RNA–Protein interactions for RNA: snR65

snR65, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR65, Length 100 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR65	snR65	RAD23	P32628	398 aa	Known RBP	0.74	□□□□□ -2.29
snR65	snR65	GPX2	P38143	162 aa		0.74	□□□□□ -2.29
snR65	snR65	BDH1	P39714	382 aa		0.74	□□□□□ -2.29
snR65	snR65	BAT2	P47176	376 aa	Known RBP	0.74	□□□□□ -2.29
snR65	snR65	YGR117C	P53270	476 aa		0.74	□□□□□ -2.29
snR65	snR65	TRM112	P53738	135 aa	Predicted RBP	0.74	□□□□□ -2.29
snR65	snR65	YOL029C	Q08187	201 aa		0.74	□□□□□ -2.29
snR65	snR65	HIF1	Q12373	385 aa		0.74	□□□□□ -2.29
snR65	snR65	GRX6	Q12438	231 aa		0.74	□□□□□ -2.29
snR65	snR65	COX10	P21592	462 aa		0.73	□□□□□ -2.29
snR65	snR65	CHA1	P25379	360 aa	Known RBP	0.73	□□□□□ -2.29
snR65	snR65	ASN2	P49090	572 aa	Known RBP	0.73	□□□□□ -2.29
snR65	snR65	YDR131C	Q03899	556 aa		0.73	□□□□□ -2.29
snR65	snR65	UNG1	P12887	359 aa		0.72	□□□□□ -2.29
snR65	snR65	ECM14	P38836	430 aa		0.72	□□□□□ -2.29
snR65	snR65	YER079W	P40052	210 aa	Known RBP	0.72	□□□□□ -2.29
snR65	snR65	FSH2	Q05015	223 aa		0.72	□□□□□ -2.29
snR65	snR65	CLP1	Q08685	445 aa	Predicted RBP	0.72	□□□□□ -2.29
snR65	snR65	STE2	D6VTK4	431 aa		0.71	□□□□□ -2.3
snR65	snR65	LDS1	P31379	325 aa		0.71	□□□□□ -2.3
snR65	snR65	YKR032W	P36127	104 aa		0.71	□□□□□ -2.3
snR65	snR65	MMF1	P40185	145 aa	Known RBP	0.71	□□□□□ -2.3
snR65	snR65	CIN2	P46670	268 aa		0.71	□□□□□ -2.3
snR65	snR65	YGR015C	P53208	328 aa		0.71	□□□□□ -2.3
snR65	snR65	TIM10	P87108	93 aa		0.71	□□□□□ -2.3
snR65	snR65	SED5	Q01590	340 aa		0.71	□□□□□ -2.3
snR65	snR65	ATP16	Q12165	160 aa		0.71	□□□□□ -2.3
snR65	snR65	COX3	P00420	269 aa		0.7	□□□□□ -2.3
snR65	snR65	DST1	P07273	309 aa		0.7	□□□□□ -2.3
snR65	snR65	CUP2	P15315	225 aa		0.7	□□□□□ -2.3
snR65	snR65	CPT1	P17898	393 aa		0.7	□□□□□ -2.3
snR65	snR65	TIR2	P33890	251 aa		0.7	□□□□□ -2.3
snR65	snR65	MCR1	P36060	302 aa	Known RBP	0.7	□□□□□ -2.3
snR65	snR65	SHE1	P38200	338 aa		0.7	□□□□□ -2.3
snR65	snR65	YMR262W	P38430	313 aa		0.7	□□□□□ -2.3
snR65	snR65	GEP4	P38812	185 aa		0.7	□□□□□ -2.3
snR65	snR65	RBG1	P39729	369 aa		0.7	□□□□□ -2.3
snR65	snR65	MNN5	P46982	586 aa		0.7	□□□□□ -2.3
snR65	snR65	CDH1	P53197	566 aa		0.7	□□□□□ -2.3
snR65	snR65	OCA2	P53949	197 aa		0.7	□□□□□ -2.3
snR65	snR65	YPL113C	Q02961	396 aa		0.7	□□□□□ -2.3
snR65	snR65	API2	Q04413	109 aa		0.7	□□□□□ -2.3
snR65	snR65	URA4	P20051	364 aa		0.69	□□□□□ -2.3
snR65	snR65	BRF1	P29056	596 aa		0.69	□□□□□ -2.3
snR65	snR65	COS9	P36034	407 aa		0.69	□□□□□ -2.3
snR65	snR65	MED6	P38782	295 aa		0.69	□□□□□ -2.3
snR65	snR65	ARF3	P40994	183 aa	RIP-Chip data	0.69	□□□□□ -2.3	not detected
snR65	snR65	YJR054W	P47114	497 aa		0.69	□□□□□ -2.3
snR65	snR65	SHE4	P51534	789 aa		0.69	□□□□□ -2.3
snR65	snR65	KAP120	Q02932	1032 aa		0.69	□□□□□ -2.3
snR65	snR65	YMR010W	Q03687	405 aa		0.69	□□□□□ -2.3
snR65	snR65	RTN2	Q12443	393 aa		0.69	□□□□□ -2.3
snR65	snR65	HPR1	P17629	752 aa	Known RBP	0.68	□□□□□ -2.3
snR65	snR65	CLC1	P17891	233 aa		0.68	□□□□□ -2.3
snR65	snR65	SKO1	Q02100	647 aa		0.68	□□□□□ -2.3
snR65	snR65	SMD1	Q02260	146 aa	Predicted RBP	0.68	□□□□□ -2.3
snR65	snR65	RLP24	Q07915	199 aa	Known RBP	0.68	□□□□□ -2.3
snR65	snR65	YOP1	Q12402	180 aa		0.68	□□□□□ -2.3
snR65	snR65	MET17	P06106	444 aa		0.67	□□□□□ -2.3
snR65	snR65	CLB1	P24868	471 aa		0.67	□□□□□ -2.3
snR65	snR65	ROX1	P25042	368 aa		0.67	□□□□□ -2.3
snR65	snR65	SAS3	P34218	831 aa		0.67	□□□□□ -2.3
snR65	snR65	GGC1	P38988	300 aa		0.67	□□□□□ -2.3
snR65	snR65	PIB2	P53191	635 aa		0.67	□□□□□ -2.3
snR65	snR65	IMH1	Q06704	911 aa	Known RBP	0.67	□□□□□ -2.3
snR65	snR65	MEX67	Q99257	599 aa	Known RBP	0.67	□□□□□ -2.3
snR65	snR65	MET2	P08465	486 aa		0.66	□□□□□ -2.3
snR65	snR65	TOS2	P50078	622 aa		0.66	□□□□□ -2.3
snR65	snR65	PRM1	P53835	661 aa		0.66	□□□□□ -2.3
snR65	snR65	YPL080C	Q02826	108 aa		0.66	□□□□□ -2.3
snR65	snR65	YMR130W	Q04223	302 aa		0.66	□□□□□ -2.3
snR65	snR65	APC4	Q04601	652 aa		0.66	□□□□□ -2.3
snR65	snR65	GTO3	Q04806	366 aa		0.66	□□□□□ -2.3
snR65	snR65	DCS1	Q06151	350 aa		0.66	□□□□□ -2.3
snR65	snR65	YOL159C-A	Q3E769	90 aa		0.66	□□□□□ -2.3
snR65	snR65	HEM4	P06174	275 aa		0.65	□□□□□ -2.31
snR65	snR65	SMC2	P38989	1170 aa	Known RBP	0.65	□□□□□ -2.31
snR65	snR65	CAK1	P43568	368 aa	Predicted RBP	0.65	□□□□□ -2.31
snR65	snR65	STE24	P47154	453 aa		0.65	□□□□□ -2.31
snR65	snR65	HSH155	P49955	971 aa	Known RBP	0.65	□□□□□ -2.31
snR65	snR65	RRN9	P53437	365 aa		0.65	□□□□□ -2.31
snR65	snR65	RPN9	Q04062	393 aa	Known RBP	0.65	□□□□□ -2.31
snR65	snR65	PRP46	Q12417	451 aa	Predicted RBP	0.65	□□□□□ -2.31
snR65	snR65	DAL81	P21657	970 aa		0.64	□□□□□ -2.31
snR65	snR65	DPB3	P27344	201 aa		0.64	□□□□□ -2.31
snR65	snR65	PCL7	P40186	285 aa		0.64	□□□□□ -2.31
snR65	snR65	ATM1	P40416	690 aa		0.64	□□□□□ -2.31
snR65	snR65	ASG7	P46993	209 aa		0.64	□□□□□ -2.31
snR65	snR65	ABM1	P47146	123 aa		0.64	□□□□□ -2.31
snR65	snR65	NAS6	P50086	228 aa		0.64	□□□□□ -2.31
snR65	snR65	SLT2	Q00772	484 aa		0.64	□□□□□ -2.31
snR65	snR65	ARX1	Q03862	593 aa	Known RBP	0.64	□□□□□ -2.31
snR65	snR65	TDH2	P00358	332 aa	Known RBP	0.63	□□□□□ -2.31
snR65	snR65	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.63	□□□□□ -2.31	not detected
snR65	snR65	TPK3	P05986	398 aa		0.63	□□□□□ -2.31
snR65	snR65	CDC21	P06785	304 aa		0.63	□□□□□ -2.31
snR65	snR65	KRE1	P17260	313 aa		0.63	□□□□□ -2.31
snR65	snR65	UTP9	P38882	575 aa	Known RBP	0.63	□□□□□ -2.31
snR65	snR65	ROG1	P53118	685 aa		0.63	□□□□□ -2.31
snR65	snR65	GMC1	Q04399	608 aa		0.63	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms