RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 ATM1P40416 690 aa1.81□□□□□ -2.12
snR54snR54 AIP1P46680 615 aaKnown RBP1.81□□□□□ -2.12
snR54snR54 YGR067CP53243 804 aa1.81□□□□□ -2.12
snR54snR54 VAC7P53950 1165 aa1.81□□□□□ -2.12
snR54snR54 PRP38Q00723 242 aaPredicted RBP1.81□□□□□ -2.12
snR54snR54 MSC3Q05812 728 aa1.81□□□□□ -2.12
snR54snR54 YLR456WQ06199 204 aa1.81□□□□□ -2.12
snR54snR54 ECM7Q06200 448 aa1.81□□□□□ -2.12
snR54snR54 YLR177WQ06251 628 aa1.81□□□□□ -2.12
snR54snR54 ASA1Q06822 443 aa1.81□□□□□ -2.12
snR54snR54 AEP3Q12089 606 aa1.81□□□□□ -2.12
snR54snR54 SLM5P25345 492 aaKnown RBP1.8□□□□□ -2.12
snR54snR54 MSP1P28737 362 aa1.8□□□□□ -2.12
snR54snR54 TOA1P32773 286 aa1.8□□□□□ -2.12
snR54snR54 SMP1P38128 452 aa1.8□□□□□ -2.12
snR54snR54 QDR3P38227 689 aa1.8□□□□□ -2.12
snR54snR54 ZIM17P42844 174 aa1.8□□□□□ -2.12
snR54snR54 TRF5P48561 642 aaKnown RBP1.8□□□□□ -2.12
snR54snR54 VEL1P53058 206 aa1.8□□□□□ -2.12
snR54snR54 YDR341CQ05506 607 aaKnown RBP1.8□□□□□ -2.12
snR54snR54 RPL12AP0CX53 165 aaKnown RBP1.79□□□□□ -2.12
snR54snR54 RPL12BP0CX54 165 aa1.79□□□□□ -2.12
snR54snR54 RPS18AP0CX55 146 aaKnown RBP1.79□□□□□ -2.12
snR54snR54 RPS18BP0CX56 146 aaPredicted RBP1.79□□□□□ -2.12
snR54snR54 RPC53P25441 422 aa1.79□□□□□ -2.12
snR54snR54 IME2P32581 645 aa1.79□□□□□ -2.12
snR54snR54 ANP1P32629 500 aa1.79□□□□□ -2.12
snR54snR54 NRP1P32770 719 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
snR54snR54 AGA2P32781 87 aa1.79□□□□□ -2.12
snR54snR54 LSM12P38828 187 aaKnown RBP1.79□□□□□ -2.12
snR54snR54 FRT2P39734 528 aa1.79□□□□□ -2.12
snR54snR54 ROG1P53118 685 aa1.79□□□□□ -2.12
snR54snR54 SRO7Q12038 1033 aa1.79□□□□□ -2.12
snR54snR54 YOL085CQ99345 113 aa1.79□□□□□ -2.12
snR54snR54 ASP3-2P0CX77 362 aa1.78□□□□□ -2.12
snR54snR54 ASP3-3P0CX78 362 aa1.78□□□□□ -2.12
snR54snR54 ASP3-4P0CX79 362 aa1.78□□□□□ -2.12
snR54snR54 ASP3-1P0CZ17 362 aa1.78□□□□□ -2.12
snR54snR54 CPR2P23285 205 aa1.78□□□□□ -2.12
snR54snR54 PHO91P27514 894 aa1.78□□□□□ -2.12
snR54snR54 TOA2P32774 122 aa1.78□□□□□ -2.12
snR54snR54 YSC83P32792 385 aa1.78□□□□□ -2.12
snR54snR54 CYM1P32898 989 aa1.78□□□□□ -2.12
snR54snR54 SWE1P32944 819 aa1.78□□□□□ -2.12
snR54snR54 CIN2P46670 268 aa1.78□□□□□ -2.12
snR54snR54 SRB7P47822 140 aa1.78□□□□□ -2.12
snR54snR54 COQ5P49017 307 aa1.78□□□□□ -2.12
snR54snR54 PDX1P16451 410 aa1.77□□□□□ -2.13
snR54snR54 DOA1P36037 715 aa1.77□□□□□ -2.13
snR54snR54 ECM34P38728 170 aa1.77□□□□□ -2.13
snR54snR54 CTK3P46963 296 aaPredicted RBP1.77□□□□□ -2.13
snR54snR54 BIO3P50277 480 aa1.77□□□□□ -2.13
snR54snR54 DIA1P54005 336 aa1.77□□□□□ -2.13
snR54snR54 RMT2Q03305 412 aa1.77□□□□□ -2.13
snR54snR54 PRP3Q03338 469 aaPredicted RBP1.77□□□□□ -2.13
snR54snR54 URC2Q04411 772 aa1.77□□□□□ -2.13
snR54snR54 NSE1Q07913 336 aa1.77□□□□□ -2.13
snR54snR54 SFM1Q12314 213 aa1.77□□□□□ -2.13
snR54snR54 HMS1Q12398 434 aa1.77□□□□□ -2.13
snR54snR54 ARF1P11076 181 aaKnown RBP1.76□□□□□ -2.13
snR54snR54 YBR241CP38142 488 aa1.76□□□□□ -2.13
snR54snR54 RCK2P38623 610 aa1.76□□□□□ -2.13
snR54snR54 CPR7P47103 393 aa1.76□□□□□ -2.13
snR54snR54 RMI1Q02685 241 aa1.76□□□□□ -2.13
snR54snR54 UAF30Q08747 228 aa1.76□□□□□ -2.13
snR54snR54 MEX67Q99257 599 aaKnown RBP1.76□□□□□ -2.13
snR54snR54 EPT1P22140 391 aa1.75□□□□□ -2.13
snR54snR54 RRT13P40042 185 aa1.75□□□□□ -2.13
snR54snR54 SEC27P41811 889 aaKnown RBP1.75□□□□□ -2.13
snR54snR54 ASN2P49090 572 aaKnown RBP1.75□□□□□ -2.13
snR54snR54 YGR111WP53265 400 aa1.75□□□□□ -2.13
snR54snR54 ATP16Q12165 160 aa1.75□□□□□ -2.13
snR54snR54 PDE2P06776 526 aa1.74□□□□□ -2.13
snR54snR54 UNG1P12887 359 aa1.74□□□□□ -2.13
snR54snR54 JNM1P36224 373 aa1.74□□□□□ -2.13
snR54snR54 PAC11P40960 533 aa1.74□□□□□ -2.13
snR54snR54 HST4P53688 370 aa1.74□□□□□ -2.13
snR54snR54 RNH201P53942 307 aa1.74□□□□□ -2.13
snR54snR54 SUB1P54000 292 aaKnown RBP1.74□□□□□ -2.13
snR54snR54 MRX11Q03079 207 aa1.74□□□□□ -2.13
snR54snR54 ERO1Q03103 563 aa1.74□□□□□ -2.13
snR54snR54 FSH2Q05015 223 aa1.74□□□□□ -2.13
snR54snR54 GAT3Q07928 141 aa1.74□□□□□ -2.13
snR54snR54 LDS2Q08218 356 aa1.74□□□□□ -2.13
snR54snR54 DDC1Q08949 612 aa1.74□□□□□ -2.13
snR54snR54 AUS1Q08409 1394 aa1.73□□□□□ -2.13
snR54snR54 MDH1P17505 334 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
snR54snR54 RPL16AP26784 199 aaKnown RBP1.73□□□□□ -2.13
snR54snR54 DBP7P36120 742 aaKnown RBP1.73□□□□□ -2.13
snR54snR54 CDH1P53197 566 aa1.73□□□□□ -2.13
snR54snR54 MEH1Q02205 184 aa1.73□□□□□ -2.13
snR54snR54 YMR010WQ03687 405 aa1.73□□□□□ -2.13
snR54snR54 DCI1Q08558 271 aa1.73□□□□□ -2.13
snR54snR54 HIF1Q12373 385 aa1.73□□□□□ -2.13
snR54snR54 ISA2Q12425 185 aa1.73□□□□□ -2.13
snR54snR54 YAL067W-AQ8TGK6 75 aa1.73□□□□□ -2.13
snR54snR54 FLO11P08640 1367 aa1.72□□□□□ -2.13
snR54snR54 HEM4P06174 275 aa1.72□□□□□ -2.13
snR54snR54 RPS14AP06367 137 aaKnown RBP1.72□□□□□ -2.13
snR54snR54 RNA1P11745 407 aaKnown RBP1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms