RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	AGC1	Q12482	902 aa		4.37	□□□□□ -1.71
TFB3	YDR460W	RMD5	Q12508	421 aa		4.37	□□□□□ -1.71
TFB3	YDR460W	SUS1	Q6WNK7	96 aa		4.37	□□□□□ -1.71
TFB3	YDR460W	SAS5	Q99314	248 aa		4.37	□□□□□ -1.71
TFB3	YDR460W	NUM1	Q00402	2748 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	TRP4	P07285	380 aa	Predicted RBP	4.36	□□□□□ -1.71
TFB3	YDR460W	SSA3	P09435	649 aa	Known RBP	4.36	□□□□□ -1.71
TFB3	YDR460W	MRP1	P10662	321 aa	Known RBP	4.36	□□□□□ -1.71
TFB3	YDR460W	NHP6A	P11632	93 aa	Known RBP	4.36	□□□□□ -1.71
TFB3	YDR460W	SEC62	P21825	274 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	MAG1	P22134	296 aa	Known RBP	4.36	□□□□□ -1.71
TFB3	YDR460W	RPL24B	P24000	155 aa	Known RBP	4.36	□□□□□ -1.71
TFB3	YDR460W	URA7	P28274	579 aa	Known RBP	4.36	□□□□□ -1.71
TFB3	YDR460W	MUD1	P32605	298 aa	Known RBP	4.36	□□□□□ -1.71
TFB3	YDR460W	RGT1	P32862	1170 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	MRPL6	P32904	214 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	DHR2	P36009	735 aa	Predicted RBP	4.36	□□□□□ -1.71
TFB3	YDR460W	SCO2	P38072	301 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	POA1	P38218	177 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	FIG1	P38224	298 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	TCM62	P38228	572 aa	Known RBP	4.36	□□□□□ -1.71
TFB3	YDR460W	ECM8	P38246	354 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	IST2	P38250	946 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	LSM5	P40089	93 aa	Known RBP	4.36	□□□□□ -1.71
TFB3	YDR460W	SLZ1	P40167	298 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	PCL7	P40186	285 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	TMA108	P40462	946 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	YIR035C	P40579	254 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	IMA5	P40884	581 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	CIN1	P40987	1014 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	CAF16	P43569	289 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	TOS3	P43637	560 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	MRX5	P47007	382 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	YGR153W	P48238	217 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	RPS12	P48589	143 aa	Known RBP	4.36	□□□□□ -1.71
TFB3	YDR460W	ALT2	P52892	507 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	TAD1	P53065	400 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	YGL204C	P53089	101 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	SPC98	P53540	846 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	BIO4	P53630	237 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	YNL134C	P53912	376 aa	Known RBP	4.36	□□□□□ -1.71
TFB3	YDR460W	SLM2	P53955	656 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	IDP3	P53982	420 aa	Known RBP	4.36	□□□□□ -1.71
TFB3	YDR460W	VPS9	P54787	451 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	ELP3	Q02908	557 aa	Known RBP	4.36	□□□□□ -1.71
TFB3	YDR460W	TRS31	Q03337	283 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	YML037C	Q03703	340 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	YLR173W	Q06247	608 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	YPR127W	Q06494	345 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	YDL086W	Q07505	273 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	TPO1	Q07824	586 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	PML1	Q07930	204 aa	Predicted RBP	4.36	□□□□□ -1.71
TFB3	YDR460W	TCO89	Q08921	799 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	RGT2	Q12300	763 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	YOP1	Q12402	180 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	PNS1	Q12412	539 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	RRD2	Q12461	358 aa		4.36	□□□□□ -1.71
TFB3	YDR460W	RPS9A	O13516	197 aa	Known RBP	4.35	□□□□□ -1.71
TFB3	YDR460W	CDC9	P04819	755 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	STE3	P06783	470 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	SPE1	P08432	466 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	ATP5	P09457	212 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	SNF6	P18888	332 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	PHO80	P20052	293 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	VBA3	P25594	458 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	MGT1	P26188	188 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	PPZ1	P26570	692 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	GSP1	P32835	219 aa	Known RBP	4.35	□□□□□ -1.71
TFB3	YDR460W	GSP2	P32836	220 aa	Known RBP	4.35	□□□□□ -1.71
TFB3	YDR460W	MTC2	P34246	357 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	YKL162C	P36052	402 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	RPF2	P36160	344 aa	Known RBP	4.35	□□□□□ -1.71
TFB3	YDR460W	MRPL4	P36517	319 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	APL3	P38065	1025 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	CHK1	P38147	527 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	SRO77	P38163	1010 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	MMS4	P38257	691 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	SHG1	P38337	142 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	SAW1	P39735	261 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	PIG2	P40187	538 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	YIL166C	P40445	542 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	TIR3	P40552	269 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	RPL10	P41805	221 aa	Known RBP	4.35	□□□□□ -1.71
TFB3	YDR460W	MTR3	P48240	250 aa	Predicted RBP	4.35	□□□□□ -1.71
TFB3	YDR460W	LYS20	P48570	428 aa	Known RBP	4.35	□□□□□ -1.71
TFB3	YDR460W	PHB2	P50085	310 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	PEX8	P53248	589 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	GND2	P53319	492 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	YNL181W	P53878	407 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	LSM7	P53905	115 aa	Known RBP	4.35	□□□□□ -1.71
TFB3	YDR460W	YAT1	P80235	687 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	MTD1	Q02046	320 aa	Known RBP	4.35	□□□□□ -1.71
TFB3	YDR460W	YKR011C	Q02209	353 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	MRP51	Q02950	344 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	YPL113C	Q02961	396 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	DIG2	Q03373	323 aa	Known RBP	4.35	□□□□□ -1.71
TFB3	YDR460W	SKY1	Q03656	742 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	YDR132C	Q03900	495 aa		4.35	□□□□□ -1.71
TFB3	YDR460W	LRS4	Q04087	347 aa	Known RBP	4.35	□□□□□ -1.71
TFB3	YDR460W	NHX1	Q04121	633 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms