RNA–Protein interactions for RNA: YPL178W

CBC2, Transcript of Small subunit of the heterodimeric cap binding complex with Sto1p, yeast

Gene CBC2, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBC2	YPL178W	CBS1	P14066	229 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	REC107	P21651	314 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	MCK1	P21965	375 aa	Known RBP	4.95	□□□□□ -1.62
CBC2	YPL178W	CMK2	P22517	447 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	PBN1	P25580	416 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	CWH43	P25618	953 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	HIR2	P32480	875 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	LYP1	P32487	611 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	TOD6	P34219	525 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	TSL1	P38427	1098 aa	Known RBP	4.95	□□□□□ -1.62
CBC2	YPL178W	FAA2	P39518	744 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	RSP5	P39940	809 aa	Known RBP	4.95	□□□□□ -1.62
CBC2	YPL178W	DLD3	P39976	496 aa	Known RBP	4.95	□□□□□ -1.62
CBC2	YPL178W	QDR2	P40474	542 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	CIN1	P40987	1014 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	ARF3	P40994	183 aa	RIP-Chip data	4.95	□□□□□ -1.62	not detected
CBC2	YPL178W	DIM1	P41819	318 aa	Known RBP	4.95	□□□□□ -1.62
CBC2	YPL178W	SHR5	P41912	237 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	SNO3	P43544	222 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	VPS73	P53142	486 aa	Known RBP	4.95	□□□□□ -1.62
CBC2	YPL178W	YGR079W	P53249	370 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	TWF1	P53250	332 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	TPC1	P53257	314 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	SWP1	Q02795	286 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	ATP25	Q03153	612 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	RIM13	Q03792	727 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	RAD30	Q04049	632 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	REH1	Q06709	432 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	BSC1	Q12140	328 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	RPL7B	Q12213	244 aa	Known RBP	4.95	□□□□□ -1.62
CBC2	YPL178W	YOR214C	Q12282	236 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	YDL199C	Q12407	687 aa		4.95	□□□□□ -1.62
CBC2	YPL178W	PRP46	Q12417	451 aa	Predicted RBP	4.95	□□□□□ -1.62
CBC2	YPL178W	GPH1	P06738	902 aa	Known RBP	4.94	□□□□□ -1.62
CBC2	YPL178W	CYT1	P07143	309 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	THR1	P17423	357 aa	Known RBP	4.94	□□□□□ -1.62
CBC2	YPL178W	FAR1	P21268	830 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	LHP1	P33399	275 aa	Known RBP	4.94	□□□□□ -1.62
CBC2	YPL178W	TUL1	P36096	758 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	MCM7	P38132	845 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	YHL012W	P38709	493 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	RBG1	P39729	369 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	MET28	P40573	187 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	PRY1	P47032	299 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	SEH1	P53011	349 aa	Known RBP	4.94	□□□□□ -1.62
CBC2	YPL178W	YNL181W	P53878	407 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	YNL095C	P53932	642 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	NAN1	Q02931	896 aa	Known RBP	4.94	□□□□□ -1.62
CBC2	YPL178W	SPO19	Q03029	223 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	URC2	Q04411	772 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	ENT2	Q05785	613 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	YLR446W	Q06204	433 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	DBP9	Q06218	594 aa	Known RBP	4.94	□□□□□ -1.62
CBC2	YPL178W	GPI11	Q06636	219 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	ASA1	Q06822	443 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	DCI1	Q08558	271 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	TMS1	Q12116	473 aa		4.94	□□□□□ -1.62
CBC2	YPL178W	PFK27	Q12471	397 aa	Predicted RBP	4.94	□□□□□ -1.62
CBC2	YPL178W	IPP1	P00817	287 aa	Known RBP	4.93	□□□□□ -1.62
CBC2	YPL178W	RPL24A	P04449	155 aa	Known RBP	4.93	□□□□□ -1.62
CBC2	YPL178W	KGD1	P20967	1014 aa	Known RBP	4.93	□□□□□ -1.62
CBC2	YPL178W	MRPS28	P21771	286 aa		4.93	□□□□□ -1.62
CBC2	YPL178W	RPB10	P22139	70 aa		4.93	□□□□□ -1.62
CBC2	YPL178W	GRR1	P24814	1151 aa		4.93	□□□□□ -1.62
CBC2	YPL178W	CLB4	P24871	460 aa		4.93	□□□□□ -1.62
CBC2	YPL178W	RER1	P25560	188 aa		4.93	□□□□□ -1.62
CBC2	YPL178W	STP22	P25604	385 aa		4.93	□□□□□ -1.62
CBC2	YPL178W	ARP2	P32381	391 aa	Known RBP	4.93	□□□□□ -1.62
CBC2	YPL178W	SKG1	P36169	355 aa		4.93	□□□□□ -1.62
CBC2	YPL178W	YBR241C	P38142	488 aa		4.93	□□□□□ -1.62
CBC2	YPL178W	SEA4	P38164	1038 aa		4.93	□□□□□ -1.62
CBC2	YPL178W	OM14	P38325	134 aa		4.93	□□□□□ -1.62
CBC2	YPL178W	YLF2	P38746	405 aa		4.93	□□□□□ -1.62
CBC2	YPL178W	ECM10	P39987	644 aa		4.93	□□□□□ -1.62
CBC2	YPL178W	HOL1	P53389	586 aa		4.93	□□□□□ -1.62
CBC2	YPL178W	DCP2	P53550	970 aa	Known RBP	4.93	□□□□□ -1.62
CBC2	YPL178W	DBP6	P53734	629 aa	Known RBP	4.93	□□□□□ -1.62
CBC2	YPL178W	PDR16	P53860	351 aa	Known RBP	4.93	□□□□□ -1.62
CBC2	YPL178W	SKI8	Q02793	397 aa	Predicted RBP	4.93	□□□□□ -1.62
CBC2	YPL178W	CGI121	Q03705	181 aa	Known RBP	4.93	□□□□□ -1.62
CBC2	YPL178W	HFD1	Q04458	532 aa		4.93	□□□□□ -1.62
CBC2	YPL178W	YPS7	Q06325	596 aa		4.93	□□□□□ -1.62
CBC2	YPL178W	YPL272C	Q08984	517 aa		4.93	□□□□□ -1.62
CBC2	YPL178W	TY1A-DR3	Q12441	440 aa		4.93	□□□□□ -1.62
CBC2	YPL178W	RPS21B	Q3E754	87 aa	Known RBP	4.93	□□□□□ -1.62
CBC2	YPL178W	NUM1	Q00402	2748 aa		4.92	□□□□□ -1.62
CBC2	YPL178W	PRP8	P33334	2413 aa	Known RBP	4.92	□□□□□ -1.62
CBC2	YPL178W	FLP1	P03870	423 aa		4.92	□□□□□ -1.62
CBC2	YPL178W	ARF1	P11076	181 aa	Known RBP	4.92	□□□□□ -1.62
CBC2	YPL178W	HMG1	P12683	1054 aa		4.92	□□□□□ -1.62
CBC2	YPL178W	KSS1	P14681	368 aa		4.92	□□□□□ -1.62
CBC2	YPL178W	YME2	P32843	850 aa		4.92	□□□□□ -1.62
CBC2	YPL178W	SEF1	P34228	1148 aa		4.92	□□□□□ -1.62
CBC2	YPL178W	LOT5	P34234	306 aa		4.92	□□□□□ -1.62
CBC2	YPL178W	MOH1	P38191	138 aa		4.92	□□□□□ -1.62
CBC2	YPL178W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
CBC2	YPL178W	YEL020C	P39994	560 aa		4.92	□□□□□ -1.62
CBC2	YPL178W	SOK1	P40317	901 aa		4.92	□□□□□ -1.62
CBC2	YPL178W	SMK1	P41808	388 aa		4.92	□□□□□ -1.62
CBC2	YPL178W	NOP9	P47077	666 aa	Known RBP	4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 128.2 ms