RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C RMD5Q12508 421 aa2.47□□□□□ -2.01
NYV1YLR093C CDC37P06101 506 aaKnown RBP2.46□□□□□ -2.02
NYV1YLR093C CDC21P06785 304 aa2.46□□□□□ -2.02
NYV1YLR093C RPL12AP0CX53 165 aaKnown RBP2.46□□□□□ -2.02
NYV1YLR093C RPL12BP0CX54 165 aa2.46□□□□□ -2.02
NYV1YLR093C GCD2P12754 651 aaPredicted RBP2.46□□□□□ -2.02
NYV1YLR093C THR4P16120 514 aaKnown RBP2.46□□□□□ -2.02
NYV1YLR093C TOA2P32774 122 aa2.46□□□□□ -2.02
NYV1YLR093C PTK1P36002 662 aaPredicted RBP2.46□□□□□ -2.02
NYV1YLR093C KAP104P38217 918 aaKnown RBP2.46□□□□□ -2.02
NYV1YLR093C MNN9P39107 395 aaKnown RBP2.46□□□□□ -2.02
NYV1YLR093C AIP1P46680 615 aaKnown RBP2.46□□□□□ -2.02
NYV1YLR093C STD1Q02794 444 aa2.46□□□□□ -2.02
NYV1YLR093C ECM18Q04623 453 aa2.46□□□□□ -2.02
NYV1YLR093C ECM7Q06200 448 aa2.46□□□□□ -2.02
NYV1YLR093C AAD15Q08361 143 aa2.46□□□□□ -2.02
NYV1YLR093C DST1P07273 309 aa2.45□□□□□ -2.02
NYV1YLR093C GRR1P24814 1151 aa2.45□□□□□ -2.02
NYV1YLR093C PET18P25362 215 aa2.45□□□□□ -2.02
NYV1YLR093C CSE2P33308 149 aa2.45□□□□□ -2.02
NYV1YLR093C ATP3P38077 311 aaKnown RBP2.45□□□□□ -2.02
NYV1YLR093C YBL028CP38202 106 aa2.45□□□□□ -2.02
NYV1YLR093C LYS1P38998 373 aaRIP-Chip data2.45□□□□□ -2.02 RIP-Chip
NYV1YLR093C YER079WP40052 210 aaKnown RBP2.45□□□□□ -2.02
NYV1YLR093C AIM20P40451 204 aa2.45□□□□□ -2.02
NYV1YLR093C YFR018CP43599 363 aa2.45□□□□□ -2.02
NYV1YLR093C HMS2P47175 358 aa2.45□□□□□ -2.02
NYV1YLR093C TOS2P50078 622 aa2.45□□□□□ -2.02
NYV1YLR093C RRP46P53256 223 aaPredicted RBP2.45□□□□□ -2.02
NYV1YLR093C RET3P53600 189 aa2.45□□□□□ -2.02
NYV1YLR093C ALF1P53904 254 aa2.45□□□□□ -2.02
NYV1YLR093C GRX3Q03835 250 aa2.45□□□□□ -2.02
NYV1YLR093C YLH47Q06493 454 aa2.45□□□□□ -2.02
NYV1YLR093C YPR091CQ06833 770 aa2.45□□□□□ -2.02
NYV1YLR093C SGT1Q08446 395 aa2.45□□□□□ -2.02
NYV1YLR093C PEX27Q08580 376 aa2.45□□□□□ -2.02
NYV1YLR093C SRL2Q12020 392 aa2.45□□□□□ -2.02
NYV1YLR093C AIM45Q12480 344 aaKnown RBP2.45□□□□□ -2.02
NYV1YLR093C TEF1P02994 458 aaKnown RBP2.44□□□□□ -2.02
NYV1YLR093C ARG4P04076 463 aaPredicted RBP2.44□□□□□ -2.02
NYV1YLR093C OPI3P05375 206 aa2.44□□□□□ -2.02
NYV1YLR093C RNR2P09938 399 aaKnown RBP2.44□□□□□ -2.02
NYV1YLR093C RPS16AP0CX51 143 aaKnown RBP2.44□□□□□ -2.02
NYV1YLR093C RPS16BP0CX52 143 aaKnown RBP2.44□□□□□ -2.02
NYV1YLR093C GAL3P13045 520 aa2.44□□□□□ -2.02
NYV1YLR093C PUT4P15380 627 aa2.44□□□□□ -2.02
NYV1YLR093C SPO12P17123 173 aa2.44□□□□□ -2.02
NYV1YLR093C VPS45P38932 577 aa2.44□□□□□ -2.02
NYV1YLR093C MIG3P39943 394 aa2.44□□□□□ -2.02
NYV1YLR093C LCP5P40079 357 aaPredicted RBP2.44□□□□□ -2.02
NYV1YLR093C STE24P47154 453 aa2.44□□□□□ -2.02
NYV1YLR093C CWC22P53333 577 aaKnown RBP2.44□□□□□ -2.02
NYV1YLR093C FRE4P53746 719 aa2.44□□□□□ -2.02
NYV1YLR093C TIM11P81449 96 aaPredicted RBP2.44□□□□□ -2.02
NYV1YLR093C EGD1Q02642 157 aaKnown RBP2.44□□□□□ -2.02
NYV1YLR093C MMT1Q03218 510 aa2.44□□□□□ -2.02
NYV1YLR093C REX4Q08237 289 aa2.44□□□□□ -2.02
NYV1YLR093C PFK27Q12471 397 aaPredicted RBP2.44□□□□□ -2.02
NYV1YLR093C PSK1P31374 1356 aa2.44□□□□□ -2.02
NYV1YLR093C MAS1P10507 462 aa2.43□□□□□ -2.02
NYV1YLR093C RNA1P11745 407 aaKnown RBP2.43□□□□□ -2.02
NYV1YLR093C MSS116P15424 664 aaKnown RBP2.43□□□□□ -2.02
NYV1YLR093C HXT2P23585 541 aa2.43□□□□□ -2.02
NYV1YLR093C MSK1P32048 576 aa2.43□□□□□ -2.02
NYV1YLR093C HMX1P32339 317 aa2.43□□□□□ -2.02
NYV1YLR093C SKN1P33336 771 aa2.43□□□□□ -2.02
NYV1YLR093C SPT10P35208 640 aa2.43□□□□□ -2.02
NYV1YLR093C GCD14P46959 383 aaPredicted RBP2.43□□□□□ -2.02
NYV1YLR093C PHB2P50085 310 aa2.43□□□□□ -2.02
NYV1YLR093C NDE2Q07500 545 aa2.43□□□□□ -2.02
NYV1YLR093C YPS3Q12303 508 aa2.43□□□□□ -2.02
NYV1YLR093C IZH2Q12442 317 aa2.43□□□□□ -2.02
NYV1YLR093C YIL002W-AQ3E7Z5 69 aa2.43□□□□□ -2.02
NYV1YLR093C GAL7P08431 366 aa2.42□□□□□ -2.02
NYV1YLR093C MAS2P11914 482 aa2.42□□□□□ -2.02
NYV1YLR093C DBR1P24309 405 aaKnown RBP2.42□□□□□ -2.02
NYV1YLR093C SWC5P38326 303 aa2.42□□□□□ -2.02
NYV1YLR093C ALP1P38971 573 aa2.42□□□□□ -2.02
NYV1YLR093C MMF1P40185 145 aaKnown RBP2.42□□□□□ -2.02
NYV1YLR093C CDC40P40968 455 aaPredicted RBP2.42□□□□□ -2.02
NYV1YLR093C RIB4P50861 169 aaPredicted RBP2.42□□□□□ -2.02
NYV1YLR093C YGL114WP53134 725 aa2.42□□□□□ -2.02
NYV1YLR093C RRN9P53437 365 aa2.42□□□□□ -2.02
NYV1YLR093C DBP6P53734 629 aaKnown RBP2.42□□□□□ -2.02
NYV1YLR093C SPO19Q03029 223 aa2.42□□□□□ -2.02
NYV1YLR093C CAB5Q03941 241 aa2.42□□□□□ -2.02
NYV1YLR093C AIM33Q04516 312 aa2.42□□□□□ -2.02
NYV1YLR093C YMR310CQ04867 317 aaPredicted RBP2.42□□□□□ -2.02
NYV1YLR093C YLR297WQ05899 129 aa2.42□□□□□ -2.02
NYV1YLR093C KAP95Q06142 861 aaKnown RBP2.42□□□□□ -2.02
NYV1YLR093C YLR413WQ06689 675 aa2.42□□□□□ -2.02
NYV1YLR093C YDR262WQ12331 272 aa2.42□□□□□ -2.02
NYV1YLR093C JID1Q12350 301 aa2.42□□□□□ -2.02
NYV1YLR093C ARF1P11076 181 aaKnown RBP2.41□□□□□ -2.02
NYV1YLR093C SLM5P25345 492 aaKnown RBP2.41□□□□□ -2.02
NYV1YLR093C TIM17P39515 158 aa2.41□□□□□ -2.02
NYV1YLR093C PRP39P39682 629 aaKnown RBP2.41□□□□□ -2.02
NYV1YLR093C YMR134WP40207 237 aa2.41□□□□□ -2.02
NYV1YLR093C YHC3P47040 408 aa2.41□□□□□ -2.02
NYV1YLR093C PNC1P53184 216 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms