RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W TRI1Q05024 226 aa2.34□□□□□ -2.03
TRA1YHR099W TOS4Q06266 489 aa2.34□□□□□ -2.03
TRA1YHR099W GRC3Q07845 632 aa2.34□□□□□ -2.03
TRA1YHR099W YMR084WA2P2R3 262 aa2.34□□□□□ -2.04
TRA1YHR099W SCEIP03882 235 aa2.34□□□□□ -2.04
TRA1YHR099W LEU1P07264 779 aaKnown RBP2.34□□□□□ -2.04
TRA1YHR099W ZRC1P20107 442 aa2.34□□□□□ -2.04
TRA1YHR099W GEX1P25596 615 aa2.34□□□□□ -2.04
TRA1YHR099W HOM6P31116 359 aaKnown RBP2.34□□□□□ -2.04
TRA1YHR099W TIM23P32897 222 aa2.34□□□□□ -2.04
TRA1YHR099W CHK1P38147 527 aa2.34□□□□□ -2.04
TRA1YHR099W MED6P38782 295 aa2.34□□□□□ -2.04
TRA1YHR099W YPT11P48559 417 aa2.34□□□□□ -2.04
TRA1YHR099W YGR283CP53336 341 aaPredicted RBP2.34□□□□□ -2.04
TRA1YHR099W ATP19P81451 68 aa2.34□□□□□ -2.04
TRA1YHR099W ELP3Q02908 557 aaKnown RBP2.34□□□□□ -2.04
TRA1YHR099W TDA5Q06417 326 aaKnown RBP2.34□□□□□ -2.04
TRA1YHR099W TPO1Q07824 586 aa2.34□□□□□ -2.04
TRA1YHR099W HNT3Q08702 217 aa2.34□□□□□ -2.04
TRA1YHR099W NUS1Q12063 375 aa2.34□□□□□ -2.04
TRA1YHR099W SLO1Q3E784 85 aa2.34□□□□□ -2.04
TRA1YHR099W COA6Q3E846 104 aa2.34□□□□□ -2.04
TRA1YHR099W AI4P03878 556 aa2.34□□□□□ -2.04
TRA1YHR099W TRK1P12685 1235 aa2.34□□□□□ -2.04
TRA1YHR099W ALG1P16661 449 aa2.34□□□□□ -2.04
TRA1YHR099W DAL2P25335 343 aa2.34□□□□□ -2.04
TRA1YHR099W TRK2P28584 889 aa2.34□□□□□ -2.04
TRA1YHR099W ARO2P28777 376 aaKnown RBP2.34□□□□□ -2.04
TRA1YHR099W YME1P32795 747 aa2.34□□□□□ -2.04
TRA1YHR099W YPT31P38555 223 aaKnown RBP2.34□□□□□ -2.04
TRA1YHR099W GRE3P38715 327 aaKnown RBP RIP-Chip data2.34□□□□□ -2.04not detected
TRA1YHR099W ACA1P39970 489 aa2.34□□□□□ -2.04
TRA1YHR099W FMP30Q02883 468 aa2.34□□□□□ -2.04
TRA1YHR099W ERP1Q05359 219 aaKnown RBP2.34□□□□□ -2.04
TRA1YHR099W SNT309Q06091 175 aaPredicted RBP2.34□□□□□ -2.04
TRA1YHR099W ISU2Q12056 156 aa2.34□□□□□ -2.04
TRA1YHR099W GTT2Q12390 233 aa2.34□□□□□ -2.04
TRA1YHR099W HIS1P00498 297 aaKnown RBP2.34□□□□□ -2.04
TRA1YHR099W ATP6P00854 259 aa2.34□□□□□ -2.04
TRA1YHR099W AI1P03875 834 aa2.34□□□□□ -2.04
TRA1YHR099W RPL26AP05743 127 aaKnown RBP2.34□□□□□ -2.04
TRA1YHR099W RPL11AP0C0W9 174 aaKnown RBP2.34□□□□□ -2.04
TRA1YHR099W PET54P10834 293 aa2.34□□□□□ -2.04
TRA1YHR099W SED4P25365 1065 aa2.34□□□□□ -2.04
TRA1YHR099W HMX1P32339 317 aa2.34□□□□□ -2.04
TRA1YHR099W PPH3P32345 308 aa2.34□□□□□ -2.04
TRA1YHR099W ROT2P38138 954 aa2.34□□□□□ -2.04
TRA1YHR099W OST1P41543 476 aaKnown RBP2.34□□□□□ -2.04
TRA1YHR099W JHD2P47156 728 aaPredicted RBP2.34□□□□□ -2.04
TRA1YHR099W UBC12P52491 188 aa2.34□□□□□ -2.04
TRA1YHR099W SLD3P53135 668 aa2.34□□□□□ -2.04
TRA1YHR099W RPL26BP53221 127 aaKnown RBP2.34□□□□□ -2.04
TRA1YHR099W YPR109WQ06104 294 aa2.34□□□□□ -2.04
TRA1YHR099W LDB18Q07887 179 aa2.34□□□□□ -2.04
TRA1YHR099W MRX4Q12467 430 aa2.34□□□□□ -2.04
TRA1YHR099W RPL11BQ3E757 174 aaPredicted RBP2.34□□□□□ -2.04
TRA1YHR099W TY2B-BQ12491 1770 aa2.34□□□□□ -2.04
TRA1YHR099W CPA1P07258 411 aaKnown RBP2.34□□□□□ -2.04
TRA1YHR099W FUR1P18562 216 aaKnown RBP2.34□□□□□ -2.04
TRA1YHR099W RPB10P22139 70 aa2.34□□□□□ -2.04
TRA1YHR099W YEF1P32622 495 aa2.34□□□□□ -2.04
TRA1YHR099W SHE1P38200 338 aa2.34□□□□□ -2.04
TRA1YHR099W ECM2P38241 364 aaKnown RBP2.34□□□□□ -2.04
TRA1YHR099W RCK1P38622 512 aa2.34□□□□□ -2.04
TRA1YHR099W YHL026CP38740 315 aa2.34□□□□□ -2.04
TRA1YHR099W YJR054WP47114 497 aa2.34□□□□□ -2.04
TRA1YHR099W YGR053CP53234 283 aa2.34□□□□□ -2.04
TRA1YHR099W ASI2P53895 289 aa2.34□□□□□ -2.04
TRA1YHR099W TEN1Q07921 160 aa2.34□□□□□ -2.04
TRA1YHR099W ERD2P18414 219 aa2.33□□□□□ -2.04
TRA1YHR099W DIT2P21595 489 aa2.33□□□□□ -2.04
TRA1YHR099W PGM1P33401 570 aaKnown RBP2.33□□□□□ -2.04
TRA1YHR099W MRPL11P36521 249 aaPredicted RBP2.33□□□□□ -2.04
TRA1YHR099W YBR138CP38277 524 aa2.33□□□□□ -2.04
TRA1YHR099W TDA3P38758 523 aa2.33□□□□□ -2.04
TRA1YHR099W FLX1P40464 311 aa2.33□□□□□ -2.04
TRA1YHR099W SMK1P41808 388 aa2.33□□□□□ -2.04
TRA1YHR099W STB2P46679 850 aa2.33□□□□□ -2.04
TRA1YHR099W YNR063WP53749 607 aa2.33□□□□□ -2.04
TRA1YHR099W YNR065CP53751 1116 aa2.33□□□□□ -2.04
TRA1YHR099W DCS1Q06151 350 aa2.33□□□□□ -2.04
TRA1YHR099W YDR306CQ06640 478 aa2.33□□□□□ -2.04
TRA1YHR099W PMT7Q06644 662 aa2.33□□□□□ -2.04
TRA1YHR099W IRC10Q08118 586 aa2.33□□□□□ -2.04
TRA1YHR099W YDL176WQ12027 708 aa2.33□□□□□ -2.04
TRA1YHR099W SEC65P29478 273 aa2.33□□□□□ -2.04
TRA1YHR099W STT3P39007 718 aaKnown RBP2.33□□□□□ -2.04
TRA1YHR099W GET2P40056 285 aa2.33□□□□□ -2.04
TRA1YHR099W YJL068CP40363 299 aa2.33□□□□□ -2.04
TRA1YHR099W GON7P46984 123 aa2.33□□□□□ -2.04
TRA1YHR099W RAD17P48581 401 aa2.33□□□□□ -2.04
TRA1YHR099W SOL4P53315 255 aa2.33□□□□□ -2.04
TRA1YHR099W Q0255P03881 472 aa2.33□□□□□ -2.04
TRA1YHR099W ADE4P04046 510 aaKnown RBP2.33□□□□□ -2.04
TRA1YHR099W RPL3P14126 387 aaKnown RBP2.33□□□□□ -2.04
TRA1YHR099W FUN14P18411 198 aa2.33□□□□□ -2.04
TRA1YHR099W ERG6P25087 383 aaKnown RBP2.33□□□□□ -2.04
TRA1YHR099W PPA2P28239 310 aa2.33□□□□□ -2.04
TRA1YHR099W REC114P32841 428 aa2.33□□□□□ -2.04
TRA1YHR099W OM14P38325 134 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms