RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C GPM3Q12326 303 aa3.19□□□□□ -1.9
RPF2YKR081C HMS1Q12398 434 aa3.19□□□□□ -1.9
RPF2YKR081C CMK2P22517 447 aa3.18□□□□□ -1.9
RPF2YKR081C TOA2P32774 122 aa3.18□□□□□ -1.9
RPF2YKR081C SOL2P37262 315 aa3.18□□□□□ -1.9
RPF2YKR081C BMT2P38278 337 aa3.18□□□□□ -1.9
RPF2YKR081C REX2P54964 269 aaKnown RBP3.18□□□□□ -1.9
RPF2YKR081C ENT5Q03769 411 aaKnown RBP3.18□□□□□ -1.9
RPF2YKR081C YHC1Q05900 231 aaKnown RBP3.18□□□□□ -1.9
RPF2YKR081C RAX2Q12465 1220 aa3.18□□□□□ -1.9
RPF2YKR081C RPS18AP0CX55 146 aaKnown RBP3.17□□□□□ -1.9
RPF2YKR081C RPS18BP0CX56 146 aaPredicted RBP3.17□□□□□ -1.9
RPF2YKR081C SRP72P38688 640 aaKnown RBP3.17□□□□□ -1.9
RPF2YKR081C PEX22P39718 180 aa3.17□□□□□ -1.9
RPF2YKR081C RTT102P53330 157 aa3.17□□□□□ -1.9
RPF2YKR081C CIK1Q01649 594 aa3.17□□□□□ -1.9
RPF2YKR081C PIN3Q06449 215 aa3.17□□□□□ -1.9
RPF2YKR081C AAD15Q08361 143 aa3.17□□□□□ -1.9
RPF2YKR081C DTR1P38125 572 aa3.16□□□□□ -1.9
RPF2YKR081C PFF1P38244 976 aa3.16□□□□□ -1.9
RPF2YKR081C CHL4P38907 458 aa3.16□□□□□ -1.9
RPF2YKR081C KEG1P43614 200 aa3.16□□□□□ -1.9
RPF2YKR081C ATP22P50273 684 aaPredicted RBP3.16□□□□□ -1.9
RPF2YKR081C RPL21AQ02753 160 aaKnown RBP3.16□□□□□ -1.9
RPF2YKR081C YMR010WQ03687 405 aa3.16□□□□□ -1.9
RPF2YKR081C MSC3Q05812 728 aa3.16□□□□□ -1.9
RPF2YKR081C LDS2Q08218 356 aa3.16□□□□□ -1.9
RPF2YKR081C MCT1Q12283 360 aa3.16□□□□□ -1.9
RPF2YKR081C RPL21BQ12672 160 aaKnown RBP3.16□□□□□ -1.9
RPF2YKR081C SMC6Q12749 1114 aa3.16□□□□□ -1.9
RPF2YKR081C SEC27P41811 889 aaKnown RBP3.15□□□□□ -1.91
RPF2YKR081C ABM1P47146 123 aa3.15□□□□□ -1.91
RPF2YKR081C PRP38Q00723 242 aaPredicted RBP3.15□□□□□ -1.91
RPF2YKR081C ERO1Q03103 563 aa3.15□□□□□ -1.91
RPF2YKR081C SFM1Q12314 213 aa3.15□□□□□ -1.91
RPF2YKR081C TPI1P00942 248 aaKnown RBP3.14□□□□□ -1.91
RPF2YKR081C RNA1P11745 407 aaKnown RBP3.14□□□□□ -1.91
RPF2YKR081C CHA1P25379 360 aaKnown RBP3.14□□□□□ -1.91
RPF2YKR081C YER184CP39961 794 aa3.14□□□□□ -1.91
RPF2YKR081C NOP6Q07623 225 aaKnown RBP3.14□□□□□ -1.91
RPF2YKR081C MAS2P11914 482 aa3.13□□□□□ -1.91
RPF2YKR081C WSC4P38739 605 aa3.13□□□□□ -1.91
RPF2YKR081C YML6P51998 286 aa3.13□□□□□ -1.91
RPF2YKR081C SEH1P53011 349 aaKnown RBP3.13□□□□□ -1.91
RPF2YKR081C VAC7P53950 1165 aa3.13□□□□□ -1.91
RPF2YKR081C MEH1Q02205 184 aa3.13□□□□□ -1.91
RPF2YKR081C YLR177WQ06251 628 aa3.13□□□□□ -1.91
RPF2YKR081C SPE3Q12074 293 aaKnown RBP3.13□□□□□ -1.91
RPF2YKR081C HIF1Q12373 385 aa3.13□□□□□ -1.91
RPF2YKR081C PRM7Q12459 698 aa3.13□□□□□ -1.91
RPF2YKR081C ASP3-2P0CX77 362 aa3.12□□□□□ -1.91
RPF2YKR081C ASP3-3P0CX78 362 aa3.12□□□□□ -1.91
RPF2YKR081C ASP3-4P0CX79 362 aa3.12□□□□□ -1.91
RPF2YKR081C ASP3-1P0CZ17 362 aa3.12□□□□□ -1.91
RPF2YKR081C PUT4P15380 627 aa3.12□□□□□ -1.91
RPF2YKR081C KAP104P38217 918 aaKnown RBP3.12□□□□□ -1.91
RPF2YKR081C CIN2P46670 268 aa3.12□□□□□ -1.91
RPF2YKR081C GYL1Q04322 720 aa3.12□□□□□ -1.91
RPF2YKR081C RPS19AP07280 144 aaKnown RBP3.11□□□□□ -1.91
RPF2YKR081C RPS19BP07281 144 aaPredicted RBP3.11□□□□□ -1.91
RPF2YKR081C RRP7P25368 297 aaPredicted RBP3.11□□□□□ -1.91
RPF2YKR081C LDS1P31379 325 aa3.11□□□□□ -1.91
RPF2YKR081C TOA1P32773 286 aa3.11□□□□□ -1.91
RPF2YKR081C WSS1P38838 269 aa3.11□□□□□ -1.91
RPF2YKR081C MNL1P38888 796 aa3.11□□□□□ -1.91
RPF2YKR081C ASN2P49090 572 aaKnown RBP3.11□□□□□ -1.91
RPF2YKR081C CWC22P53333 577 aaKnown RBP3.11□□□□□ -1.91
RPF2YKR081C HST1P53685 503 aa3.11□□□□□ -1.91
RPF2YKR081C YDR115WQ04598 105 aa3.11□□□□□ -1.91
RPF2YKR081C RPN5Q12250 445 aaKnown RBP3.11□□□□□ -1.91
RPF2YKR081C LDB17Q12342 491 aa3.11□□□□□ -1.91
RPF2YKR081C RPL1AP0CX43 217 aaKnown RBP3.1□□□□□ -1.91
RPF2YKR081C RPL1BP0CX44 217 aaKnown RBP3.1□□□□□ -1.91
RPF2YKR081C RPL16AP26784 199 aaKnown RBP3.1□□□□□ -1.91
RPF2YKR081C VMA8P32610 256 aaKnown RBP3.1□□□□□ -1.91
RPF2YKR081C ANP1P32629 500 aa3.1□□□□□ -1.91
RPF2YKR081C HEM14P40012 539 aa3.1□□□□□ -1.91
RPF2YKR081C IPK1Q06667 281 aa3.1□□□□□ -1.91
RPF2YKR081C HEM4P06174 275 aa3.09□□□□□ -1.91
RPF2YKR081C MRPL8P22353 238 aa3.09□□□□□ -1.91
RPF2YKR081C FMT1P32785 401 aa3.09□□□□□ -1.91
RPF2YKR081C PDC2P32896 925 aa3.09□□□□□ -1.91
RPF2YKR081C PXA2P34230 853 aa3.09□□□□□ -1.91
RPF2YKR081C PFS2P42841 465 aaKnown RBP3.09□□□□□ -1.91
RPF2YKR081C YGR067CP53243 804 aa3.09□□□□□ -1.91
RPF2YKR081C VPS9P54787 451 aa3.09□□□□□ -1.91
RPF2YKR081C FSH2Q05015 223 aa3.09□□□□□ -1.91
RPF2YKR081C YDL109CQ12103 647 aa3.09□□□□□ -1.91
RPF2YKR081C YPS3Q12303 508 aa3.09□□□□□ -1.91
RPF2YKR081C SRN2Q99176 213 aa3.09□□□□□ -1.91
RPF2YKR081C ECM34P38728 170 aa3.08□□□□□ -1.92
RPF2YKR081C RNH201P53942 307 aa3.08□□□□□ -1.92
RPF2YKR081C SRO7Q12038 1033 aa3.08□□□□□ -1.92
RPF2YKR081C TIR4Q12218 487 aaPredicted RBP3.08□□□□□ -1.92
RPF2YKR081C BI3Q9ZZW7 517 aa3.08□□□□□ -1.92
RPF2YKR081C UNG1P12887 359 aa3.07□□□□□ -1.92
RPF2YKR081C TPS2P31688 896 aaKnown RBP3.07□□□□□ -1.92
RPF2YKR081C COS9P36034 407 aa3.07□□□□□ -1.92
RPF2YKR081C YBR241CP38142 488 aa3.07□□□□□ -1.92
RPF2YKR081C SPP381P38282 291 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms