RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	RPA34	P47006	233 aa	Predicted RBP	3.88	□□□□□ -1.79
NSE3	YDR288W	ATP22	P50273	684 aa	Predicted RBP	3.88	□□□□□ -1.79
NSE3	YDR288W	AQR1	P53943	586 aa		3.88	□□□□□ -1.79
NSE3	YDR288W	NOP6	Q07623	225 aa	Known RBP	3.88	□□□□□ -1.79
NSE3	YDR288W	NBL1	Q3E7Y6	73 aa		3.88	□□□□□ -1.79
NSE3	YDR288W	SMI1	P32566	505 aa		3.87	□□□□□ -1.79
NSE3	YDR288W	TOA2	P32774	122 aa		3.87	□□□□□ -1.79
NSE3	YDR288W	CAJ1	P39101	391 aa		3.87	□□□□□ -1.79
NSE3	YDR288W	MIG3	P39943	394 aa		3.87	□□□□□ -1.79
NSE3	YDR288W	SEC9	P40357	651 aa		3.87	□□□□□ -1.79
NSE3	YDR288W	UTP18	P40362	594 aa	Predicted RBP	3.87	□□□□□ -1.79
NSE3	YDR288W	DFG10	P40526	253 aa		3.87	□□□□□ -1.79
NSE3	YDR288W	CUE3	P53137	624 aa	Known RBP	3.87	□□□□□ -1.79
NSE3	YDR288W	DBP9	Q06218	594 aa	Known RBP	3.87	□□□□□ -1.79
NSE3	YDR288W	YDL114W	Q07530	308 aa		3.87	□□□□□ -1.79
NSE3	YDR288W	SHS1	Q07657	551 aa		3.87	□□□□□ -1.79
NSE3	YDR288W	HMS1	Q12398	434 aa		3.87	□□□□□ -1.79
NSE3	YDR288W	NAG1	Q8TGN9	163 aa		3.87	□□□□□ -1.79
NSE3	YDR288W	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	not detected
NSE3	YDR288W	EFB1	P32471	206 aa	Known RBP	3.86	□□□□□ -1.79
NSE3	YDR288W	NUP2	P32499	720 aa		3.86	□□□□□ -1.79
NSE3	YDR288W	SIF2	P38262	535 aa		3.86	□□□□□ -1.79
NSE3	YDR288W	GAB1	P41733	394 aa		3.86	□□□□□ -1.79
NSE3	YDR288W	AIP1	P46680	615 aa	Known RBP	3.86	□□□□□ -1.79
NSE3	YDR288W	YMR310C	Q04867	317 aa	Predicted RBP	3.86	□□□□□ -1.79
NSE3	YDR288W	YOR338W	Q99326	363 aa		3.86	□□□□□ -1.79
NSE3	YDR288W	FSH3	Q99369	266 aa		3.86	□□□□□ -1.79
NSE3	YDR288W	THR4	P16120	514 aa	Known RBP	3.85	□□□□□ -1.79
NSE3	YDR288W	DBR1	P24309	405 aa	Known RBP	3.85	□□□□□ -1.79
NSE3	YDR288W	RDS1	P25611	832 aa		3.85	□□□□□ -1.79
NSE3	YDR288W	YIL089W	P40500	205 aa		3.85	□□□□□ -1.79
NSE3	YDR288W	ATG18	P43601	500 aa		3.85	□□□□□ -1.79
NSE3	YDR288W	YGL039W	P53183	348 aa	Known RBP	3.85	□□□□□ -1.79
NSE3	YDR288W	YGR016W	P53209	190 aa		3.85	□□□□□ -1.79
NSE3	YDR288W	RET3	P53600	189 aa		3.85	□□□□□ -1.79
NSE3	YDR288W	PRM1	P53835	661 aa		3.85	□□□□□ -1.79
NSE3	YDR288W	YNL143C	P53908	130 aa		3.85	□□□□□ -1.79
NSE3	YDR288W	REX2	P54964	269 aa	Known RBP	3.85	□□□□□ -1.79
NSE3	YDR288W	UTP6	Q02354	440 aa	Known RBP	3.85	□□□□□ -1.79
NSE3	YDR288W	MHR1	Q06630	226 aa		3.85	□□□□□ -1.79
NSE3	YDR288W	MAS1	P10507	462 aa		3.84	□□□□□ -1.79
NSE3	YDR288W	SSE1	P32589	693 aa	Known RBP	3.84	□□□□□ -1.79
NSE3	YDR288W	SPO23	P33757	523 aa		3.84	□□□□□ -1.79
NSE3	YDR288W	YHR182W	P38870	785 aa		3.84	□□□□□ -1.79
NSE3	YDR288W	TRF5	P48561	642 aa	Known RBP	3.84	□□□□□ -1.79
NSE3	YDR288W	BNS1	P50084	137 aa		3.84	□□□□□ -1.79
NSE3	YDR288W	ADD37	Q03233	198 aa		3.84	□□□□□ -1.79
NSE3	YDR288W	YET2	Q04210	160 aa		3.84	□□□□□ -1.79
NSE3	YDR288W	YDL199C	Q12407	687 aa		3.84	□□□□□ -1.79
NSE3	YDR288W	STE3	P06783	470 aa		3.83	□□□□□ -1.8
NSE3	YDR288W	MAS2	P11914	482 aa		3.83	□□□□□ -1.8
NSE3	YDR288W	RPL16A	P26784	199 aa	Known RBP	3.83	□□□□□ -1.8
NSE3	YDR288W	FUN26	P31381	517 aa		3.83	□□□□□ -1.8
NSE3	YDR288W	HMX1	P32339	317 aa		3.83	□□□□□ -1.8
NSE3	YDR288W	HXT1	P32465	570 aa		3.83	□□□□□ -1.8
NSE3	YDR288W	PTK1	P36002	662 aa	Predicted RBP	3.83	□□□□□ -1.8
NSE3	YDR288W	ABM1	P47146	123 aa		3.83	□□□□□ -1.8
NSE3	YDR288W	CWC22	P53333	577 aa	Known RBP	3.83	□□□□□ -1.8
NSE3	YDR288W	YLR152C	P54072	576 aa		3.83	□□□□□ -1.8
NSE3	YDR288W	AIM33	Q04516	312 aa		3.83	□□□□□ -1.8
NSE3	YDR288W	RPS18A	P0CX55	146 aa	Known RBP	3.82	□□□□□ -1.8
NSE3	YDR288W	RPS18B	P0CX56	146 aa	Predicted RBP	3.82	□□□□□ -1.8
NSE3	YDR288W	TAL1	P15019	335 aa	Known RBP	3.82	□□□□□ -1.8
NSE3	YDR288W	CDC50	P25656	391 aa		3.82	□□□□□ -1.8
NSE3	YDR288W	IES6	P32617	166 aa		3.82	□□□□□ -1.8
NSE3	YDR288W	ANR2	P36090	516 aa	Predicted RBP	3.82	□□□□□ -1.8
NSE3	YDR288W	HAL1	Q01766	294 aa		3.82	□□□□□ -1.8
NSE3	YDR288W	YDR286C	Q05530	114 aa		3.82	□□□□□ -1.8
NSE3	YDR288W	ARR1	Q06596	294 aa		3.82	□□□□□ -1.8
NSE3	YDR288W	MFG1	Q07684	458 aa		3.82	□□□□□ -1.8
NSE3	YDR288W	GAT3	Q07928	141 aa		3.82	□□□□□ -1.8
NSE3	YDR288W	PML1	Q07930	204 aa	Predicted RBP	3.82	□□□□□ -1.8
NSE3	YDR288W	YOL075C	Q08234	1294 aa		3.82	□□□□□ -1.8
NSE3	YDR288W	PCL1	P24867	279 aa		3.81	□□□□□ -1.8
NSE3	YDR288W	BAT1	P38891	393 aa	Known RBP	3.81	□□□□□ -1.8
NSE3	YDR288W	PTI1	P39927	425 aa	Predicted RBP	3.81	□□□□□ -1.8
NSE3	YDR288W	YER186C	P40101	306 aa		3.81	□□□□□ -1.8
NSE3	YDR288W	TIS11	P47977	285 aa		3.81	□□□□□ -1.8
NSE3	YDR288W	SMP3	Q04174	516 aa		3.81	□□□□□ -1.8
NSE3	YDR288W	YOR012W	Q12351	137 aa		3.81	□□□□□ -1.8
NSE3	YDR288W	TRX1	P22217	103 aa	Known RBP	3.8	□□□□□ -1.8
NSE3	YDR288W	SPR1	P32603	445 aa		3.8	□□□□□ -1.8
NSE3	YDR288W	YEL043W	P32618	956 aa		3.8	□□□□□ -1.8
NSE3	YDR288W	UIP5	P36137	443 aa		3.8	□□□□□ -1.8
NSE3	YDR288W	LSM12	P38828	187 aa	Known RBP	3.8	□□□□□ -1.8
NSE3	YDR288W	PFS1	P38872	237 aa		3.8	□□□□□ -1.8
NSE3	YDR288W	YJR030C	P47101	745 aa		3.8	□□□□□ -1.8
NSE3	YDR288W	HST1	P53685	503 aa		3.8	□□□□□ -1.8
NSE3	YDR288W	SKI8	Q02793	397 aa	Predicted RBP	3.8	□□□□□ -1.8
NSE3	YDR288W	YLH47	Q06493	454 aa		3.8	□□□□□ -1.8
NSE3	YDR288W	YPR078C	Q06813	372 aa		3.8	□□□□□ -1.8
NSE3	YDR288W	PGC1	Q08959	321 aa		3.8	□□□□□ -1.8
NSE3	YDR288W	SFG1	Q12507	346 aa		3.8	□□□□□ -1.8
NSE3	YDR288W	SAG1	P20840	650 aa		3.79	□□□□□ -1.8
NSE3	YDR288W	ANP1	P32629	500 aa		3.79	□□□□□ -1.8
NSE3	YDR288W	VAM7	P32912	316 aa		3.79	□□□□□ -1.8
NSE3	YDR288W	UTH1	P36135	365 aa		3.79	□□□□□ -1.8
NSE3	YDR288W	OM14	P38325	134 aa		3.79	□□□□□ -1.8
NSE3	YDR288W	LCP5	P40079	357 aa	Predicted RBP	3.79	□□□□□ -1.8
NSE3	YDR288W	PDR16	P53860	351 aa	Known RBP	3.79	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms