RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W HTZ1Q12692 134 aaKnown RBP2.03□□□□□ -2.08
BRO1YPL084W MDS3P53094 1487 aa2.03□□□□□ -2.09
BRO1YPL084W TAL1P15019 335 aaKnown RBP2.02□□□□□ -2.09
BRO1YPL084W SAG1P20840 650 aa2.02□□□□□ -2.09
BRO1YPL084W TRX1P22217 103 aaKnown RBP2.02□□□□□ -2.09
BRO1YPL084W YEL045CP32616 141 aa2.02□□□□□ -2.09
BRO1YPL084W UIP5P36137 443 aa2.02□□□□□ -2.09
BRO1YPL084W LYS12P40495 371 aaKnown RBP2.02□□□□□ -2.09
BRO1YPL084W SEC27P41811 889 aaKnown RBP2.02□□□□□ -2.09
BRO1YPL084W EGT2P42835 1041 aa2.02□□□□□ -2.09
BRO1YPL084W BIR1P47134 954 aa2.02□□□□□ -2.09
BRO1YPL084W MST27P53176 234 aa2.02□□□□□ -2.09
BRO1YPL084W GIS2P53849 153 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
BRO1YPL084W PAL1Q05518 499 aaKnown RBP2.02□□□□□ -2.09
BRO1YPL084W YPR078CQ06813 372 aa2.02□□□□□ -2.09
BRO1YPL084W JID1Q12350 301 aa2.02□□□□□ -2.09
BRO1YPL084W NBL1Q3E7Y6 73 aa2.02□□□□□ -2.09
BRO1YPL084W FSH3Q99369 266 aa2.02□□□□□ -2.09
BRO1YPL084W THR4P16120 514 aaKnown RBP2.02□□□□□ -2.09
BRO1YPL084W RPB5P20434 215 aa2.02□□□□□ -2.09
BRO1YPL084W MRPL8P22353 238 aa2.02□□□□□ -2.09
BRO1YPL084W AIM10P39965 576 aaKnown RBP2.02□□□□□ -2.09
BRO1YPL084W FYV8P46949 817 aaKnown RBP2.02□□□□□ -2.09
BRO1YPL084W BNS1P50084 137 aa2.02□□□□□ -2.09
BRO1YPL084W CRH1P53301 507 aa2.02□□□□□ -2.09
BRO1YPL084W AIM33Q04516 312 aa2.02□□□□□ -2.09
BRO1YPL084W GAT3Q07928 141 aa2.02□□□□□ -2.09
BRO1YPL084W GLE1Q12315 538 aa2.02□□□□□ -2.09
BRO1YPL084W MAS1P10507 462 aa2.01□□□□□ -2.09
BRO1YPL084W ISY1P21374 235 aaPredicted RBP2.01□□□□□ -2.09
BRO1YPL084W YEL043WP32618 956 aa2.01□□□□□ -2.09
BRO1YPL084W YOX1P34161 385 aa2.01□□□□□ -2.09
BRO1YPL084W PRM1P53835 661 aa2.01□□□□□ -2.09
BRO1YPL084W PDR16P53860 351 aaKnown RBP2.01□□□□□ -2.09
BRO1YPL084W YMR310CQ04867 317 aaPredicted RBP2.01□□□□□ -2.09
BRO1YPL084W TMC1Q08422 150 aaPredicted RBP2.01□□□□□ -2.09
BRO1YPL084W RBD2Q12270 262 aa2.01□□□□□ -2.09
BRO1YPL084W WTM1Q12363 437 aaKnown RBP2.01□□□□□ -2.09
BRO1YPL084W YNL208WP40159 199 aaKnown RBP2.01□□□□□ -2.09
BRO1YPL084W SDT1P53078 280 aa2.01□□□□□ -2.09
BRO1YPL084W SHS1Q07657 551 aa2.01□□□□□ -2.09
BRO1YPL084W PLP2Q12017 286 aa2.01□□□□□ -2.09
BRO1YPL084W PCL9Q12477 304 aa2.01□□□□□ -2.09
BRO1YPL084W AIM45Q12480 344 aaKnown RBP2.01□□□□□ -2.09
BRO1YPL084W MEX67Q99257 599 aaKnown RBP2.01□□□□□ -2.09
BRO1YPL084W MAS2P11914 482 aa2□□□□□ -2.09
BRO1YPL084W VMA2P16140 517 aaKnown RBP2□□□□□ -2.09
BRO1YPL084W RTC2P38279 296 aa2□□□□□ -2.09
BRO1YPL084W MIG3P39943 394 aa2□□□□□ -2.09
BRO1YPL084W OXA1P39952 402 aa2□□□□□ -2.09
BRO1YPL084W SEC9P40357 651 aa2□□□□□ -2.09
BRO1YPL084W ATG18P43601 500 aa2□□□□□ -2.09
BRO1YPL084W SMP3Q04174 516 aa2□□□□□ -2.09
BRO1YPL084W YLH47Q06493 454 aa2□□□□□ -2.09
BRO1YPL084W ARR1Q06596 294 aa2□□□□□ -2.09
BRO1YPL084W YDL114WQ07530 308 aa2□□□□□ -2.09
BRO1YPL084W MFG1Q07684 458 aa2□□□□□ -2.09
BRO1YPL084W RPS16AP0CX51 143 aaKnown RBP2□□□□□ -2.09
BRO1YPL084W RPS16BP0CX52 143 aaKnown RBP2□□□□□ -2.09
BRO1YPL084W REV1P12689 985 aa2□□□□□ -2.09
BRO1YPL084W CKI1P20485 582 aa2□□□□□ -2.09
BRO1YPL084W KRR1P25586 316 aaPredicted RBP2□□□□□ -2.09
BRO1YPL084W HMX1P32339 317 aa2□□□□□ -2.09
BRO1YPL084W EFB1P32471 206 aaKnown RBP2□□□□□ -2.09
BRO1YPL084W SPO23P33757 523 aa2□□□□□ -2.09
BRO1YPL084W POP2P39008 433 aa2□□□□□ -2.09
BRO1YPL084W PTI1P39927 425 aaPredicted RBP2□□□□□ -2.09
BRO1YPL084W LCP5P40079 357 aaPredicted RBP2□□□□□ -2.09
BRO1YPL084W PRE5P40302 234 aaKnown RBP2□□□□□ -2.09
BRO1YPL084W UTP18P40362 594 aaPredicted RBP2□□□□□ -2.09
BRO1YPL084W CLD1P53264 445 aa2□□□□□ -2.09
BRO1YPL084W HST1P53685 503 aa2□□□□□ -2.09
BRO1YPL084W CMS1Q07897 291 aaKnown RBP2□□□□□ -2.09
BRO1YPL084W YOL075CQ08234 1294 aa2□□□□□ -2.09
BRO1YPL084W YDL199CQ12407 687 aa2□□□□□ -2.09
BRO1YPL084W NAG1Q8TGN9 163 aa2□□□□□ -2.09
BRO1YPL084W DET1Q99288 334 aaKnown RBP2□□□□□ -2.09
BRO1YPL084W GRR1P24814 1151 aa1.99□□□□□ -2.09
BRO1YPL084W LDB16P25587 256 aa1.99□□□□□ -2.09
BRO1YPL084W PRR1P28708 518 aa1.99□□□□□ -2.09
BRO1YPL084W FUN26P31381 517 aa1.99□□□□□ -2.09
BRO1YPL084W HXT1P32465 570 aa1.99□□□□□ -2.09
BRO1YPL084W SSE1P32589 693 aaKnown RBP1.99□□□□□ -2.09
BRO1YPL084W VAM7P32912 316 aa1.99□□□□□ -2.09
BRO1YPL084W ANR2P36090 516 aaPredicted RBP1.99□□□□□ -2.09
BRO1YPL084W CTK3P46963 296 aaPredicted RBP1.99□□□□□ -2.09
BRO1YPL084W LIP2Q06005 328 aa1.99□□□□□ -2.09
BRO1YPL084W STF1P01098 86 aa1.99□□□□□ -2.09
BRO1YPL084W AAT2P23542 418 aaKnown RBP1.99□□□□□ -2.09
BRO1YPL084W HXT2P23585 541 aa1.99□□□□□ -2.09
BRO1YPL084W NUP2P32499 720 aa1.99□□□□□ -2.09
BRO1YPL084W BAT1P38891 393 aaKnown RBP1.99□□□□□ -2.09
BRO1YPL084W SHE4P51534 789 aa1.99□□□□□ -2.09
BRO1YPL084W REX2P54964 269 aaKnown RBP1.99□□□□□ -2.09
BRO1YPL084W YMR010WQ03687 405 aa1.99□□□□□ -2.09
BRO1YPL084W SPH1Q06160 661 aa1.99□□□□□ -2.09
BRO1YPL084W RPS18AP0CX55 146 aaKnown RBP1.98□□□□□ -2.09
BRO1YPL084W RPS18BP0CX56 146 aaPredicted RBP1.98□□□□□ -2.09
BRO1YPL084W RPL16AP26784 199 aaKnown RBP1.98□□□□□ -2.09
BRO1YPL084W ZUO1P32527 433 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms