RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W LDB17Q12342 491 aa2.32□□□□□ -2.04
VPS41YDR080W YLR462WO13556 202 aa2.31□□□□□ -2.04
VPS41YDR080W LEU4P06208 619 aaKnown RBP2.31□□□□□ -2.04
VPS41YDR080W YCK1P23291 538 aa2.31□□□□□ -2.04
VPS41YDR080W YGP1P38616 354 aaKnown RBP2.31□□□□□ -2.04
VPS41YDR080W YHL049CP38722 271 aa2.31□□□□□ -2.04
VPS41YDR080W MET30P39014 640 aa2.31□□□□□ -2.04
VPS41YDR080W PCL6P40038 420 aa2.31□□□□□ -2.04
VPS41YDR080W YFL064CP43540 174 aa2.31□□□□□ -2.04
VPS41YDR080W BTN2P53286 410 aa2.31□□□□□ -2.04
VPS41YDR080W VPS75P53853 264 aa2.31□□□□□ -2.04
VPS41YDR080W SLT2Q00772 484 aa2.31□□□□□ -2.04
VPS41YDR080W AAT1Q01802 451 aa2.31□□□□□ -2.04
VPS41YDR080W MTG1Q03151 367 aaPredicted RBP2.31□□□□□ -2.04
VPS41YDR080W VMS1Q04311 632 aaKnown RBP2.31□□□□□ -2.04
VPS41YDR080W HRI1Q05905 244 aaKnown RBP2.31□□□□□ -2.04
VPS41YDR080W ATG23Q06671 453 aa2.31□□□□□ -2.04
VPS41YDR080W BAG7Q12128 409 aa2.31□□□□□ -2.04
VPS41YDR080W SPO24Q3E752 67 aa2.31□□□□□ -2.04
VPS41YDR080W YBL111CQ3E7Y5 667 aa2.31□□□□□ -2.04
VPS41YDR080W MTR10Q99189 972 aa2.31□□□□□ -2.04
VPS41YDR080W SPB1P25582 841 aaPredicted RBP2.31□□□□□ -2.04
VPS41YDR080W YCR099CP25657 155 aa2.31□□□□□ -2.04
VPS41YDR080W PTP2P29461 750 aa2.31□□□□□ -2.04
VPS41YDR080W MTR2P34232 184 aaKnown RBP2.31□□□□□ -2.04
VPS41YDR080W DTR1P38125 572 aa2.31□□□□□ -2.04
VPS41YDR080W END3P39013 349 aa2.31□□□□□ -2.04
VPS41YDR080W PRE6P40303 254 aaKnown RBP2.31□□□□□ -2.04
VPS41YDR080W ECO1P43605 281 aa2.31□□□□□ -2.04
VPS41YDR080W LSM3P57743 89 aaKnown RBP2.31□□□□□ -2.04
VPS41YDR080W ATG21Q02887 496 aa2.31□□□□□ -2.04
VPS41YDR080W GIP3Q03016 1276 aa2.31□□□□□ -2.04
VPS41YDR080W IZH1Q03419 316 aa2.31□□□□□ -2.04
VPS41YDR080W RNH1Q04740 348 aa2.31□□□□□ -2.04
VPS41YDR080W YDL211CQ12121 372 aa2.31□□□□□ -2.04
VPS41YDR080W NCE102Q12207 173 aaRIP-Chip data2.31□□□□□ -2.04not detected
VPS41YDR080W PST1Q12355 444 aa2.31□□□□□ -2.04
VPS41YDR080W CYR1P08678 2026 aaKnown RBP2.31□□□□□ -2.04
VPS41YDR080W CDC23P16522 626 aa2.31□□□□□ -2.04
VPS41YDR080W SPO12P17123 173 aa2.31□□□□□ -2.04
VPS41YDR080W ERG1P32476 496 aaKnown RBP2.31□□□□□ -2.04
VPS41YDR080W SUI1P32911 108 aaKnown RBP2.31□□□□□ -2.04
VPS41YDR080W VRG4P40107 337 aa2.31□□□□□ -2.04
VPS41YDR080W BNA1P47096 177 aa2.31□□□□□ -2.04
VPS41YDR080W INN1P53901 409 aa2.31□□□□□ -2.04
VPS41YDR080W YOR019WQ99248 730 aa2.31□□□□□ -2.04
VPS41YDR080W ATP4P05626 244 aa2.3□□□□□ -2.04
VPS41YDR080W TY2A-LR1P0C2J4 438 aa2.3□□□□□ -2.04
VPS41YDR080W TY2A-FP0CX61 438 aa2.3□□□□□ -2.04
VPS41YDR080W TY2A-GR2P0CX62 438 aa2.3□□□□□ -2.04
VPS41YDR080W CHA1P25379 360 aaKnown RBP2.3□□□□□ -2.04
VPS41YDR080W TY2A-CP25383 438 aa2.3□□□□□ -2.04
VPS41YDR080W MXR2P25566 168 aa2.3□□□□□ -2.04
VPS41YDR080W URA10P30402 227 aa2.3□□□□□ -2.04
VPS41YDR080W OM14P38325 134 aa2.3□□□□□ -2.04
VPS41YDR080W INM1P38710 295 aa2.3□□□□□ -2.04
VPS41YDR080W NPT1P39683 429 aaKnown RBP2.3□□□□□ -2.04
VPS41YDR080W GDS1P41913 522 aa2.3□□□□□ -2.04
VPS41YDR080W SHY1P53266 389 aa2.3□□□□□ -2.04
VPS41YDR080W PFA5Q03289 374 aa2.3□□□□□ -2.04
VPS41YDR080W TY2A-DR2Q03483 438 aa2.3□□□□□ -2.04
VPS41YDR080W CDC123Q05791 360 aa2.3□□□□□ -2.04
VPS41YDR080W PML1Q07930 204 aaPredicted RBP2.3□□□□□ -2.04
VPS41YDR080W CUE5Q08412 411 aaKnown RBP2.3□□□□□ -2.04
VPS41YDR080W MMT2Q08970 484 aa2.3□□□□□ -2.04
VPS41YDR080W TY2A-BQ12260 438 aa2.3□□□□□ -2.04
VPS41YDR080W TY2A-OR2Q12293 438 aa2.3□□□□□ -2.04
VPS41YDR080W TY2A-DR1Q12392 438 aa2.3□□□□□ -2.04
VPS41YDR080W TY2A-OR1Q12439 438 aa2.3□□□□□ -2.04
VPS41YDR080W YMR230W-AQ3E7B5 62 aa2.3□□□□□ -2.04
VPS41YDR080W TY2A-DR3Q99303 438 aa2.3□□□□□ -2.04
VPS41YDR080W Q0297Q9ZZV8 51 aa2.3□□□□□ -2.04
VPS41YDR080W ARD1P07347 238 aaPredicted RBP2.3□□□□□ -2.04
VPS41YDR080W CBS2P14905 389 aa2.3□□□□□ -2.04
VPS41YDR080W PBN1P25580 416 aa2.3□□□□□ -2.04
VPS41YDR080W CRM1P30822 1084 aaKnown RBP2.3□□□□□ -2.04
VPS41YDR080W ATS1P31386 333 aa2.3□□□□□ -2.04
VPS41YDR080W RPN12P32496 274 aa2.3□□□□□ -2.04
VPS41YDR080W VPS24P36095 224 aaKnown RBP2.3□□□□□ -2.04
VPS41YDR080W YHL037CP38733 133 aa2.3□□□□□ -2.04
VPS41YDR080W TCD1P38756 429 aa2.3□□□□□ -2.04
VPS41YDR080W LCP5P40079 357 aaPredicted RBP2.3□□□□□ -2.04
VPS41YDR080W YMR134WP40207 237 aa2.3□□□□□ -2.04
VPS41YDR080W YIL169CP40442 995 aa2.3□□□□□ -2.04
VPS41YDR080W ALB1P47019 175 aaPredicted RBP2.3□□□□□ -2.04
VPS41YDR080W BRO1P48582 844 aa2.3□□□□□ -2.04
VPS41YDR080W BIO3P50277 480 aa2.3□□□□□ -2.04
VPS41YDR080W OAZ1Q02803 292 aa2.3□□□□□ -2.04
VPS41YDR080W CGI121Q03705 181 aaKnown RBP2.3□□□□□ -2.04
VPS41YDR080W YTH1Q06102 208 aaPredicted RBP2.3□□□□□ -2.04
VPS41YDR080W YPR174CQ06616 221 aaPredicted RBP2.3□□□□□ -2.04
VPS41YDR080W UTP20P35194 2493 aaKnown RBP2.29□□□□□ -2.04
VPS41YDR080W ARG4P04076 463 aaPredicted RBP2.29□□□□□ -2.04
VPS41YDR080W YML002WP0CF17 737 aa2.29□□□□□ -2.04
VPS41YDR080W MSS116P15424 664 aaKnown RBP2.29□□□□□ -2.04
VPS41YDR080W YCL068CP25593 260 aa2.29□□□□□ -2.04
VPS41YDR080W APE4P38821 490 aa2.29□□□□□ -2.04
VPS41YDR080W APQ12P40532 138 aa2.29□□□□□ -2.04
VPS41YDR080W DJP1P40564 432 aa2.29□□□□□ -2.04
VPS41YDR080W EMC2P47133 292 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms