RNA–Protein interactions for RNA: YMR284W

YKU70, Transcript of Subunit of the telomeric Ku complex (Yku70p-Yku80p), yeast

Gene YKU70, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKU70	YMR284W	RAD23	P32628	398 aa	Known RBP	0.53	□□□□□ -2.32
YKU70	YMR284W	GPX2	P38143	162 aa		0.53	□□□□□ -2.32
YKU70	YMR284W	NTC20	P38302	140 aa	Predicted RBP	0.53	□□□□□ -2.32
YKU70	YMR284W	BDH1	P39714	382 aa		0.53	□□□□□ -2.32
YKU70	YMR284W	VHS2	P40463	436 aa		0.53	□□□□□ -2.32
YKU70	YMR284W	BAT2	P47176	376 aa	Known RBP	0.53	□□□□□ -2.32
YKU70	YMR284W	ASN2	P49090	572 aa	Known RBP	0.53	□□□□□ -2.32
YKU70	YMR284W	YMR155W	Q03795	547 aa		0.53	□□□□□ -2.32
YKU70	YMR284W	CDD1	Q06549	142 aa		0.53	□□□□□ -2.32
YKU70	YMR284W	YOL029C	Q08187	201 aa		0.53	□□□□□ -2.32
YKU70	YMR284W	COX3	P00420	269 aa		0.52	□□□□□ -2.33
YKU70	YMR284W	ECM14	P38836	430 aa		0.52	□□□□□ -2.33
YKU70	YMR284W	TIM10	P87108	93 aa		0.52	□□□□□ -2.33
YKU70	YMR284W	SED5	Q01590	340 aa		0.52	□□□□□ -2.33
YKU70	YMR284W	UNG1	P12887	359 aa		0.52	□□□□□ -2.33
YKU70	YMR284W	COX10	P21592	462 aa		0.52	□□□□□ -2.33
YKU70	YMR284W	SHE1	P38200	338 aa		0.52	□□□□□ -2.33
YKU70	YMR284W	RBG1	P39729	369 aa		0.52	□□□□□ -2.33
YKU70	YMR284W	TRM112	P53738	135 aa	Predicted RBP	0.52	□□□□□ -2.33
YKU70	YMR284W	YDR131C	Q03899	556 aa		0.52	□□□□□ -2.33
YKU70	YMR284W	FSH2	Q05015	223 aa		0.52	□□□□□ -2.33
YKU70	YMR284W	CLP1	Q08685	445 aa	Predicted RBP	0.52	□□□□□ -2.33
YKU70	YMR284W	ATP16	Q12165	160 aa		0.52	□□□□□ -2.33
YKU70	YMR284W	STE2	D6VTK4	431 aa		0.51	□□□□□ -2.33
YKU70	YMR284W	CIN2	P46670	268 aa		0.51	□□□□□ -2.33
YKU70	YMR284W	MNN5	P46982	586 aa		0.51	□□□□□ -2.33
YKU70	YMR284W	YGR015C	P53208	328 aa		0.51	□□□□□ -2.33
YKU70	YMR284W	OCA2	P53949	197 aa		0.51	□□□□□ -2.33
YKU70	YMR284W	YPL113C	Q02961	396 aa		0.51	□□□□□ -2.33
YKU70	YMR284W	DST1	P07273	309 aa		0.5	□□□□□ -2.33
YKU70	YMR284W	CUP2	P15315	225 aa		0.5	□□□□□ -2.33
YKU70	YMR284W	URA4	P20051	364 aa		0.5	□□□□□ -2.33
YKU70	YMR284W	LDS1	P31379	325 aa		0.5	□□□□□ -2.33
YKU70	YMR284W	TIR2	P33890	251 aa		0.5	□□□□□ -2.33
YKU70	YMR284W	YMR262W	P38430	313 aa		0.5	□□□□□ -2.33
YKU70	YMR284W	YER079W	P40052	210 aa	Known RBP	0.5	□□□□□ -2.33
YKU70	YMR284W	MMF1	P40185	145 aa	Known RBP	0.5	□□□□□ -2.33
YKU70	YMR284W	YJR054W	P47114	497 aa		0.5	□□□□□ -2.33
YKU70	YMR284W	SHE4	P51534	789 aa		0.5	□□□□□ -2.33
YKU70	YMR284W	CDH1	P53197	566 aa		0.5	□□□□□ -2.33
YKU70	YMR284W	SMD1	Q02260	146 aa	Predicted RBP	0.5	□□□□□ -2.33
YKU70	YMR284W	KAP120	Q02932	1032 aa		0.5	□□□□□ -2.33
YKU70	YMR284W	API2	Q04413	109 aa		0.5	□□□□□ -2.33
YKU70	YMR284W	CPT1	P17898	393 aa		0.5	□□□□□ -2.33
YKU70	YMR284W	MCR1	P36060	302 aa	Known RBP	0.5	□□□□□ -2.33
YKU70	YMR284W	YKR032W	P36127	104 aa		0.5	□□□□□ -2.33
YKU70	YMR284W	GEP4	P38812	185 aa		0.5	□□□□□ -2.33
YKU70	YMR284W	SKO1	Q02100	647 aa		0.5	□□□□□ -2.33
YKU70	YMR284W	IMH1	Q06704	911 aa	Known RBP	0.5	□□□□□ -2.33
YKU70	YMR284W	CLC1	P17891	233 aa		0.49	□□□□□ -2.33
YKU70	YMR284W	BRF1	P29056	596 aa		0.49	□□□□□ -2.33
YKU70	YMR284W	COS9	P36034	407 aa		0.49	□□□□□ -2.33
YKU70	YMR284W	MED6	P38782	295 aa		0.49	□□□□□ -2.33
YKU70	YMR284W	ARF3	P40994	183 aa	RIP-Chip data	0.49	□□□□□ -2.33	not detected
YKU70	YMR284W	TOS2	P50078	622 aa		0.49	□□□□□ -2.33
YKU70	YMR284W	DCS1	Q06151	350 aa		0.49	□□□□□ -2.33
YKU70	YMR284W	RTN2	Q12443	393 aa		0.49	□□□□□ -2.33
YKU70	YMR284W	MET17	P06106	444 aa		0.48	□□□□□ -2.33
YKU70	YMR284W	MET2	P08465	486 aa		0.48	□□□□□ -2.33
YKU70	YMR284W	HPR1	P17629	752 aa	Known RBP	0.48	□□□□□ -2.33
YKU70	YMR284W	CLB1	P24868	471 aa		0.48	□□□□□ -2.33
YKU70	YMR284W	ROX1	P25042	368 aa		0.48	□□□□□ -2.33
YKU70	YMR284W	SAS3	P34218	831 aa		0.48	□□□□□ -2.33
YKU70	YMR284W	GGC1	P38988	300 aa		0.48	□□□□□ -2.33
YKU70	YMR284W	ABM1	P47146	123 aa		0.48	□□□□□ -2.33
YKU70	YMR284W	PRM1	P53835	661 aa		0.48	□□□□□ -2.33
YKU70	YMR284W	RLP24	Q07915	199 aa	Known RBP	0.48	□□□□□ -2.33
YKU70	YMR284W	YOP1	Q12402	180 aa		0.48	□□□□□ -2.33
YKU70	YMR284W	YOL159C-A	Q3E769	90 aa		0.48	□□□□□ -2.33
YKU70	YMR284W	MEX67	Q99257	599 aa	Known RBP	0.48	□□□□□ -2.33
YKU70	YMR284W	STE24	P47154	453 aa		0.48	□□□□□ -2.33
YKU70	YMR284W	HSH155	P49955	971 aa	Known RBP	0.48	□□□□□ -2.33
YKU70	YMR284W	PIB2	P53191	635 aa		0.48	□□□□□ -2.33
YKU70	YMR284W	RRN9	P53437	365 aa		0.48	□□□□□ -2.33
YKU70	YMR284W	YMR010W	Q03687	405 aa		0.48	□□□□□ -2.33
YKU70	YMR284W	RPN9	Q04062	393 aa	Known RBP	0.48	□□□□□ -2.33
YKU70	YMR284W	APC4	Q04601	652 aa		0.48	□□□□□ -2.33
YKU70	YMR284W	GTO3	Q04806	366 aa		0.48	□□□□□ -2.33
YKU70	YMR284W	PRP46	Q12417	451 aa	Predicted RBP	0.48	□□□□□ -2.33
YKU70	YMR284W	HEM4	P06174	275 aa		0.47	□□□□□ -2.33
YKU70	YMR284W	KRE1	P17260	313 aa		0.47	□□□□□ -2.33
YKU70	YMR284W	DAL81	P21657	970 aa		0.47	□□□□□ -2.33
YKU70	YMR284W	UTP9	P38882	575 aa	Known RBP	0.47	□□□□□ -2.33
YKU70	YMR284W	SMC2	P38989	1170 aa	Known RBP	0.47	□□□□□ -2.33
YKU70	YMR284W	PCL7	P40186	285 aa		0.47	□□□□□ -2.33
YKU70	YMR284W	CAK1	P43568	368 aa	Predicted RBP	0.47	□□□□□ -2.33
YKU70	YMR284W	NAS6	P50086	228 aa		0.47	□□□□□ -2.33
YKU70	YMR284W	ROG1	P53118	685 aa		0.47	□□□□□ -2.33
YKU70	YMR284W	YPL080C	Q02826	108 aa		0.47	□□□□□ -2.33
YKU70	YMR284W	ARX1	Q03862	593 aa	Known RBP	0.47	□□□□□ -2.33
YKU70	YMR284W	YMR130W	Q04223	302 aa		0.47	□□□□□ -2.33
YKU70	YMR284W	TDH2	P00358	332 aa	Known RBP	0.46	□□□□□ -2.34
YKU70	YMR284W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.46	□□□□□ -2.34	not detected
YKU70	YMR284W	DPB3	P27344	201 aa		0.46	□□□□□ -2.34
YKU70	YMR284W	TIP20	P33891	701 aa		0.46	□□□□□ -2.34
YKU70	YMR284W	GMC1	Q04399	608 aa		0.46	□□□□□ -2.34
YKU70	YMR284W	YDL109C	Q12103	647 aa		0.46	□□□□□ -2.34
YKU70	YMR284W	ADH3	P07246	375 aa	Known RBP	0.45	□□□□□ -2.34
YKU70	YMR284W	ATM1	P40416	690 aa		0.45	□□□□□ -2.34
YKU70	YMR284W	SLT2	Q00772	484 aa		0.45	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 77.9 ms