RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C ATG15P25641 520 aa6.74□□□□□ -1.33
CDC13YDL220C COQ3P27680 312 aa6.74□□□□□ -1.33
CDC13YDL220C MOT2P34909 587 aaKnown RBP6.74□□□□□ -1.33
CDC13YDL220C GPT2P36148 743 aa6.74□□□□□ -1.33
CDC13YDL220C YBR241CP38142 488 aa6.74□□□□□ -1.33
CDC13YDL220C ATG8P38182 117 aaRIP-Chip data6.74□□□□□ -1.33not detected
CDC13YDL220C DHH1P39517 506 aaKnown RBP6.74□□□□□ -1.33
CDC13YDL220C NPR2P39923 615 aa6.74□□□□□ -1.33
CDC13YDL220C HAT2P39984 401 aa6.74□□□□□ -1.33
CDC13YDL220C UTP7P40055 554 aaKnown RBP6.74□□□□□ -1.33
CDC13YDL220C YJR154WP47181 346 aa6.74□□□□□ -1.33
CDC13YDL220C YDL183CP48569 320 aa6.74□□□□□ -1.33
CDC13YDL220C NBP35P52920 328 aa6.74□□□□□ -1.33
CDC13YDL220C NSA1P53136 463 aaPredicted RBP6.74□□□□□ -1.33
CDC13YDL220C ATF2P53296 535 aa6.74□□□□□ -1.33
CDC13YDL220C TDA1Q03533 586 aa6.74□□□□□ -1.33
CDC13YDL220C CDC123Q05791 360 aa6.74□□□□□ -1.33
CDC13YDL220C SRO7Q12038 1033 aa6.74□□□□□ -1.33
CDC13YDL220C SPS2P08459 502 aa6.73□□□□□ -1.33
CDC13YDL220C PDX1P16451 410 aa6.73□□□□□ -1.33
CDC13YDL220C AFT1P22149 690 aa6.73□□□□□ -1.33
CDC13YDL220C MBA1P38300 278 aa6.73□□□□□ -1.33
CDC13YDL220C ARN1P38731 627 aa6.73□□□□□ -1.33
CDC13YDL220C FAD1P38913 306 aa6.73□□□□□ -1.33
CDC13YDL220C ASK10P48361 1146 aa6.73□□□□□ -1.33
CDC13YDL220C RPN14P53196 417 aa6.73□□□□□ -1.33
CDC13YDL220C YGR168CP53293 376 aa6.73□□□□□ -1.33
CDC13YDL220C YNR066CP53752 436 aa6.73□□□□□ -1.33
CDC13YDL220C SKY1Q03656 742 aa6.73□□□□□ -1.33
CDC13YDL220C YAP6Q03935 383 aa6.73□□□□□ -1.33
CDC13YDL220C TVP18Q04767 167 aa6.73□□□□□ -1.33
CDC13YDL220C HOF1Q05080 669 aa6.73□□□□□ -1.33
CDC13YDL220C PST2Q12335 198 aaKnown RBP6.73□□□□□ -1.33
CDC13YDL220C MTR10Q99189 972 aa6.73□□□□□ -1.33
CDC13YDL220C YEL076C-AP0CX16 216 aa6.73□□□□□ -1.33
CDC13YDL220C YLR464WP0CX17 216 aa6.73□□□□□ -1.33
CDC13YDL220C ASP3-2P0CX77 362 aa6.73□□□□□ -1.33
CDC13YDL220C ASP3-3P0CX78 362 aa6.73□□□□□ -1.33
CDC13YDL220C ASP3-4P0CX79 362 aa6.73□□□□□ -1.33
CDC13YDL220C ASP3-1P0CZ17 362 aa6.73□□□□□ -1.33
CDC13YDL220C MNE1P24720 663 aa6.73□□□□□ -1.33
CDC13YDL220C PRP45P28004 379 aaPredicted RBP6.73□□□□□ -1.33
CDC13YDL220C MSN2P33748 704 aa6.73□□□□□ -1.33
CDC13YDL220C MRPL4P36517 319 aa6.73□□□□□ -1.33
CDC13YDL220C YEL076CP39971 216 aa6.73□□□□□ -1.33
CDC13YDL220C ARF3P40994 183 aaRIP-Chip data6.73□□□□□ -1.33not detected
CDC13YDL220C GLC8P41818 229 aa6.73□□□□□ -1.33
CDC13YDL220C TAD2P47058 250 aa6.73□□□□□ -1.33
CDC13YDL220C COG7P53195 279 aa6.73□□□□□ -1.33
CDC13YDL220C MRP51Q02950 344 aa6.73□□□□□ -1.33
CDC13YDL220C INP54Q08227 384 aaKnown RBP6.73□□□□□ -1.33
CDC13YDL220C INP53Q12271 1107 aa6.73□□□□□ -1.33
CDC13YDL220C PFK27Q12471 397 aaPredicted RBP6.73□□□□□ -1.33
CDC13YDL220C MHT1Q12525 324 aa6.73□□□□□ -1.33
CDC13YDL220C SUS1Q6WNK7 96 aa6.73□□□□□ -1.33
CDC13YDL220C ALG7P07286 448 aa6.72□□□□□ -1.33
CDC13YDL220C MAG1P22134 296 aaKnown RBP6.72□□□□□ -1.33
CDC13YDL220C RPI1P23250 407 aaKnown RBP6.72□□□□□ -1.33
CDC13YDL220C GRR1P24814 1151 aa6.72□□□□□ -1.33
CDC13YDL220C IDH1P28834 360 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
CDC13YDL220C SKT5P34226 696 aa6.72□□□□□ -1.33
CDC13YDL220C RCR1P38212 213 aa6.72□□□□□ -1.33
CDC13YDL220C MET28P40573 187 aa6.72□□□□□ -1.33
CDC13YDL220C ALK1P43633 760 aaKnown RBP6.72□□□□□ -1.33
CDC13YDL220C YGL159WP53110 370 aa6.72□□□□□ -1.33
CDC13YDL220C ALG12P53730 551 aa6.72□□□□□ -1.33
CDC13YDL220C RKM2Q03942 479 aa6.72□□□□□ -1.33
CDC13YDL220C SHH3Q04487 196 aa6.72□□□□□ -1.33
CDC13YDL220C GPI11Q06636 219 aa6.72□□□□□ -1.33
CDC13YDL220C YDL057WQ07379 328 aa6.72□□□□□ -1.33
CDC13YDL220C YPL257WQ08974 193 aa6.72□□□□□ -1.33
CDC13YDL220C EFG1Q3E705 233 aaKnown RBP6.72□□□□□ -1.33
CDC13YDL220C VMA9Q3E7B6 73 aa6.72□□□□□ -1.33
CDC13YDL220C FSH3Q99369 266 aa6.72□□□□□ -1.33
CDC13YDL220C CYC1P00044 109 aaPredicted RBP6.72□□□□□ -1.33
CDC13YDL220C TFA2P36145 328 aa6.72□□□□□ -1.33
CDC13YDL220C YBR220CP38318 560 aa6.72□□□□□ -1.33
CDC13YDL220C FMO1P38866 432 aa6.72□□□□□ -1.33
CDC13YDL220C AFG3P39925 761 aa6.72□□□□□ -1.33
CDC13YDL220C HPA3P39979 161 aa6.72□□□□□ -1.33
CDC13YDL220C GLR1P41921 483 aaKnown RBP6.72□□□□□ -1.33
CDC13YDL220C YAE1P47118 141 aaPredicted RBP6.72□□□□□ -1.33
CDC13YDL220C GUP1P53154 560 aa6.72□□□□□ -1.33
CDC13YDL220C SSU72P53538 206 aaPredicted RBP6.72□□□□□ -1.33
CDC13YDL220C YPL067CQ02754 198 aa6.72□□□□□ -1.33
CDC13YDL220C TRS31Q03337 283 aa6.72□□□□□ -1.33
CDC13YDL220C PRM6Q04705 352 aa6.72□□□□□ -1.33
CDC13YDL220C SKG3Q06315 1026 aa6.72□□□□□ -1.33
CDC13YDL220C HRD1Q08109 551 aa6.72□□□□□ -1.33
CDC13YDL220C YDR018CQ12185 396 aa6.72□□□□□ -1.33
CDC13YDL220C YLR046CQ12253 270 aa6.72□□□□□ -1.33
CDC13YDL220C YOP1Q12402 180 aa6.72□□□□□ -1.33
CDC13YDL220C YCR102CP25608 368 aa6.71□□□□□ -1.33
CDC13YDL220C NTH1P32356 751 aa6.71□□□□□ -1.33
CDC13YDL220C AEP1P32493 518 aa6.71□□□□□ -1.33
CDC13YDL220C YBL029WP38201 376 aa6.71□□□□□ -1.33
CDC13YDL220C SUR2P38992 349 aa6.71□□□□□ -1.33
CDC13YDL220C YAR1P46683 200 aa6.71□□□□□ -1.33
CDC13YDL220C SSY5P47002 699 aa6.71□□□□□ -1.33
CDC13YDL220C PUS4P48567 403 aaKnown RBP6.71□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms