RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C NOP58Q12499 511 aaKnown RBP3.53□□□□□ -1.84
OTU1YFL044C YER175W-AQ8TGU4 54 aa3.53□□□□□ -1.84
OTU1YFL044C PHO2P07269 559 aa3.52□□□□□ -1.85
OTU1YFL044C CBF1P17106 351 aa3.52□□□□□ -1.85
OTU1YFL044C MXR2P25566 168 aa3.52□□□□□ -1.85
OTU1YFL044C PAP1P29468 568 aaKnown RBP3.52□□□□□ -1.85
OTU1YFL044C SUI1P32911 108 aaKnown RBP3.52□□□□□ -1.85
OTU1YFL044C UBC6P33296 250 aaPredicted RBP3.52□□□□□ -1.85
OTU1YFL044C AUR1P36107 401 aaPredicted RBP3.52□□□□□ -1.85
OTU1YFL044C ASC1P38011 319 aaKnown RBP3.52□□□□□ -1.85
OTU1YFL044C YBR139WP38109 508 aa3.52□□□□□ -1.85
OTU1YFL044C YEL057CP39983 233 aa3.52□□□□□ -1.85
OTU1YFL044C YEL020CP39994 560 aa3.52□□□□□ -1.85
OTU1YFL044C ICE2P40499 491 aa3.52□□□□□ -1.85
OTU1YFL044C APT1P49435 187 aaKnown RBP3.52□□□□□ -1.85
OTU1YFL044C GLO1P50107 326 aa3.52□□□□□ -1.85
OTU1YFL044C SHY1P53266 389 aa3.52□□□□□ -1.85
OTU1YFL044C YNL260CP53846 198 aa3.52□□□□□ -1.85
OTU1YFL044C EAF7P53911 425 aaKnown RBP3.52□□□□□ -1.85
OTU1YFL044C YNL058CP53947 316 aa3.52□□□□□ -1.85
OTU1YFL044C YDR209CQ03480 137 aa3.52□□□□□ -1.85
OTU1YFL044C URH1Q04179 340 aa3.52□□□□□ -1.85
OTU1YFL044C VTI1Q04338 217 aa3.52□□□□□ -1.85
OTU1YFL044C YMR027WQ04371 470 aa3.52□□□□□ -1.85
OTU1YFL044C YLR177WQ06251 628 aa3.52□□□□□ -1.85
OTU1YFL044C RIO1Q12196 484 aaKnown RBP3.52□□□□□ -1.85
OTU1YFL044C RUD3Q12234 484 aaKnown RBP3.52□□□□□ -1.85
OTU1YFL044C RGT2Q12300 763 aa3.52□□□□□ -1.85
OTU1YFL044C SPE4Q12455 300 aa3.52□□□□□ -1.85
OTU1YFL044C PAR32Q12515 295 aaKnown RBP3.52□□□□□ -1.85
OTU1YFL044C YOL159C-AQ3E769 90 aa3.52□□□□□ -1.85
OTU1YFL044C YBR255C-AQ3E776 120 aa3.52□□□□□ -1.85
OTU1YFL044C YOR032W-AQ8TGS1 66 aa3.52□□□□□ -1.85
OTU1YFL044C BPH1P25356 2167 aa3.52□□□□□ -1.85
OTU1YFL044C TPK2P06245 380 aa3.51□□□□□ -1.85
OTU1YFL044C CMD1P06787 147 aaKnown RBP3.51□□□□□ -1.85
OTU1YFL044C STE12P13574 688 aa3.51□□□□□ -1.85
OTU1YFL044C GCY1P14065 312 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
OTU1YFL044C HEM15P16622 393 aa3.51□□□□□ -1.85
OTU1YFL044C RPB4P20433 221 aaPredicted RBP3.51□□□□□ -1.85
OTU1YFL044C OCA4P25366 362 aa3.51□□□□□ -1.85
OTU1YFL044C PTM1P32857 523 aa3.51□□□□□ -1.85
OTU1YFL044C YPT10P38146 199 aa3.51□□□□□ -1.85
OTU1YFL044C APE4P38821 490 aa3.51□□□□□ -1.85
OTU1YFL044C UTP9P38882 575 aaKnown RBP3.51□□□□□ -1.85
OTU1YFL044C CCT2P39076 527 aaKnown RBP3.51□□□□□ -1.85
OTU1YFL044C VPS52P39904 641 aa3.51□□□□□ -1.85
OTU1YFL044C MIT1P40002 666 aa3.51□□□□□ -1.85
OTU1YFL044C SGN1P40561 250 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
OTU1YFL044C VMA13P41807 478 aaKnown RBP3.51□□□□□ -1.85
OTU1YFL044C RPS0BP46654 252 aaKnown RBP3.51□□□□□ -1.85
OTU1YFL044C BNA3P47039 444 aaKnown RBP3.51□□□□□ -1.85
OTU1YFL044C BIO3P50277 480 aa3.51□□□□□ -1.85
OTU1YFL044C ROG1P53118 685 aa3.51□□□□□ -1.85
OTU1YFL044C GIP3Q03016 1276 aa3.51□□□□□ -1.85
OTU1YFL044C YML119WQ03208 357 aa3.51□□□□□ -1.85
OTU1YFL044C RCF1Q03713 159 aa3.51□□□□□ -1.85
OTU1YFL044C GTB1Q04924 702 aa3.51□□□□□ -1.85
OTU1YFL044C BOP2Q06150 570 aa3.51□□□□□ -1.85
OTU1YFL044C YEH1Q07804 573 aa3.51□□□□□ -1.85
OTU1YFL044C UBX3Q12229 455 aa3.51□□□□□ -1.85
OTU1YFL044C YPR011CQ12251 326 aa3.51□□□□□ -1.85
OTU1YFL044C MDY2Q12285 212 aa3.51□□□□□ -1.85
OTU1YFL044C SRN2Q99176 213 aa3.51□□□□□ -1.85
OTU1YFL044C RPN13O13563 156 aa3.5□□□□□ -1.85
OTU1YFL044C YBR085C-AO43137 85 aa3.5□□□□□ -1.85
OTU1YFL044C HEM2P05373 342 aa3.5□□□□□ -1.85
OTU1YFL044C SPT3P06844 337 aa3.5□□□□□ -1.85
OTU1YFL044C COR1P07256 457 aa3.5□□□□□ -1.85
OTU1YFL044C AAD3P25612 363 aa3.5□□□□□ -1.85
OTU1YFL044C TOA1P32773 286 aa3.5□□□□□ -1.85
OTU1YFL044C CBF5P33322 483 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
OTU1YFL044C SDH3P33421 198 aa3.5□□□□□ -1.85
OTU1YFL044C HES1P35843 434 aa3.5□□□□□ -1.85
OTU1YFL044C SAP1P39955 897 aaKnown RBP3.5□□□□□ -1.85
OTU1YFL044C YIL166CP40445 542 aa3.5□□□□□ -1.85
OTU1YFL044C AZF1P41696 914 aa3.5□□□□□ -1.85
OTU1YFL044C QRI1P43123 477 aaKnown RBP3.5□□□□□ -1.85
OTU1YFL044C RPN14P53196 417 aa3.5□□□□□ -1.85
OTU1YFL044C APM1Q00776 475 aaPredicted RBP3.5□□□□□ -1.85
OTU1YFL044C YLR345WQ06137 509 aa3.5□□□□□ -1.85
OTU1YFL044C RAD34Q06665 692 aa3.5□□□□□ -1.85
OTU1YFL044C CRT10Q08226 957 aa3.5□□□□□ -1.85
OTU1YFL044C RRP40Q08285 240 aaKnown RBP3.5□□□□□ -1.85
OTU1YFL044C YOR376WQ08900 122 aa3.5□□□□□ -1.85
OTU1YFL044C YLR049CQ12110 428 aa3.5□□□□□ -1.85
OTU1YFL044C YOR097CQ12274 175 aaPredicted RBP3.5□□□□□ -1.85
OTU1YFL044C AHA1Q12449 350 aaKnown RBP3.5□□□□□ -1.85
OTU1YFL044C YMR030W-AQ3E760 96 aa3.5□□□□□ -1.85
OTU1YFL044C URA2P07259 2214 aaKnown RBP3.5□□□□□ -1.85
OTU1YFL044C AAC1P04710 309 aa3.49□□□□□ -1.85
OTU1YFL044C MSS116P15424 664 aaKnown RBP3.49□□□□□ -1.85
OTU1YFL044C SEC14P24280 304 aaKnown RBP3.49□□□□□ -1.85
OTU1YFL044C TRX3P25372 127 aa3.49□□□□□ -1.85
OTU1YFL044C SPB1P25582 841 aaPredicted RBP3.49□□□□□ -1.85
OTU1YFL044C STP22P25604 385 aa3.49□□□□□ -1.85
OTU1YFL044C OM14P38325 134 aa3.49□□□□□ -1.85
OTU1YFL044C CCT4P39078 528 aaKnown RBP3.49□□□□□ -1.85
OTU1YFL044C YJL068CP40363 299 aa3.49□□□□□ -1.85
OTU1YFL044C MET18P40469 1032 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms