RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Zfy1P10925 782 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Rrp36Q3UFY0 244 aaKnown RBP12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Xrcc4Q924T3 326 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Paip2Q9D6V8 124 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Tlr9Q9EQU3 1032 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Uchl3Q9JKB1 230 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Nphs1Q9QZS7 1256 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Pde8aO88502 823 aa12.21□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Il15P48346 162 aa12.21□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Mettl14Q3UIK4 456 aa12.21□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Vil1Q62468 827 aa12.21□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Cyp26b1Q811W2 512 aa12.21□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Inpp5fQ8CDA1 1132 aa12.21□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Usp31E9Q6Y8 1344 aa12.21□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Itsn1Q9Z0R4 1714 aa12.21□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Gna14P30677 355 aa12.21□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Tmem120bQ3TA38 339 aa12.21□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Atp13a4Q5XF90 1193 aa12.21□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Iqcj-Schip1A0A088MLT8 559 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Schip1P0DPB4 484 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Tmed8Q3UHI4 326 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ppp1r1bQ60829 194 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ttc16Q8C1F5 767 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Tti1Q91V83 1085 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 IscuQ9D7P6 168 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Rtn3Q9ES97 964 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Cetn2Q9R1K9 172 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Zfp984A2A7A2 547 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 DgkkE9Q7N4 1118 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Kcnu1O54982 1121 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 GclcP97494 637 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Fam81aQ3UXZ6 364 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Psrc1Q9D0P7 329 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 NagaQ9QWR8 415 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Azi2Q9QYP6 405 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Zmym2Q9CU65 1376 aa12.21□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ric1Q69ZJ7 1422 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Fam47eD3YWC7 402 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Rcn1Q05186 325 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ppp1r3aQ99MR9 1089 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Cpb2Q9JHH6 422 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ror2Q9Z138 944 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Cacnb3P54285 484 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Nlrp14Q6B966 993 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Srrm3Q80WV7 648 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Tmem179Q8BHH9 233 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Slc26a6Q8CIW6 758 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Cpa5Q8R4H4 436 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Chchd3Q9CRB9 227 aaKnown RBP12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Snx10Q9CWT3 201 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Mzf1S4R1L6 814 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Cdhr2E9Q7P9 1308 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Plekhg2Q6KAU7 1340 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Crb1Q8VHS2 1405 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Gsta4P24472 222 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Rpusd2Q149F1 553 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Muc3aQ3U5A2 218 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Large2Q5XPT3 690 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 E2f5Q61502 335 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ssxb10Q6XAR7 170 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Krt17Q9QWL7 433 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Shank2Q80Z38 1476 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Apol8A2VDH7 339 aaKnown RBP12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 SarsP26638 512 aaKnown RBP12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ugt1a9Q62452 528 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Elmo3Q8BYZ7 720 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Vps37bQ8R0J7 285 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Fgfr1op2Q9CRA9 253 aa12.2□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ptpn23Q6PB44 1692 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 4933406M09RikG3XA12 479 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Gm21962L7N280 338 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Pcdha4O88689 947 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ets2P15037 468 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Psmc6P62334 389 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ncf1Q09014 390 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Dok7Q18PE0 504 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ints2Q80UK8 1198 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Thap3Q8BJ25 218 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Stk4Q9JI11 487 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Scnn1bQ9WU38 638 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Mtmr9Q9Z2D0 545 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Stmn2P55821 179 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Stxbp3Q60770 592 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Q6PD19 689 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Wnk4Q80UE6 1222 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 IdeQ9JHR7 1019 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Arhgap42B2RQE8 841 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Gsg1l2M0QWL6 290 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ephb2P54763 986 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Nsun7Q14AW5 724 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Mier3Q3UHF3 551 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ttc5Q99LG4 440 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Zc3h13E9Q784 1729 aaKnown RBP12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Tldc2A2ACG1 198 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Dab2ipQ3UHC7 1189 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Coa7Q921H9 231 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 FibpQ9JI19 357 aa12.19□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Hnrnph3D3Z3N4 346 aaKnown RBP12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Atp2a2O55143 1044 aaKnown RBP12.18□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Gdf10P97737 476 aa12.18□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms