RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 GclcP97494 637 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 EgfrQ01279 1210 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Cyp11b1Q3TG86 501 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Arhgef16Q3U5C8 713 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ccna1Q61456 421 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ankrd45Q810N6 248 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Mettl13Q91YR5 698 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Plekha5E9Q6H8 1269 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Nr5a1P33242 462 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Sycp3P70281 254 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Rcn1Q05186 325 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Madcam1Q61826 405 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Kcna6Q61923 529 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tpd52Q62393 224 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Sp4Q62445 782 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ythdf3Q8BYK6 585 aaKnown RBP10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 FtcdQ91XD4 541 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ube4bQ9ES00 1173 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Gm7168A0AUV4 508 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Skap2Q3UND0 358 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Bcap29Q61334 240 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Cep95Q8BVV7 827 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Lmbrd1Q8K0B2 537 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Cdk17Q8K0D0 523 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 LzicQ8K3C3 190 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Q9CR55 154 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 MlklQ9D2Y4 472 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Prpf4Q9DAW6 521 aaKnown RBP10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Rgs9O54828 675 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 PltpP55065 493 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Fhod1Q6P9Q4 1197 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tut1Q8R3F9 869 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Rhobtb3Q9CTN4 611 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Fut8Q9WTS2 575 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Rnaseh1O70338 285 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Sar1aP36536 198 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 WaplQ65Z40 1200 aaKnown RBP10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Drd5Q8BLD9 478 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ttll1Q91V51 423 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Snx5Q9D8U8 404 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 ThegQ9JMB1 375 aa10.83□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ttc38A3KMP2 465 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Zfy1P10925 782 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 InscQ3HNM7 579 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Znf697Q569E7 569 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ephb1Q8CBF3 984 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Dbndd1Q9CZ00 160 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Trmt44Q9D2Q2 713 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ccnyl1D3YUJ3 367 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 GssP51855 474 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Rasa2P58069 847 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Map3k12Q60700 888 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Cyp4x1Q6A152 507 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Atp2b4Q6Q477 1205 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 PudpQ9D5U5 234 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Scyl3Q9DBQ7 735 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Lrrc6O88978 473 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Rab17P35292 214 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Cdc25aP48964 514 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Adprhl2Q8CG72 370 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tasp1Q8R1G1 420 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 RecqlQ9Z129 648 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Fbxl16A2RT62 479 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 AsnsQ61024 561 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Dpp8Q80YA7 892 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ccdc159Q8C963 411 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 SnrkQ8VDU5 748 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 YarsQ91WQ3 528 aaKnown RBP10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Abcf2Q99LE6 628 aaKnown RBP10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tpd52l2Q9CYZ2 220 aaKnown RBP10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Pcdh11xF6ZNL5 1338 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Olfr310B2RVZ1 332 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Gm44G3UW88 330 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Kmt5aQ2YDW7 349 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Trpc6Q61143 930 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Fxr1Q61584 677 aaKnown RBP10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tcp10aQ80W76 438 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 AopepQ8BXQ6 817 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Calhm6Q8C9E8 313 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Dnajb7Q9QYI8 312 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Znf541Q0GGX2 1363 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Cpb1B2RS76 415 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Casp2P29594 452 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Sstr3P30935 428 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ifnar1P33896 590 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Adcy7P51829 1099 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Mphosph8Q3TYA6 858 aaKnown RBP10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Zc4h2Q68FG0 224 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Q80Y73 168 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tmtc4Q8BG19 741 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Miga2Q8BK03 593 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Proser2Q8C5R2 471 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Nudcd3Q8R1N4 363 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ttc1Q91Z38 292 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Krt17Q9QWL7 433 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Gm8994E9PV04 411 aaKnown RBP10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Cdh15P33146 784 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ppp2r5cQ60996 524 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Gm5622Q810Q0 167 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Zbtb41Q811F1 908 aa10.82□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms