RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A STV1P37296 890 aa2.19□□□□□ -2.06
VMA9YCL005W-A PDX3P38075 228 aaKnown RBP2.19□□□□□ -2.06
VMA9YCL005W-A YBR056WP38081 501 aa2.19□□□□□ -2.06
VMA9YCL005W-A ECM31P38122 312 aa2.19□□□□□ -2.06
VMA9YCL005W-A RXT2P38255 430 aa2.19□□□□□ -2.06
VMA9YCL005W-A SIF2P38262 535 aa2.19□□□□□ -2.06
VMA9YCL005W-A MSG5P38590 489 aa2.19□□□□□ -2.06
VMA9YCL005W-A PRS2P38620 318 aaKnown RBP2.19□□□□□ -2.06
VMA9YCL005W-A MMS21P38632 267 aa2.19□□□□□ -2.06
VMA9YCL005W-A SBE22P38814 852 aa2.19□□□□□ -2.06
VMA9YCL005W-A CYC2P38909 366 aa2.19□□□□□ -2.06
VMA9YCL005W-A END3P39013 349 aa2.19□□□□□ -2.06
VMA9YCL005W-A PES4P39684 611 aa2.19□□□□□ -2.06
VMA9YCL005W-A YER184CP39961 794 aa2.19□□□□□ -2.06
VMA9YCL005W-A EDC3P39998 551 aaKnown RBP2.19□□□□□ -2.06
VMA9YCL005W-A GIM4P40005 111 aaKnown RBP2.19□□□□□ -2.06
VMA9YCL005W-A TPA1P40032 644 aaKnown RBP2.19□□□□□ -2.06
VMA9YCL005W-A LSM5P40089 93 aaKnown RBP2.19□□□□□ -2.06
VMA9YCL005W-A YJR061WP40355 935 aa2.19□□□□□ -2.06
VMA9YCL005W-A GLC8P41818 229 aa2.19□□□□□ -2.06
VMA9YCL005W-A LOC1P43586 204 aaPredicted RBP2.19□□□□□ -2.06
VMA9YCL005W-A GUF1P46943 645 aa2.19□□□□□ -2.06
VMA9YCL005W-A IRC8P47046 822 aa2.19□□□□□ -2.06
VMA9YCL005W-A HOC1P47124 396 aa2.19□□□□□ -2.06
VMA9YCL005W-A GTO1P48239 356 aa2.19□□□□□ -2.06
VMA9YCL005W-A HSH155P49955 971 aaKnown RBP2.19□□□□□ -2.06
VMA9YCL005W-A YGL036WP53185 909 aaPredicted RBP2.19□□□□□ -2.06
VMA9YCL005W-A TWF1P53250 332 aa2.19□□□□□ -2.06
VMA9YCL005W-A OKP1P53298 406 aa2.19□□□□□ -2.06
VMA9YCL005W-A MEP3P53390 489 aa2.19□□□□□ -2.06
VMA9YCL005W-A YNR062CP53748 327 aa2.19□□□□□ -2.06
VMA9YCL005W-A CUS2P53830 285 aaPredicted RBP2.19□□□□□ -2.06
VMA9YCL005W-A NOP13P53883 403 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
VMA9YCL005W-A YNL095CP53932 642 aa2.19□□□□□ -2.06
VMA9YCL005W-A SLM2P53955 656 aa2.19□□□□□ -2.06
VMA9YCL005W-A IDP3P53982 420 aaKnown RBP2.19□□□□□ -2.06
VMA9YCL005W-A MAK10Q02197 733 aa2.19□□□□□ -2.06
VMA9YCL005W-A OSH6Q02201 448 aa2.19□□□□□ -2.06
VMA9YCL005W-A YPL068CQ02749 293 aa2.19□□□□□ -2.06
VMA9YCL005W-A PEX25Q02969 394 aa2.19□□□□□ -2.06
VMA9YCL005W-A RMT2Q03305 412 aa2.19□□□□□ -2.06
VMA9YCL005W-A RSN1Q03516 953 aa2.19□□□□□ -2.06
VMA9YCL005W-A ENT5Q03769 411 aaKnown RBP2.19□□□□□ -2.06
VMA9YCL005W-A ARX1Q03862 593 aaKnown RBP2.19□□□□□ -2.06
VMA9YCL005W-A SWF1Q04629 336 aa2.19□□□□□ -2.06
VMA9YCL005W-A PRM6Q04705 352 aa2.19□□□□□ -2.06
VMA9YCL005W-A DIB1Q06819 143 aaPredicted RBP2.19□□□□□ -2.06
VMA9YCL005W-A YET3Q07451 203 aa2.19□□□□□ -2.06
VMA9YCL005W-A AEP3Q12089 606 aa2.19□□□□□ -2.06
VMA9YCL005W-A SWT1Q12104 458 aa2.19□□□□□ -2.06
VMA9YCL005W-A YOL107WQ12239 342 aa2.19□□□□□ -2.06
VMA9YCL005W-A YLR046CQ12253 270 aa2.19□□□□□ -2.06
VMA9YCL005W-A MED1Q12321 566 aa2.19□□□□□ -2.06
VMA9YCL005W-A GPM3Q12326 303 aa2.19□□□□□ -2.06
VMA9YCL005W-A GTT2Q12390 233 aa2.19□□□□□ -2.06
VMA9YCL005W-A SKS1Q12505 502 aa2.19□□□□□ -2.06
VMA9YCL005W-A EFG1Q3E705 233 aaKnown RBP2.19□□□□□ -2.06
VMA9YCL005W-A HSH49Q99181 213 aaPredicted RBP2.19□□□□□ -2.06
VMA9YCL005W-A RGS2Q99188 309 aa2.19□□□□□ -2.06
VMA9YCL005W-A BCK1Q01389 1478 aa2.19□□□□□ -2.06
VMA9YCL005W-A DUR1,2P32528 1835 aaKnown RBP2.19□□□□□ -2.06
VMA9YCL005W-A SEC7P11075 2009 aaKnown RBP2.18□□□□□ -2.06
VMA9YCL005W-A RAD10P06838 210 aa2.18□□□□□ -2.06
VMA9YCL005W-A SEC53P07283 254 aaKnown RBP2.18□□□□□ -2.06
VMA9YCL005W-A CHO1P08456 276 aa2.18□□□□□ -2.06
VMA9YCL005W-A ZWF1P11412 505 aaKnown RBP2.18□□□□□ -2.06
VMA9YCL005W-A GAL3P13045 520 aa2.18□□□□□ -2.06
VMA9YCL005W-A RPL24BP24000 155 aaKnown RBP2.18□□□□□ -2.06
VMA9YCL005W-A IFM1P25038 676 aa2.18□□□□□ -2.06
VMA9YCL005W-A RNA15P25299 296 aaPredicted RBP2.18□□□□□ -2.06
VMA9YCL005W-A RRT12P25381 491 aa2.18□□□□□ -2.06
VMA9YCL005W-A PUP3P25451 205 aaKnown RBP2.18□□□□□ -2.06
VMA9YCL005W-A PGS1P25578 521 aa2.18□□□□□ -2.06
VMA9YCL005W-A MGT1P26188 188 aa2.18□□□□□ -2.06
VMA9YCL005W-A APE2P32454 952 aaKnown RBP2.18□□□□□ -2.06
VMA9YCL005W-A KRE6P32486 720 aa2.18□□□□□ -2.06
VMA9YCL005W-A SPS19P32573 292 aaKnown RBP2.18□□□□□ -2.06
VMA9YCL005W-A PDC2P32896 925 aa2.18□□□□□ -2.06
VMA9YCL005W-A RPT3P33298 428 aaKnown RBP2.18□□□□□ -2.06
VMA9YCL005W-A SPO23P33757 523 aa2.18□□□□□ -2.06
VMA9YCL005W-A SPT10P35208 640 aa2.18□□□□□ -2.06
VMA9YCL005W-A CBT1P36038 271 aaPredicted RBP2.18□□□□□ -2.06
VMA9YCL005W-A SKG1P36169 355 aa2.18□□□□□ -2.06
VMA9YCL005W-A MRPL3P36516 390 aa2.18□□□□□ -2.06
VMA9YCL005W-A YBR241CP38142 488 aa2.18□□□□□ -2.06
VMA9YCL005W-A YBR032WP38223 100 aa2.18□□□□□ -2.06
VMA9YCL005W-A YBR285WP38354 144 aa2.18□□□□□ -2.06
VMA9YCL005W-A LEU5P38702 357 aa2.18□□□□□ -2.06
VMA9YCL005W-A MSR1P38714 643 aa2.18□□□□□ -2.06
VMA9YCL005W-A NSG1P38837 291 aa2.18□□□□□ -2.06
VMA9YCL005W-A EGD2P38879 174 aaKnown RBP2.18□□□□□ -2.06
VMA9YCL005W-A FLO5P38894 1075 aa2.18□□□□□ -2.06
VMA9YCL005W-A UIP3P39547 235 aa2.18□□□□□ -2.06
VMA9YCL005W-A RBG1P39729 369 aa2.18□□□□□ -2.06
VMA9YCL005W-A RGI1P40043 161 aaPredicted RBP2.18□□□□□ -2.06
VMA9YCL005W-A BUR6P40096 142 aa2.18□□□□□ -2.06
VMA9YCL005W-A YIL161WP40449 235 aaKnown RBP2.18□□□□□ -2.06
VMA9YCL005W-A FMC1P40491 155 aa2.18□□□□□ -2.06
VMA9YCL005W-A YJL107CP42947 387 aa2.18□□□□□ -2.06
VMA9YCL005W-A AGP3P43548 558 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms