8JZV4 413 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Ccdc80Q8R2G6 949 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Rpa1Q8VEE4 623 aaKnown RBP16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Dtnbp1Q91WZ8 352 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Gimap4Q99JY3 219 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 HibadhQ99L13 335 aaKnown RBP16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Igf2bp3Q9CPN8 579 aaKnown RBP16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Mageb16Q9CWV4 363 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Ears2Q9CXJ1 523 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Acsl3Q9CZW4 720 aaKnown RBP16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Mmp15O54732 657 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Stk10O55098 966 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 CraddO88843 199 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Sash1P59808 1230 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Sem1P60897 70 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Epha7Q61772 998 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Ttyh3Q6P5F7 524 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Olfr832Q7TRG9 312 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Galnt17Q7TT15 598 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Acbd3Q8BMP6 525 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 SowahdQ8BY98 327 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Ttc16Q8C1F5 767 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Inpp5fQ8CDA1 1132 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 PdxkQ8K183 312 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 ItpkaQ8R071 459 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Sf3b3Q921M3 1217 aaKnown RBP16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Gpihbp1Q9D1N2 228 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Mphosph6Q9D1Q1 161 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 IvdQ9JHI5 424 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Gfpt2Q9Z2Z9 682 aa16.03■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Atp2c2A7L9Z8 944 aa16.02■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Gm2030D3Z7C4 212 aa16.02■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Rasal2E9PW37 1286 aa16.02■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Ppfibp2O35711 882 aa16.02■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Gdf10P97737 476 aa16.02■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Rgl2Q61193 778 aa16.02■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Six2Q62232 296 aa16.02■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Klhl29Q80T74 875 aa16.02■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Epn2Q8CHU3 595 aa16.02■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Nlrp5Q9R1M5 1163 aa16.02■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Stox1B2RQL2 990 aa16.02■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Stmn4P63042 189 aa16.02■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Zc3h18Q0P678 948 aaKnown RBP16.02■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Rtkn2Q14B46 604 aa16.02■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Prpf38aQ4FK66 312 aaKnown RBP16.02■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Vil1Q62468 827 aa16.02■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Klhdc10Q6PAR0 439 aa16.02■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Stk38lQ7TSE6 464 aa16.02■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Lca5Q80ST9 704 aa16.02■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Scyl2Q8CFE4 930 aa16.02■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 MlxiplQ99MZ3 864 aa16.02■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Paip2Q9D6V8 124 aa16.02■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Orc3Q9JK30 715 aaKnown RBP16.02■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Drg2Q9QXB9 364 aaKnown RBP16.02■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 MtrA6H5Y3 1253 aa16.01■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 M6prP24668 278 aa16.01■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Cxcr2P35343 359 aa16.01■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Cops2P61202 443 aaKnown RBP16.01■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Gas1Q01721 343 aa16.01■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Rrp36Q3UFY0 244 aaKnown RBP16.01■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Zfp957Q3UT76 567 aa16.01■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Taok1Q5F2E8 1001 aa16.01■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 SkiQ60698 725 aa16.01■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Bicd1Q8BR07 835 aa16.01■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Lrrc14Q8VC16 493 aa16.01■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Grhl1Q921D9 618 aa16.01■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Cdc42ep4Q9JM96 349 aaKnown RBP16.01■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Pdcd7Q9WTY1 482 aa16.01■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Gimap9G3X987 291 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Gsg1l2M0QWL6 290 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Wdr70Q3TWF6 657 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Cyb5d1Q5NCY3 228 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Krt15Q61414 452 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Pank4Q80YV4 820 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Ift74Q8BKE9 600 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 PolrmtQ8BKF1 1207 aaKnown RBP16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Tmem120aQ8C1E7 343 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 PpatQ8CIH9 517 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Unc5bQ8K1S3 945 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Cdk8Q8R3L8 464 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Cep19Q9CQA8 163 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Cep72Q9D3R3 646 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Llcfc1Q9D9P8 108 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Myh10Q61879 1976 aaKnown RBP16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Ttll10A4Q9F3 704 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 A430078G23RikE9Q7Y4 484 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Map2k1P31938 393 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Snai1Q02085 264 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 VrtnQ3SYK4 740 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Tatdn3Q3U1C6 294 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Kiaa1211Q5PR69 1207 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Retreg2Q6NS82 541 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Ankrd13aQ80UP5 588 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Q8BGD0 127 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Onecut3Q8K557 490 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Q99KU6 348 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Ctnnbl1Q9CWL8 563 aaKnown RBP16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Zcchc8Q9CYA6 709 aaKnown RBP16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 IqcdQ9D3V1 458 aa16■□□□□ 0.15
Ushbp1-201ENSMUST00000049184 Q9DA42 136 aa16■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms