RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C IFA38P38286 347 aa7.24□□□□□ -1.25
PUP3YER094C YHR097CP38809 366 aaKnown RBP7.24□□□□□ -1.25
PUP3YER094C SBE22P38814 852 aa7.24□□□□□ -1.25
PUP3YER094C RRG9P40156 214 aa7.24□□□□□ -1.25
PUP3YER094C GID8P40208 455 aa7.24□□□□□ -1.25
PUP3YER094C SOK1P40317 901 aa7.24□□□□□ -1.25
PUP3YER094C SWP82P43554 623 aa7.24□□□□□ -1.25
PUP3YER094C ASK10P48361 1146 aa7.24□□□□□ -1.25
PUP3YER094C SPT20P50875 604 aa7.24□□□□□ -1.25
PUP3YER094C SLD3P53135 668 aa7.24□□□□□ -1.25
PUP3YER094C DBP6P53734 629 aaKnown RBP7.24□□□□□ -1.25
PUP3YER094C INP1Q03694 420 aa7.24□□□□□ -1.25
PUP3YER094C ARV1Q06541 321 aa7.24□□□□□ -1.25
PUP3YER094C TEC1P18412 486 aa7.23□□□□□ -1.25
PUP3YER094C MKK2P32491 506 aa7.23□□□□□ -1.25
PUP3YER094C ARC19P33204 171 aaKnown RBP7.23□□□□□ -1.25
PUP3YER094C YLF2P38746 405 aa7.23□□□□□ -1.25
PUP3YER094C YHR219WP38900 624 aa7.23□□□□□ -1.25
PUP3YER094C UME6P39001 836 aa7.23□□□□□ -1.25
PUP3YER094C YTA6P40328 754 aa7.23□□□□□ -1.25
PUP3YER094C LEM3P42838 414 aa7.23□□□□□ -1.25
PUP3YER094C GCN20P43535 752 aaKnown RBP7.23□□□□□ -1.25
PUP3YER094C IMD4P50094 524 aaKnown RBP7.23□□□□□ -1.25
PUP3YER094C MAL11P53048 616 aa7.23□□□□□ -1.25
PUP3YER094C YAT1P80235 687 aa7.23□□□□□ -1.25
PUP3YER094C YSA1Q01976 231 aa7.23□□□□□ -1.25
PUP3YER094C YMD8Q03697 442 aa7.23□□□□□ -1.25
PUP3YER094C SKI7Q08491 747 aaPredicted RBP7.23□□□□□ -1.25
PUP3YER094C YDL211CQ12121 372 aa7.23□□□□□ -1.25
PUP3YER094C PSF1Q12488 208 aa7.23□□□□□ -1.25
PUP3YER094C YPL119C-AQ3E751 87 aa7.23□□□□□ -1.25
PUP3YER094C MED11Q99278 115 aa7.23□□□□□ -1.25
PUP3YER094C RPL20AP0CX23 172 aaKnown RBP7.22□□□□□ -1.25
PUP3YER094C RPL20BP0CX24 172 aaPredicted RBP7.22□□□□□ -1.25
PUP3YER094C TFS1P14306 219 aa7.22□□□□□ -1.25
PUP3YER094C SAM35P14693 329 aa7.22□□□□□ -1.25
PUP3YER094C CDC26P14724 124 aa7.22□□□□□ -1.25
PUP3YER094C TAL1P15019 335 aaKnown RBP7.22□□□□□ -1.25
PUP3YER094C GLK1P17709 500 aaKnown RBP7.22□□□□□ -1.25
PUP3YER094C ITR2P30606 609 aa7.22□□□□□ -1.25
PUP3YER094C FAA1P30624 700 aaKnown RBP7.22□□□□□ -1.25
PUP3YER094C PZF1P39933 429 aa7.22□□□□□ -1.25
PUP3YER094C ISC1P40015 477 aaKnown RBP7.22□□□□□ -1.25
PUP3YER094C SMK1P41808 388 aa7.22□□□□□ -1.25
PUP3YER094C YJR115WP47152 169 aa7.22□□□□□ -1.25
PUP3YER094C BAT2P47176 376 aaKnown RBP7.22□□□□□ -1.25
PUP3YER094C YGR067CP53243 804 aa7.22□□□□□ -1.25
PUP3YER094C YKR011CQ02209 353 aa7.22□□□□□ -1.25
PUP3YER094C YDR541CQ03049 344 aa7.22□□□□□ -1.25
PUP3YER094C ABZ2Q03266 374 aa7.22□□□□□ -1.25
PUP3YER094C NBA1Q08229 501 aaKnown RBP7.22□□□□□ -1.25
PUP3YER094C PST2Q12335 198 aaKnown RBP7.22□□□□□ -1.25
PUP3YER094C VCX1Q99385 411 aa7.22□□□□□ -1.25
PUP3YER094C CSF1Q12150 2958 aa7.22□□□□□ -1.25
PUP3YER094C KGD1P20967 1014 aaKnown RBP7.21□□□□□ -1.26
PUP3YER094C RPS5P26783 225 aaKnown RBP7.21□□□□□ -1.26
PUP3YER094C PMT2P31382 759 aa7.21□□□□□ -1.26
PUP3YER094C HIR2P32480 875 aa7.21□□□□□ -1.26
PUP3YER094C PRP19P32523 503 aaKnown RBP7.21□□□□□ -1.26
PUP3YER094C SEC61P32915 480 aa7.21□□□□□ -1.26
PUP3YER094C WBP1P33767 430 aaKnown RBP7.21□□□□□ -1.26
PUP3YER094C YKR015CP36111 568 aa7.21□□□□□ -1.26
PUP3YER094C ECM4P36156 370 aa7.21□□□□□ -1.26
PUP3YER094C GOS1P38736 223 aa7.21□□□□□ -1.26
PUP3YER094C ANS1P38832 159 aa7.21□□□□□ -1.26
PUP3YER094C SOP4P39543 234 aaPredicted RBP7.21□□□□□ -1.26
PUP3YER094C MBP1P39678 833 aa7.21□□□□□ -1.26
PUP3YER094C AST2P39945 430 aaKnown RBP7.21□□□□□ -1.26
PUP3YER094C AVT6P40074 448 aa7.21□□□□□ -1.26
PUP3YER094C CHA4P43634 648 aa7.21□□□□□ -1.26
PUP3YER094C GRX5Q02784 150 aa7.21□□□□□ -1.26
PUP3YER094C URC2Q04411 772 aa7.21□□□□□ -1.26
PUP3YER094C YLR345WQ06137 509 aa7.21□□□□□ -1.26
PUP3YER094C TPO4Q12256 659 aa7.21□□□□□ -1.26
PUP3YER094C AI1P03875 834 aa7.2□□□□□ -1.26
PUP3YER094C MET17P06106 444 aa7.2□□□□□ -1.26
PUP3YER094C HOM3P10869 527 aa7.2□□□□□ -1.26
PUP3YER094C SAC7P17121 654 aa7.2□□□□□ -1.26
PUP3YER094C SNF6P18888 332 aa7.2□□□□□ -1.26
PUP3YER094C IDP1P21954 428 aaKnown RBP7.2□□□□□ -1.26
PUP3YER094C VMA6P32366 345 aaKnown RBP7.2□□□□□ -1.26
PUP3YER094C LYP1P32487 611 aa7.2□□□□□ -1.26
PUP3YER094C RPS20P38701 121 aaKnown RBP7.2□□□□□ -1.26
PUP3YER094C IPT1P38954 527 aa7.2□□□□□ -1.26
PUP3YER094C SNO3P43544 222 aa7.2□□□□□ -1.26
PUP3YER094C RET2P43621 546 aa7.2□□□□□ -1.26
PUP3YER094C HMS2P47175 358 aa7.2□□□□□ -1.26
PUP3YER094C PMT3P47190 753 aa7.2□□□□□ -1.26
PUP3YER094C COS1P53822 381 aa7.2□□□□□ -1.26
PUP3YER094C SNZ1Q03148 297 aa7.2□□□□□ -1.26
PUP3YER094C YMR210WQ03649 449 aa7.2□□□□□ -1.26
PUP3YER094C BDS1Q08347 646 aa7.2□□□□□ -1.26
PUP3YER094C REX3Q12090 404 aa7.2□□□□□ -1.26
PUP3YER094C YGK3Q12222 375 aaPredicted RBP7.2□□□□□ -1.26
PUP3YER094C TRM10Q12400 293 aa7.2□□□□□ -1.26
PUP3YER094C PRP46Q12417 451 aaPredicted RBP7.2□□□□□ -1.26
PUP3YER094C YIL046W-AQ3E7Z4 54 aa7.2□□□□□ -1.26
PUP3YER094C CAR2P07991 424 aaKnown RBP7.19□□□□□ -1.26
PUP3YER094C BAR1P12630 587 aa7.19□□□□□ -1.26
PUP3YER094C NAR1P23503 491 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms