RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 GPI16P38875 610 aa0.55□□□□□ -2.32
snR55snR55 VID27P40157 782 aa0.55□□□□□ -2.32
snR55snR55 MNN5P46982 586 aa0.55□□□□□ -2.32
snR55snR55 COS5P47187 383 aa0.55□□□□□ -2.32
snR55snR55 YGR015CP53208 328 aa0.55□□□□□ -2.32
snR55snR55 YGR117CP53270 476 aa0.55□□□□□ -2.32
snR55snR55 RRP45Q05636 305 aaKnown RBP0.55□□□□□ -2.32
snR55snR55 COS7Q07788 383 aa0.55□□□□□ -2.32
snR55snR55 DIS3Q08162 1001 aaKnown RBP0.55□□□□□ -2.32
snR55snR55 ATP1P07251 545 aaKnown RBP0.54□□□□□ -2.32
snR55snR55 OTU2P38747 307 aaKnown RBP0.54□□□□□ -2.32
snR55snR55 CIN2P46670 268 aa0.54□□□□□ -2.32
snR55snR55 TOS2P50078 622 aa0.54□□□□□ -2.32
snR55snR55 TIM10P87108 93 aa0.54□□□□□ -2.32
snR55snR55 SPR6Q01684 191 aa0.54□□□□□ -2.32
snR55snR55 SMD1Q02260 146 aaPredicted RBP0.54□□□□□ -2.32
snR55snR55 YPL113CQ02961 396 aa0.54□□□□□ -2.32
snR55snR55 CDD1Q06549 142 aa0.54□□□□□ -2.32
snR55snR55 YOL029CQ08187 201 aa0.54□□□□□ -2.32
snR55snR55 TDH2P00358 332 aaKnown RBP0.53□□□□□ -2.32
snR55snR55 TDH3P00359 332 aaKnown RBP RIP-Chip data0.53□□□□□ -2.32not detected
snR55snR55 CUP2P15315 225 aa0.53□□□□□ -2.32
snR55snR55 MED6P38782 295 aa0.53□□□□□ -2.32
snR55snR55 PCL7P40186 285 aa0.53□□□□□ -2.32
snR55snR55 YJR054WP47114 497 aa0.53□□□□□ -2.32
snR55snR55 SHE4P51534 789 aa0.53□□□□□ -2.32
snR55snR55 YMR155WQ03795 547 aa0.53□□□□□ -2.32
snR55snR55 API2Q04413 109 aa0.53□□□□□ -2.32
snR55snR55 IMH1Q06704 911 aaKnown RBP0.53□□□□□ -2.32
snR55snR55 ATP16Q12165 160 aa0.53□□□□□ -2.32
snR55snR55 TRX2P22803 104 aaKnown RBP0.52□□□□□ -2.33
snR55snR55 YMR262WP38430 313 aa0.52□□□□□ -2.33
snR55snR55 ABM1P47146 123 aa0.52□□□□□ -2.33
snR55snR55 HSH155P49955 971 aaKnown RBP0.52□□□□□ -2.33
snR55snR55 ROG1P53118 685 aa0.52□□□□□ -2.33
snR55snR55 RRN9P53437 365 aa0.52□□□□□ -2.33
snR55snR55 OCA2P53949 197 aa0.52□□□□□ -2.33
snR55snR55 KAP120Q02932 1032 aa0.52□□□□□ -2.33
snR55snR55 GTO3Q04806 366 aa0.52□□□□□ -2.33
snR55snR55 HMS1Q12398 434 aa0.52□□□□□ -2.33
snR55snR55 CPT1P17898 393 aa0.51□□□□□ -2.33
snR55snR55 DAL81P21657 970 aa0.51□□□□□ -2.33
snR55snR55 CLB1P24868 471 aa0.51□□□□□ -2.33
snR55snR55 LDS1P31379 325 aa0.51□□□□□ -2.33
snR55snR55 TIR2P33890 251 aa0.51□□□□□ -2.33
snR55snR55 MCR1P36060 302 aaKnown RBP0.51□□□□□ -2.33
snR55snR55 YKR032WP36127 104 aa0.51□□□□□ -2.33
snR55snR55 NTC20P38302 140 aaPredicted RBP0.51□□□□□ -2.33
snR55snR55 SMC2P38989 1170 aaKnown RBP0.51□□□□□ -2.33
snR55snR55 YGL138CP53122 345 aa0.51□□□□□ -2.33
snR55snR55 CDH1P53197 566 aa0.51□□□□□ -2.33
snR55snR55 FSH2Q05015 223 aa0.51□□□□□ -2.33
snR55snR55 ADH3P07246 375 aaKnown RBP0.5□□□□□ -2.33
snR55snR55 MET2P08465 486 aa0.5□□□□□ -2.33
snR55snR55 GEP4P38812 185 aa0.5□□□□□ -2.33
snR55snR55 NAS6P50086 228 aa0.5□□□□□ -2.33
snR55snR55 TRM112P53738 135 aaPredicted RBP0.5□□□□□ -2.33
snR55snR55 PRM1P53835 661 aa0.5□□□□□ -2.33
snR55snR55 SKO1Q02100 647 aa0.5□□□□□ -2.33
snR55snR55 YDR131CQ03899 556 aa0.5□□□□□ -2.33
snR55snR55 APC4Q04601 652 aa0.5□□□□□ -2.33
snR55snR55 YDR222WQ04925 415 aa0.5□□□□□ -2.33
snR55snR55 PRP46Q12417 451 aaPredicted RBP0.5□□□□□ -2.33
snR55snR55 YOL159C-AQ3E769 90 aa0.5□□□□□ -2.33
snR55snR55 STE2D6VTK4 431 aa0.49□□□□□ -2.33
snR55snR55 DST1P07273 309 aa0.49□□□□□ -2.33
snR55snR55 KRE1P17260 313 aa0.49□□□□□ -2.33
snR55snR55 HPR1P17629 752 aaKnown RBP0.49□□□□□ -2.33
snR55snR55 URA4P20051 364 aa0.49□□□□□ -2.33
snR55snR55 ROX1P25042 368 aa0.49□□□□□ -2.33
snR55snR55 TIP20P33891 701 aa0.49□□□□□ -2.33
snR55snR55 ASP1P38986 381 aaPredicted RBP0.49□□□□□ -2.33
snR55snR55 YER079WP40052 210 aaKnown RBP0.49□□□□□ -2.33
snR55snR55 MMF1P40185 145 aaKnown RBP0.49□□□□□ -2.33
snR55snR55 STE24P47154 453 aa0.49□□□□□ -2.33
snR55snR55 RPN9Q04062 393 aaKnown RBP0.49□□□□□ -2.33
snR55snR55 RLP24Q07915 199 aaKnown RBP0.49□□□□□ -2.33
snR55snR55 SAS3P34218 831 aa0.48□□□□□ -2.33
snR55snR55 GGC1P38988 300 aa0.48□□□□□ -2.33
snR55snR55 YPL080CQ02826 108 aa0.48□□□□□ -2.33
snR55snR55 ARX1Q03862 593 aaKnown RBP0.48□□□□□ -2.33
snR55snR55 GMC1Q04399 608 aa0.48□□□□□ -2.33
snR55snR55 DCS1Q06151 350 aa0.48□□□□□ -2.33
snR55snR55 YOP1Q12402 180 aa0.48□□□□□ -2.33
snR55snR55 RTN2Q12443 393 aa0.48□□□□□ -2.33
snR55snR55 MET17P06106 444 aa0.47□□□□□ -2.33
snR55snR55 HEM4P06174 275 aa0.47□□□□□ -2.33
snR55snR55 SRV2P17555 526 aaKnown RBP0.47□□□□□ -2.33
snR55snR55 CLC1P17891 233 aa0.47□□□□□ -2.33
snR55snR55 BRF1P29056 596 aa0.47□□□□□ -2.33
snR55snR55 TOA2P32774 122 aa0.47□□□□□ -2.33
snR55snR55 YER084WP40057 128 aa0.47□□□□□ -2.33
snR55snR55 CAK1P43568 368 aaPredicted RBP0.47□□□□□ -2.33
snR55snR55 MEX67Q99257 599 aaKnown RBP0.47□□□□□ -2.33
snR55snR55 ISN1Q99312 450 aa0.47□□□□□ -2.33
snR55snR55 PMT2P31382 759 aa0.46□□□□□ -2.34
snR55snR55 COS9P36034 407 aa0.46□□□□□ -2.34
snR55snR55 PIB2P53191 635 aa0.46□□□□□ -2.34
snR55snR55 VPS54Q12071 889 aa0.46□□□□□ -2.34
snR55snR55 YDR018CQ12185 396 aa0.46□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms