RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W TOA1P32773 286 aa1.08□□□□□ -2.24
CUL3YGR003W ECT1P33412 323 aa1.08□□□□□ -2.24
CUL3YGR003W SMP1P38128 452 aa1.08□□□□□ -2.24
CUL3YGR003W ECM8P38246 354 aa1.08□□□□□ -2.24
CUL3YGR003W FHL1P39521 936 aa1.08□□□□□ -2.24
CUL3YGR003W MAM33P40513 266 aa1.08□□□□□ -2.24
CUL3YGR003W ENT5Q03769 411 aaKnown RBP1.08□□□□□ -2.24
CUL3YGR003W SPC19Q03954 165 aa1.08□□□□□ -2.24
CUL3YGR003W YPQ1Q12010 308 aa1.08□□□□□ -2.24
CUL3YGR003W RUP1Q12242 671 aa1.08□□□□□ -2.24
CUL3YGR003W PUT4P15380 627 aa1.07□□□□□ -2.24
CUL3YGR003W RRP7P25368 297 aaPredicted RBP1.07□□□□□ -2.24
CUL3YGR003W PMT2P31382 759 aa1.07□□□□□ -2.24
CUL3YGR003W CLD1P53264 445 aa1.07□□□□□ -2.24
CUL3YGR003W PRP38Q00723 242 aaPredicted RBP1.07□□□□□ -2.24
CUL3YGR003W PRP3Q03338 469 aaPredicted RBP1.07□□□□□ -2.24
CUL3YGR003W YPR078CQ06813 372 aa1.07□□□□□ -2.24
CUL3YGR003W LOT6Q07923 191 aa1.07□□□□□ -2.24
CUL3YGR003W LDS2Q08218 356 aa1.07□□□□□ -2.24
CUL3YGR003W IES4Q08561 116 aa1.07□□□□□ -2.24
CUL3YGR003W PXA2P34230 853 aa1.07□□□□□ -2.24
CUL3YGR003W PRY2P36110 329 aa1.07□□□□□ -2.24
CUL3YGR003W MRPS9P38120 278 aa1.07□□□□□ -2.24
CUL3YGR003W GPI18P38211 433 aa1.07□□□□□ -2.24
CUL3YGR003W SRP72P38688 640 aaKnown RBP1.07□□□□□ -2.24
CUL3YGR003W WSC4P38739 605 aa1.07□□□□□ -2.24
CUL3YGR003W CHL4P38907 458 aa1.07□□□□□ -2.24
CUL3YGR003W TPS1Q00764 495 aaKnown RBP1.07□□□□□ -2.24
CUL3YGR003W VHS1Q03785 461 aa1.07□□□□□ -2.24
CUL3YGR003W PRM6Q04705 352 aa1.07□□□□□ -2.24
CUL3YGR003W YLR177WQ06251 628 aa1.07□□□□□ -2.24
CUL3YGR003W YDR061WQ12298 539 aa1.07□□□□□ -2.24
CUL3YGR003W DET1Q99288 334 aaKnown RBP1.07□□□□□ -2.24
CUL3YGR003W RPS16AP0CX51 143 aaKnown RBP1.06□□□□□ -2.24
CUL3YGR003W RPS16BP0CX52 143 aaKnown RBP1.06□□□□□ -2.24
CUL3YGR003W RPS18AP0CX55 146 aaKnown RBP1.06□□□□□ -2.24
CUL3YGR003W RPS18BP0CX56 146 aaPredicted RBP1.06□□□□□ -2.24
CUL3YGR003W ARF1P11076 181 aaKnown RBP1.06□□□□□ -2.24
CUL3YGR003W GIT1P25346 518 aa1.06□□□□□ -2.24
CUL3YGR003W PAC11P40960 533 aa1.06□□□□□ -2.24
CUL3YGR003W RTT102P53330 157 aa1.06□□□□□ -2.24
CUL3YGR003W REX2P54964 269 aaKnown RBP1.06□□□□□ -2.24
CUL3YGR003W RMI1Q02685 241 aa1.06□□□□□ -2.24
CUL3YGR003W RPL21AQ02753 160 aaKnown RBP1.06□□□□□ -2.24
CUL3YGR003W MSC3Q05812 728 aa1.06□□□□□ -2.24
CUL3YGR003W YLH47Q06493 454 aa1.06□□□□□ -2.24
CUL3YGR003W SLM3Q12093 417 aa1.06□□□□□ -2.24
CUL3YGR003W RFM1Q12192 310 aa1.06□□□□□ -2.24
CUL3YGR003W RAX2Q12465 1220 aa1.06□□□□□ -2.24
CUL3YGR003W PAR32Q12515 295 aaKnown RBP1.06□□□□□ -2.24
CUL3YGR003W RPL21BQ12672 160 aaKnown RBP1.06□□□□□ -2.24
CUL3YGR003W PDE2P06776 526 aa1.05□□□□□ -2.24
CUL3YGR003W RAD5P32849 1169 aaPredicted RBP1.05□□□□□ -2.24
CUL3YGR003W DTR1P38125 572 aa1.05□□□□□ -2.24
CUL3YGR003W BMT2P38278 337 aa1.05□□□□□ -2.24
CUL3YGR003W LRP1P38801 184 aaKnown RBP1.05□□□□□ -2.24
CUL3YGR003W BUD27P43573 796 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
CUL3YGR003W CDH1P53197 566 aa1.05□□□□□ -2.24
CUL3YGR003W VHT1P53241 593 aa1.05□□□□□ -2.24
CUL3YGR003W MKC7P53379 596 aa1.05□□□□□ -2.24
CUL3YGR003W HST1P53685 503 aa1.05□□□□□ -2.24
CUL3YGR003W TRM112P53738 135 aaPredicted RBP1.05□□□□□ -2.24
CUL3YGR003W YDR541CQ03049 344 aa1.05□□□□□ -2.24
CUL3YGR003W SCS7Q03529 384 aa1.05□□□□□ -2.24
CUL3YGR003W IPK1Q06667 281 aa1.05□□□□□ -2.24
CUL3YGR003W ATP16Q12165 160 aa1.05□□□□□ -2.24
CUL3YGR003W YOR012WQ12351 137 aa1.05□□□□□ -2.24
CUL3YGR003W PCL9Q12477 304 aa1.05□□□□□ -2.24
CUL3YGR003W TPI1P00942 248 aaKnown RBP1.05□□□□□ -2.24
CUL3YGR003W MAS2P11914 482 aa1.05□□□□□ -2.24
CUL3YGR003W DAP2P18962 818 aa1.05□□□□□ -2.24
CUL3YGR003W MNE1P24720 663 aa1.05□□□□□ -2.24
CUL3YGR003W DPH2P32461 534 aa1.05□□□□□ -2.24
CUL3YGR003W MDL1P33310 695 aa1.05□□□□□ -2.24
CUL3YGR003W DOA1P36037 715 aa1.05□□□□□ -2.24
CUL3YGR003W WSS1P38838 269 aa1.05□□□□□ -2.24
CUL3YGR003W SEC27P41811 889 aaKnown RBP1.05□□□□□ -2.24
CUL3YGR003W ASN2P49090 572 aaKnown RBP1.05□□□□□ -2.24
CUL3YGR003W BIO3P50277 480 aa1.05□□□□□ -2.24
CUL3YGR003W YML6P51998 286 aa1.05□□□□□ -2.24
CUL3YGR003W FLC3P53121 802 aa1.05□□□□□ -2.24
CUL3YGR003W YDR115WQ04598 105 aa1.05□□□□□ -2.24
CUL3YGR003W SFM1Q12314 213 aa1.05□□□□□ -2.24
CUL3YGR003W DEP1P31385 405 aa1.04□□□□□ -2.24
CUL3YGR003W ZUO1P32527 433 aaKnown RBP1.04□□□□□ -2.24
CUL3YGR003W PFS2P42841 465 aaKnown RBP1.04□□□□□ -2.24
CUL3YGR003W YJR054WP47114 497 aa1.04□□□□□ -2.24
CUL3YGR003W TRF5P48561 642 aaKnown RBP1.04□□□□□ -2.24
CUL3YGR003W CIK1Q01649 594 aa1.04□□□□□ -2.24
CUL3YGR003W ECM11Q04110 302 aa1.04□□□□□ -2.24
CUL3YGR003W SFG1Q12507 346 aa1.04□□□□□ -2.24
CUL3YGR003W FOL3Q12676 427 aaPredicted RBP1.04□□□□□ -2.24
CUL3YGR003W YOR338WQ99326 363 aa1.04□□□□□ -2.24
CUL3YGR003W FAR1P21268 830 aa1.04□□□□□ -2.24
CUL3YGR003W DBR1P24309 405 aaKnown RBP1.04□□□□□ -2.24
CUL3YGR003W AGA2P32781 87 aa1.04□□□□□ -2.24
CUL3YGR003W DBP7P36120 742 aaKnown RBP1.04□□□□□ -2.24
CUL3YGR003W YER184CP39961 794 aa1.04□□□□□ -2.24
CUL3YGR003W PRM7Q12459 698 aa1.04□□□□□ -2.24
CUL3YGR003W AIM45Q12480 344 aaKnown RBP1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms